FFCP PHASE1:Hg19::chr10:105880010..105880041,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:105880010..105880041,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr10:105880010..105880041,- | |description=CAGE_peak_at_chr10:105880010..105880041,- | ||
|id=chr10:105880010..105880041,- | |id=chr10:105880010..105880041,- | ||
|ontology_enrichment_celltype=CL:0002057!3.54e-70!42;CL:0000860!4.32e-65!45;CL:0002009!2.26e-53!65;CL:0000557!2.27e-48!71;CL:0000766!2.78e-48!76;CL:0002194!1.63e-47!63;CL:0000576!1.63e-47!63;CL:0000040!1.63e-47!63;CL:0000559!1.63e-47!63;CL:0000839!3.32e-42!70;CL:0000763!1.70e-35!112;CL:0000049!1.70e-35!112;CL:0000738!2.17e-35!140;CL:0002087!1.38e-30!119;CL:0002031!4.54e-29!124;CL:0000037!1.99e-27!172;CL:0000566!1.99e-27!172;CL:0000988!1.65e-25!182;CL:0002032!3.18e-25!165;CL:0000837!3.18e-25!165;CL:0000767!1.76e-14!3;CL:0000134!6.93e-11!358;CL:0002320!1.59e-10!365;CL:0001014!4.86e-10!2;CL:0001016!4.86e-10!2;CL:0000219!3.00e-09!390;CL:0000034!1.14e-08!444;CL:0000723!3.31e-08!436;CL:0000048!1.00e-07!430;CL:0000840!3.03e-07!5;CL:0001029!3.03e-07!5;CL:0000842!5.28e-07!3;CL:0000623!9.34e-07!3;CL:0000825!9.34e-07!3 | |ontology_enrichment_celltype=CL:0002057!3.54e-70!42;CL:0000860!4.32e-65!45;CL:0002009!2.26e-53!65;CL:0000557!2.27e-48!71;CL:0000766!2.78e-48!76;CL:0002194!1.63e-47!63;CL:0000576!1.63e-47!63;CL:0000040!1.63e-47!63;CL:0000559!1.63e-47!63;CL:0000839!3.32e-42!70;CL:0000763!1.70e-35!112;CL:0000049!1.70e-35!112;CL:0000738!2.17e-35!140;CL:0002087!1.38e-30!119;CL:0002031!4.54e-29!124;CL:0000037!1.99e-27!172;CL:0000566!1.99e-27!172;CL:0000988!1.65e-25!182;CL:0002032!3.18e-25!165;CL:0000837!3.18e-25!165;CL:0000767!1.76e-14!3;CL:0000134!6.93e-11!358;CL:0002320!1.59e-10!365;CL:0001014!4.86e-10!2;CL:0001016!4.86e-10!2;CL:0000219!3.00e-09!390;CL:0000034!1.14e-08!444;CL:0000723!3.31e-08!436;CL:0000048!1.00e-07!430;CL:0000840!3.03e-07!5;CL:0001029!3.03e-07!5;CL:0000842!5.28e-07!3;CL:0000623!9.34e-07!3;CL:0000825!9.34e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.89e-63;33!CL:0002057;1.89e-63;33!CL:0000473;4.99e-43;39!CL:0000234;4.99e-43;39!CL:0000576;1.51e-38;48!CL:0000766;3.05e-28;69!CL:0002087;3.55e-15;104!CL:0002393;3.29e-14;6!CL:0002397;3.29e-14;6!CL:0000763;1.55e-13;100!CL:0000767;1.20e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.80e-75,42;CL:0002057,2.80e-75,42;CL:0000473,1.54e-65,48;CL:0000234,1.54e-65,48;CL:0002194,6.84e-52,59;CL:0000576,6.84e-52,59;CL:0000040,6.84e-52,59;CL:0000559,6.84e-52,59;CL:0000766,8.68e-52,72;CL:0002009,3.95e-50,61;CL:0000839,3.49e-46,66;CL:0000557,1.83e-45,67;CL:0000763,9.76e-34,108;CL:0000049,9.76e-34,108;CL:0000738,3.07e-26,136;CL:0002087,1.75e-25,115;CL:0002031,2.61e-24,120;CL:0002032,1.00e-21,161;CL:0000837,1.00e-21,161;CL:0000037,1.06e-20,168;CL:0000988,1.69e-19,177;CL:0000767,1.20e-12,3;CL:0002393,1.14e-09,9;CL:0002397,1.14e-09,9;CL:0000134,3.57e-08,354;CL:0002320,5.96e-08,361;CL:0000219,3.65e-07,386;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.07e-51;42!CL:0000049;2.38e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.97e-42!80;UBERON:0001474!7.03e-39!86;UBERON:0002390!6.93e-37!102;UBERON:0003061!6.93e-37!102;UBERON:0004765!1.02e-34!101;UBERON:0001434!1.02e-34!101;UBERON:0002193!5.30e-33!112;UBERON:0002405!1.72e-27!115;UBERON:0002204!2.15e-18!167;UBERON:0003081!5.20e-15!216;UBERON:0002384!4.96e-10!375 | |ontology_enrichment_uberon=UBERON:0002371!2.97e-42!80;UBERON:0001474!7.03e-39!86;UBERON:0002390!6.93e-37!102;UBERON:0003061!6.93e-37!102;UBERON:0004765!1.02e-34!101;UBERON:0001434!1.02e-34!101;UBERON:0002193!5.30e-33!112;UBERON:0002405!1.72e-27!115;UBERON:0002204!2.15e-18!167;UBERON:0003081!5.20e-15!216;UBERON:0002384!4.96e-10!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.93e-40,76;UBERON:0001474,9.55e-37,82;UBERON:0004765,2.87e-33,90;UBERON:0002405,4.07e-32,93;UBERON:0002390,2.37e-30,98;UBERON:0003061,2.37e-30,98;UBERON:0001434,1.08e-29,100;UBERON:0002193,2.64e-27,108;UBERON:0002204,1.10e-16,167;UBERON:0003081,3.31e-13,203;UBERON:0002384,1.20e-07,371;UBERON:0000926,2.05e-07,315;UBERON:0004120,2.05e-07,315;UBERON:0006603,2.05e-07,315 | |||
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|short_description=p@chr10:105880010..105880041,- | |short_description=p@chr10:105880010..105880041,- | ||
}} | }} |
Latest revision as of 10:06, 23 July 2015
Short description: | p@chr10:105880010..105880041, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:105880010..105880041, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.80e-75 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.80e-75 | 42 |
defensive cell | 1.54e-65 | 48 |
phagocyte | 1.54e-65 | 48 |
monopoietic cell | 6.84e-52 | 59 |
monocyte | 6.84e-52 | 59 |
monoblast | 6.84e-52 | 59 |
promonocyte | 6.84e-52 | 59 |
myeloid leukocyte | 8.68e-52 | 72 |
macrophage dendritic cell progenitor | 3.95e-50 | 61 |
myeloid lineage restricted progenitor cell | 3.49e-46 | 66 |
granulocyte monocyte progenitor cell | 1.83e-45 | 67 |
myeloid cell | 9.76e-34 | 108 |
common myeloid progenitor | 9.76e-34 | 108 |
leukocyte | 3.07e-26 | 136 |
nongranular leukocyte | 1.75e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 2.61e-24 | 120 |
hematopoietic oligopotent progenitor cell | 1.00e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.00e-21 | 161 |
hematopoietic stem cell | 1.06e-20 | 168 |
hematopoietic cell | 1.69e-19 | 177 |
basophil | 1.20e-12 | 3 |
intermediate monocyte | 1.14e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.14e-09 | 9 |
mesenchymal cell | 3.57e-08 | 354 |
connective tissue cell | 5.96e-08 | 361 |
motile cell | 3.65e-07 | 386 |
stem cell | 9.09e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.93e-40 | 76 |
bone element | 9.55e-37 | 82 |
skeletal element | 2.87e-33 | 90 |
immune system | 4.07e-32 | 93 |
hematopoietic system | 2.37e-30 | 98 |
blood island | 2.37e-30 | 98 |
skeletal system | 1.08e-29 | 100 |
hemolymphoid system | 2.64e-27 | 108 |
musculoskeletal system | 1.10e-16 | 167 |
lateral plate mesoderm | 3.31e-13 | 203 |
connective tissue | 1.20e-07 | 371 |
mesoderm | 2.05e-07 | 315 |
mesoderm-derived structure | 2.05e-07 | 315 |
presumptive mesoderm | 2.05e-07 | 315 |