FFCP PHASE1:Hg19::chr10:3790567..3790572,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:3790567..3790572,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:3790567..3790572,- | |||
|id=chr10:3790567..3790572,- | |||
|ontology_enrichment_celltype=CL:0002057!4.24e-25!42;CL:0000860!6.85e-23!45;CL:0002194!3.72e-15!63;CL:0000576!3.72e-15!63;CL:0000040!3.72e-15!63;CL:0000559!3.72e-15!63;CL:0002009!1.84e-14!65;CL:0000839!4.59e-14!70;CL:0000557!9.27e-14!71;CL:0000766!2.09e-13!76;CL:0002087!1.71e-12!119;CL:0002031!9.22e-11!124;CL:0000738!1.35e-10!140;CL:0000763!3.40e-08!112;CL:0000049!3.40e-08!112;CL:0000037!4.57e-08!172;CL:0000566!4.57e-08!172;CL:0002032!1.33e-07!165;CL:0000837!1.33e-07!165;CL:0000988!4.27e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.17e-15;6!CL:0002397;1.17e-15;6!CL:0000860;6.27e-13;33!CL:0002057;6.27e-13;33!CL:0000576;9.26e-12;48!CL:0000766;4.87e-10;69!CL:0000473;2.93e-09;39!CL:0000234;2.93e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.85e-22,42;CL:0002057,1.85e-22,42;CL:0000473,1.76e-19,48;CL:0000234,1.76e-19,48;CL:0002194,2.63e-15,59;CL:0000576,2.63e-15,59;CL:0000040,2.63e-15,59;CL:0000559,2.63e-15,59;CL:0002009,9.10e-15,61;CL:0000839,1.47e-13,66;CL:0000557,2.44e-13,67;CL:0000766,2.50e-12,72;CL:0002393,1.43e-10,9;CL:0002397,1.43e-10,9;CL:0000763,8.84e-08,108;CL:0000049,8.84e-08,108;CL:0002087,3.19e-07,115;CL:0002031,7.28e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.73e-13;42!UBERON:0000358;1.60e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.26e-11!80;UBERON:0001474!5.51e-11!86;UBERON:0002390!6.76e-09!102;UBERON:0003061!6.76e-09!102;UBERON:0004765!2.86e-08!101;UBERON:0001434!2.86e-08!101;UBERON:0002193!1.87e-07!112;UBERON:0002405!3.06e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;1.60e-11;1!UBERON:0003703;1.60e-11;1!UBERON:0001174;1.60e-11;1!UBERON:0004914;1.60e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.30e-11,76;UBERON:0004913,1.97e-11,1;UBERON:0003703,1.97e-11,1;UBERON:0001174,1.97e-11,1;UBERON:0004914,1.97e-11,1;UBERON:0001474,1.14e-10,82;UBERON:0004765,1.32e-09,90;UBERON:0002405,2.98e-09,93;UBERON:0002390,1.03e-08,98;UBERON:0003061,1.03e-08,98;UBERON:0001434,1.64e-08,100;UBERON:0002193,8.84e-08,108 | |||
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| ||
|short_description=p@chr10:3790567..3790572,- | |||
}} | }} |
Latest revision as of 13:29, 23 July 2015
Short description: | p@chr10:3790567..3790572, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3790567..3790572, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.85e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.85e-22 | 42 |
defensive cell | 1.76e-19 | 48 |
phagocyte | 1.76e-19 | 48 |
monopoietic cell | 2.63e-15 | 59 |
monocyte | 2.63e-15 | 59 |
monoblast | 2.63e-15 | 59 |
promonocyte | 2.63e-15 | 59 |
macrophage dendritic cell progenitor | 9.10e-15 | 61 |
myeloid lineage restricted progenitor cell | 1.47e-13 | 66 |
granulocyte monocyte progenitor cell | 2.44e-13 | 67 |
myeloid leukocyte | 2.50e-12 | 72 |
intermediate monocyte | 1.43e-10 | 9 |
CD14-positive, CD16-positive monocyte | 1.43e-10 | 9 |
myeloid cell | 8.84e-08 | 108 |
common myeloid progenitor | 8.84e-08 | 108 |
nongranular leukocyte | 3.19e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 7.28e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.30e-11 | 76 |
hepatopancreatic ampulla | 1.97e-11 | 1 |
extrahepatic bile duct | 1.97e-11 | 1 |
common bile duct | 1.97e-11 | 1 |
duodenal papilla | 1.97e-11 | 1 |
bone element | 1.14e-10 | 82 |
skeletal element | 1.32e-09 | 90 |
immune system | 2.98e-09 | 93 |
hematopoietic system | 1.03e-08 | 98 |
blood island | 1.03e-08 | 98 |
skeletal system | 1.64e-08 | 100 |
hemolymphoid system | 8.84e-08 | 108 |