FFCP PHASE1:Hg19::chr10:28367218..28367230,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:28367218..28367230,+
|short_description=p@chr10:28367218..28367230,+
|description=CAGE_peak_at_chr10:28367218..28367230,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:28367218..28367230,+ | |||
|coexpression_cluster_id=C429 | |||
|description=CAGE_peak_at_chr10:28367218..28367230,+ | |||
|id=chr10:28367218..28367230,+ | |||
|ontology_enrichment_celltype=CL:0002149!1.12e-08!6;CL:0002255!1.12e-08!6;CL:0002620!1.75e-07!23;CL:0000306!2.24e-07!4;CL:0002222!2.24e-07!4;CL:0002224!2.24e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000243;6.71e-14;15!CL:0000125;6.71e-14;15!CL:0000095;1.64e-12;17!CL:0002319;5.29e-09;25!CL:0000306;1.92e-07;4!CL:0002222;1.92e-07;4!CL:0002224;1.92e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,6.71e-14,15;CL:0000125,6.71e-14,15;CL:0000030,6.71e-14,15;CL:0000339,6.71e-14,15;CL:0000095,1.64e-12,17;CL:0000123,1.64e-12,17;CL:0002319,5.29e-09,25;CL:0000306,1.92e-07,4;CL:0002222,1.92e-07,4;CL:0002224,1.92e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006238;4.65e-21;10!CL:0000339;6.71e-14;15 | |||
|ontology_enrichment_disease=DOID:120!6.28e-14!27;DOID:193!8.81e-13!29;DOID:3001!1.12e-08!6;DOID:14566!5.55e-08!239;DOID:162!1.23e-07!235;DOID:0050687!2.65e-07!143;DOID:4468!7.44e-07!2;DOID:305!8.28e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3093;2.26e-19;11!DOID:3307;1.37e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,2.26e-19,11;DOID:3307,1.21e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0005156!1.81e-09!59;UBERON:0000990!1.81e-09!59;UBERON:0003100!2.34e-08!41;UBERON:0001737!3.26e-08!9;UBERON:0003134!6.57e-08!37;UBERON:0000474!6.57e-08!37;UBERON:0010077!2.24e-07!4;UBERON:0005389!2.24e-07!4;UBERON:0000484!2.24e-07!4;UBERON:0002546!2.24e-07!4;UBERON:0000965!2.24e-07!4;UBERON:0001803!2.24e-07!4;UBERON:0003073!2.24e-07!4;UBERON:0005426!2.24e-07!4;UBERON:0001557!5.33e-07!19;UBERON:0003133!8.81e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;5.93e-26;1!UBERON:0009842;5.93e-26;1!UBERON:0003704;5.93e-26;1!UBERON:0001171;5.93e-26;1!UBERON:0001172;5.93e-26;1!UBERON:0001280;1.41e-09;3!UBERON:0004647;1.41e-09;3!UBERON:0001723;1.67e-09;3!UBERON:0001033;1.67e-09;3!UBERON:0002394;1.69e-07;4!UBERON:0003928;1.69e-07;4!UBERON:0010077;1.92e-07;4!UBERON:0005389;1.92e-07;4!UBERON:0000484;1.92e-07;4!UBERON:0000965;1.92e-07;4!UBERON:0001803;1.92e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,5.93e-26,1;UBERON:0009842,5.93e-26,1;UBERON:0003704,5.93e-26,1;UBERON:0001171,5.93e-26,1;UBERON:0001172,5.93e-26,1;UBERON:0001280,1.41e-09,3;UBERON:0004647,1.41e-09,3;UBERON:0005171,1.41e-09,3;UBERON:0001723,1.81e-09,3;UBERON:0001033,1.81e-09,3;UBERON:0010056,1.81e-09,3;UBERON:0010077,1.92e-07,4;UBERON:0005389,1.92e-07,4;UBERON:0000484,1.92e-07,4;UBERON:0002546,1.92e-07,4;UBERON:0000965,1.92e-07,4;UBERON:0001803,1.92e-07,4;UBERON:0003073,1.92e-07,4;UBERON:0005426,1.92e-07,4 | |||
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| ||
|short_description=p@chr10:28367218..28367230,+ | |||
}} | }} |
Latest revision as of 12:57, 23 July 2015
Short description: | p@chr10:28367218..28367230, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:28367218..28367230, + |
Coexpression cluster: | C429_anaplastic_Mast_clear_Neutrophils_squamous_Eosinophils_oral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 6.71e-14 | 15 |
glial cell | 6.71e-14 | 15 |
glioblast | 6.71e-14 | 15 |
glioblast (sensu Vertebrata) | 6.71e-14 | 15 |
neuron associated cell | 1.64e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 1.64e-12 | 17 |
neural cell | 5.29e-09 | 25 |
crystallin accumulating cell | 1.92e-07 | 4 |
vertebrate lens cell | 1.92e-07 | 4 |
lens epithelial cell | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 5.93e-26 | 1 |
acinus | 5.93e-26 | 1 |
intrahepatic bile duct | 5.93e-26 | 1 |
portal lobule | 5.93e-26 | 1 |
hepatic acinus | 5.93e-26 | 1 |
liver parenchyma | 1.41e-09 | 3 |
liver lobule | 1.41e-09 | 3 |
hepatic duct | 1.41e-09 | 3 |
tongue | 1.81e-09 | 3 |
gustatory system | 1.81e-09 | 3 |
future tongue | 1.81e-09 | 3 |
cuboidal epithelium | 1.92e-07 | 4 |
transparent eye structure | 1.92e-07 | 4 |
simple cuboidal epithelium | 1.92e-07 | 4 |
cranial placode | 1.92e-07 | 4 |
lens of camera-type eye | 1.92e-07 | 4 |
epithelium of lens | 1.92e-07 | 4 |
lens placode | 1.92e-07 | 4 |
lens vesicle | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.26e-19 | 11 |
teratoma | 1.21e-13 | 2 |