FFCP PHASE1:Hg19::chr10:33405656..33405667,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-56bp_to_ENST00000414308_5end | |association_with_transcript=-56bp_to_ENST00000414308_5end | ||
|cluster_id=chr10:33405656..33405667,- | |||
|coexpression_cluster_id=C103 | |coexpression_cluster_id=C103 | ||
|description=CAGE_peak_3_at_ENST00000414308_5end | |description=CAGE_peak_3_at_ENST00000414308_5end | ||
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|ontology_enrichment_celltype=CL:0000791!7.73e-50!18;CL:0000789!7.73e-50!18;CL:0002420!7.73e-50!18;CL:0002419!7.73e-50!18;CL:0000790!7.73e-50!18;CL:0000084!9.44e-40!25;CL:0000827!9.44e-40!25;CL:0000838!1.26e-33!52;CL:0000542!6.94e-33!53;CL:0000051!6.94e-33!53;CL:0000625!7.02e-30!11;CL:0000624!3.44e-25!6;CL:0002087!4.02e-20!119;CL:0000738!5.53e-19!140;CL:0002031!1.28e-14!124;CL:0000037!3.69e-14!172;CL:0000566!3.69e-14!172;CL:0000898!2.06e-13!3;CL:0000988!5.28e-13!182;CL:0000842!2.67e-12!3;CL:0002032!1.39e-11!165;CL:0000837!1.39e-11!165;CL:0000815!1.05e-09!2;CL:0000792!1.05e-09!2;CL:0002677!1.05e-09!2;CL:0000224!2.41e-09!4 | |ontology_enrichment_celltype=CL:0000791!7.73e-50!18;CL:0000789!7.73e-50!18;CL:0002420!7.73e-50!18;CL:0002419!7.73e-50!18;CL:0000790!7.73e-50!18;CL:0000084!9.44e-40!25;CL:0000827!9.44e-40!25;CL:0000838!1.26e-33!52;CL:0000542!6.94e-33!53;CL:0000051!6.94e-33!53;CL:0000625!7.02e-30!11;CL:0000624!3.44e-25!6;CL:0002087!4.02e-20!119;CL:0000738!5.53e-19!140;CL:0002031!1.28e-14!124;CL:0000037!3.69e-14!172;CL:0000566!3.69e-14!172;CL:0000898!2.06e-13!3;CL:0000988!5.28e-13!182;CL:0000842!2.67e-12!3;CL:0002032!1.39e-11!165;CL:0000837!1.39e-11!165;CL:0000815!1.05e-09!2;CL:0000792!1.05e-09!2;CL:0002677!1.05e-09!2;CL:0000224!2.41e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.63e-64;18!CL:0000789;1.63e-64;18!CL:0002419;1.63e-64;18!CL:0000084;6.67e-54;25!CL:0000625;1.57e-36;11!CL:0000624;1.56e-34;6!CL:0000542;3.72e-20;53!CL:0000815;7.41e-18;2!CL:0000792;7.41e-18;2!CL:0002677;7.41e-18;2!CL:0000898;3.18e-12;3 | |ontology_enrichment_celltype_v019=CL:0000791;1.63e-64;18!CL:0000789;1.63e-64;18!CL:0002419;1.63e-64;18!CL:0000084;6.67e-54;25!CL:0000625;1.57e-36;11!CL:0000624;1.56e-34;6!CL:0000542;3.72e-20;53!CL:0000815;7.41e-18;2!CL:0000792;7.41e-18;2!CL:0002677;7.41e-18;2!CL:0000898;3.18e-12;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.35e-64,18;CL:0000789,1.35e-64,18;CL:0002420,1.35e-64,18;CL:0002419,1.35e-64,18;CL:0000790,1.35e-64,18;CL:0000084,7.47e-54,25;CL:0000827,7.47e-54,25;CL:0000838,5.46e-38,52;CL:0000542,3.20e-37,53;CL:0000051,3.20e-37,53;CL:0000625,1.41e-36,11;CL:0000624,1.41e-34,6;CL:0000815,8.08e-18,2;CL:0000792,8.08e-18,2;CL:0002677,8.08e-18,2;CL:0002087,1.65e-15,115;CL:0002031,9.44e-15,120;CL:0000738,1.06e-12,136;CL:0000898,3.37e-12,3;CL:0002032,2.66e-10,161;CL:0000837,2.66e-10,161;CL:0000037,9.30e-10,168;CL:0000988,4.03e-09,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.63e-64;18!CL:0000051;3.72e-20;53 | |ontology_enrichment_development_v019=CL:0000790;1.63e-64;18!CL:0000051;3.72e-20;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.86e-20!15;UBERON:0000179!3.86e-20!15;UBERON:0000463!3.86e-20!15 | |ontology_enrichment_uberon=UBERON:0000178!3.86e-20!15;UBERON:0000179!3.86e-20!15;UBERON:0000463!3.86e-20!15 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p3@ENST00000414308 | |short_description=p3@ENST00000414308 | ||
}} | }} |
Latest revision as of 13:21, 23 July 2015
Short description: | p3@ENST00000414308 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000414308_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | -56bp_to_ENST00000414308_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.35e-64 | 18 |
alpha-beta T cell | 1.35e-64 | 18 |
immature T cell | 1.35e-64 | 18 |
mature T cell | 1.35e-64 | 18 |
immature alpha-beta T cell | 1.35e-64 | 18 |
T cell | 7.47e-54 | 25 |
pro-T cell | 7.47e-54 | 25 |
lymphoid lineage restricted progenitor cell | 5.46e-38 | 52 |
lymphocyte | 3.20e-37 | 53 |
common lymphoid progenitor | 3.20e-37 | 53 |
CD8-positive, alpha-beta T cell | 1.41e-36 | 11 |
CD4-positive, alpha-beta T cell | 1.41e-34 | 6 |
regulatory T cell | 8.08e-18 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.08e-18 | 2 |
naive regulatory T cell | 8.08e-18 | 2 |
nongranular leukocyte | 1.65e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 9.44e-15 | 120 |
leukocyte | 1.06e-12 | 136 |
naive T cell | 3.37e-12 | 3 |
hematopoietic oligopotent progenitor cell | 2.66e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.66e-10 | 161 |
hematopoietic stem cell | 9.30e-10 | 168 |
hematopoietic cell | 4.03e-09 | 177 |