FFCP PHASE1:Hg19::chr10:32040654..32040692,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:32040654..32040692,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr10:32040654..32040692,+ | |description=CAGE_peak_at_chr10:32040654..32040692,+ | ||
|id=chr10:32040654..32040692,+ | |id=chr10:32040654..32040692,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.15e-45!42;CL:0000860!6.53e-42!45;CL:0000766!3.42e-40!76;CL:0000839!6.47e-37!70;CL:0000557!2.50e-36!71;CL:0002194!1.51e-34!63;CL:0000576!1.51e-34!63;CL:0000040!1.51e-34!63;CL:0000559!1.51e-34!63;CL:0002009!2.38e-33!65;CL:0000738!1.45e-31!140;CL:0002087!5.71e-26!119;CL:0000763!1.43e-25!112;CL:0000049!1.43e-25!112;CL:0000037!1.64e-24!172;CL:0000566!1.64e-24!172;CL:0000988!8.20e-23!182;CL:0002031!1.95e-22!124;CL:0002032!1.23e-18!165;CL:0000837!1.23e-18!165;CL:0000842!5.55e-17!3;CL:0000224!7.30e-13!4;CL:0000134!3.26e-09!358;CL:0002320!6.60e-09!365;CL:0000080!1.01e-08!6;CL:0000767!3.31e-08!3;CL:0000784!5.80e-08!3;CL:0000219!7.95e-08!390;CL:0000623!9.08e-08!3;CL:0000825!9.08e-08!3 | |ontology_enrichment_celltype=CL:0002057!3.15e-45!42;CL:0000860!6.53e-42!45;CL:0000766!3.42e-40!76;CL:0000839!6.47e-37!70;CL:0000557!2.50e-36!71;CL:0002194!1.51e-34!63;CL:0000576!1.51e-34!63;CL:0000040!1.51e-34!63;CL:0000559!1.51e-34!63;CL:0002009!2.38e-33!65;CL:0000738!1.45e-31!140;CL:0002087!5.71e-26!119;CL:0000763!1.43e-25!112;CL:0000049!1.43e-25!112;CL:0000037!1.64e-24!172;CL:0000566!1.64e-24!172;CL:0000988!8.20e-23!182;CL:0002031!1.95e-22!124;CL:0002032!1.23e-18!165;CL:0000837!1.23e-18!165;CL:0000842!5.55e-17!3;CL:0000224!7.30e-13!4;CL:0000134!3.26e-09!358;CL:0002320!6.60e-09!365;CL:0000080!1.01e-08!6;CL:0000767!3.31e-08!3;CL:0000784!5.80e-08!3;CL:0000219!7.95e-08!390;CL:0000623!9.08e-08!3;CL:0000825!9.08e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002393;5.92e-38;6!CL:0002397;5.92e-38;6!CL:0000226;9.10e-34;3!CL:0000842;9.10e-34;3!CL:0000767;1.67e-09;3!CL:0000576;2.44e-09;48!CL:0000766;1.37e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000226,7.70e-34,3;CL:0000842,7.70e-34,3;CL:0002393,1.27e-25,9;CL:0002397,1.27e-25,9;CL:0000860,4.96e-15,42;CL:0002057,4.96e-15,42;CL:0000473,3.45e-13,48;CL:0000234,3.45e-13,48;CL:0000766,2.48e-12,72;CL:0000738,1.45e-11,136;CL:0002194,1.34e-10,59;CL:0000576,1.34e-10,59;CL:0000040,1.34e-10,59;CL:0000559,1.34e-10,59;CL:0002087,1.68e-10,115;CL:0002009,2.89e-10,61;CL:0000839,1.63e-09,66;CL:0000767,1.67e-09,3;CL:0000557,2.23e-09,67;CL:0000037,2.31e-09,168;CL:0000988,6.97e-09,177;CL:0000763,2.81e-08,108;CL:0000049,2.81e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;3.97e-10;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.06e-31!80;UBERON:0002390!3.38e-31!102;UBERON:0003061!3.38e-31!102;UBERON:0001474!3.82e-29!86;UBERON:0002193!6.46e-28!112;UBERON:0004765!4.50e-24!101;UBERON:0001434!4.50e-24!101;UBERON:0002405!1.53e-22!115;UBERON:0002204!1.55e-12!167;UBERON:0003081!9.96e-12!216;UBERON:0002384!1.73e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.44e-07;15!UBERON:0000179;1.44e-07;15!UBERON:0000463;1.44e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.63e-12,98;UBERON:0003061,2.63e-12,98;UBERON:0002193,3.54e-11,108;UBERON:0002371,2.65e-08,76;UBERON:0001474,1.03e-07,82;UBERON:0000178,1.40e-07,15;UBERON:0000179,1.40e-07,15;UBERON:0000463,1.40e-07,15;UBERON:0004765,4.76e-07,90;UBERON:0002405,7.92e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,1.23852898652861,0,0,0,0,0,0,11.0799081706375,9.82667792603694,2.82114131930607,0,0,0.257575567634187,0,0,0.242584061187816,0.232429036905685,0.411167888021826,0,0,0.256160706529101,0.236482229888585,0,0,0,0.941211697713023,0.545812300115692,0.449446968890169,2.44867113896722,0.962787081228281,0,0,0.199463657621632,0,1.16083695451434,0.56738522469114,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,4.31428401637234,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,1.23852898652861,0,0,0,0,0,0,11.0799081706375,9.82667792603694,2.82114131930607,0,0,0.257575567634187,0,0,0.242584061187816,0.232429036905685,0.411167888021826,0,0,0.256160706529101,0.236482229888585,0,0,0,0.941211697713023,0.545812300115692,0.449446968890169,2.44867113896722,0.962787081228281,0,0,0.199463657621632,0,1.16083695451434,0.56738522469114,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,4.31428401637234,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:32040654..32040692,+ | |short_description=p@chr10:32040654..32040692,+ | ||
}} | }} |
Latest revision as of 13:14, 23 July 2015
Short description: | p@chr10:32040654..32040692, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:32040654..32040692, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
single nucleate cell | 7.70e-34 | 3 |
mononuclear cell | 7.70e-34 | 3 |
intermediate monocyte | 1.27e-25 | 9 |
CD14-positive, CD16-positive monocyte | 1.27e-25 | 9 |
classical monocyte | 4.96e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.96e-15 | 42 |
defensive cell | 3.45e-13 | 48 |
phagocyte | 3.45e-13 | 48 |
myeloid leukocyte | 2.48e-12 | 72 |
leukocyte | 1.45e-11 | 136 |
monopoietic cell | 1.34e-10 | 59 |
monocyte | 1.34e-10 | 59 |
monoblast | 1.34e-10 | 59 |
promonocyte | 1.34e-10 | 59 |
nongranular leukocyte | 1.68e-10 | 115 |
macrophage dendritic cell progenitor | 2.89e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.63e-09 | 66 |
basophil | 1.67e-09 | 3 |
granulocyte monocyte progenitor cell | 2.23e-09 | 67 |
hematopoietic stem cell | 2.31e-09 | 168 |
hematopoietic cell | 6.97e-09 | 177 |
myeloid cell | 2.81e-08 | 108 |
common myeloid progenitor | 2.81e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.63e-12 | 98 |
blood island | 2.63e-12 | 98 |
hemolymphoid system | 3.54e-11 | 108 |
bone marrow | 2.65e-08 | 76 |
bone element | 1.03e-07 | 82 |
blood | 1.40e-07 | 15 |
haemolymphatic fluid | 1.40e-07 | 15 |
organism substance | 1.40e-07 | 15 |
skeletal element | 4.76e-07 | 90 |
immune system | 7.92e-07 | 93 |