FFCP PHASE1:Hg19::chr10:3799978..3799981,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:3799978..3799981,+ | |||
|coexpression_cluster_id=C151 | |coexpression_cluster_id=C151 | ||
|description=CAGE_peak_at_chr10:3799978..3799981,+ | |description=CAGE_peak_at_chr10:3799978..3799981,+ | ||
|id=chr10:3799978..3799981,+ | |id=chr10:3799978..3799981,+ | ||
|ontology_enrichment_celltype=CL:0000860;5.07e-24;33!CL:0002057;5.07e-24;33!CL:0000623;1.59e-23;3!CL:0000473;1.43e-16;39!CL:0000234;1.43e-16;39!CL:0000576;5.12e-12;48!CL:0002087;2.41e-11;104!CL:0000766;1.74e-07;69!CL:0000791;4.06e-07;18!CL:0000789;4.06e-07;18!CL:0002419;4.06e-07;18!CL:0000625;5.31e-07;11 | |ontology_enrichment_celltype=CL:0000738!1.20e-29!140;CL:0002087!4.08e-25!119;CL:0002031!7.46e-24!124;CL:0000037!8.06e-22!172;CL:0000566!8.06e-22!172;CL:0000988!4.29e-21!182;CL:0002057!4.35e-21!42;CL:0002032!1.12e-19!165;CL:0000837!1.12e-19!165;CL:0000860!2.65e-19!45;CL:0002009!9.04e-16!65;CL:0000557!2.75e-15!71;CL:0000766!1.01e-13!76;CL:0002194!2.82e-13!63;CL:0000576!2.82e-13!63;CL:0000040!2.82e-13!63;CL:0000559!2.82e-13!63;CL:0000839!1.21e-12!70;CL:0000763!4.23e-11!112;CL:0000049!4.23e-11!112;CL:0000623!1.96e-09!3;CL:0000825!1.96e-09!3;CL:0000838!3.85e-09!52;CL:0000542!6.76e-09!53;CL:0000051!6.76e-09!53;CL:0000453!8.23e-09!5;CL:0000842!6.33e-08!3;CL:0000990!4.64e-07!8;CL:0000134!5.73e-07!358;CL:0000080!9.77e-07!6 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;5.07e-24;33!CL:0002057;5.07e-24;33!CL:0000623;1.59e-23;3!CL:0000473;1.43e-16;39!CL:0000234;1.43e-16;39!CL:0000576;5.12e-12;48!CL:0002087;2.41e-11;104!CL:0000766;1.74e-07;69!CL:0000791;4.06e-07;18!CL:0000789;4.06e-07;18!CL:0002419;4.06e-07;18!CL:0000625;5.31e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.61e-24,42;CL:0002057,1.61e-24,42;CL:0000623,6.77e-24,3;CL:0000825,6.77e-24,3;CL:0002031,4.04e-22,120;CL:0000473,3.42e-21,48;CL:0000234,3.42e-21,48;CL:0002087,9.58e-21,115;CL:0000738,4.05e-19,136;CL:0002009,8.06e-19,61;CL:0000557,5.93e-17,67;CL:0002194,1.56e-16,59;CL:0000576,1.56e-16,59;CL:0000040,1.56e-16,59;CL:0000559,1.56e-16,59;CL:0002032,1.30e-15,161;CL:0000837,1.30e-15,161;CL:0000037,8.15e-15,168;CL:0000839,1.38e-14,66;CL:0000988,6.99e-14,177;CL:0000766,3.27e-13,72;CL:0000763,1.08e-09,108;CL:0000049,1.08e-09,108;CL:0000791,4.06e-07,18;CL:0000789,4.06e-07,18;CL:0002420,4.06e-07,18;CL:0002419,4.06e-07,18;CL:0000790,4.06e-07,18;CL:0000625,5.31e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.21e-15;42!CL:0000790;4.06e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.34e-14!102;UBERON:0003061!6.34e-14!102;UBERON:0002371!7.23e-13!80;UBERON:0002193!5.10e-12!112;UBERON:0001474!1.53e-11!86;UBERON:0004765!7.18e-10!101;UBERON:0001434!7.18e-10!101;UBERON:0002405!6.12e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.07e-14,76;UBERON:0001474,1.82e-13,82;UBERON:0004765,4.47e-12,90;UBERON:0002405,1.29e-11,93;UBERON:0002390,6.55e-11,98;UBERON:0003061,6.55e-11,98;UBERON:0001434,1.20e-10,100;UBERON:0002193,1.08e-09,108 | |||
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| ||
|short_description=p@chr10:3799978..3799981,+ | |short_description=p@chr10:3799978..3799981,+ | ||
}} | }} |
Latest revision as of 13:29, 23 July 2015
Short description: | p@chr10:3799978..3799981, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3799978..3799981, + |
Coexpression cluster: | C151_CD14_Natural_Basophils_CD8_Eosinophils_CD4_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.61e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.61e-24 | 42 |
natural killer cell | 6.77e-24 | 3 |
pro-NK cell | 6.77e-24 | 3 |
hematopoietic lineage restricted progenitor cell | 4.04e-22 | 120 |
defensive cell | 3.42e-21 | 48 |
phagocyte | 3.42e-21 | 48 |
nongranular leukocyte | 9.58e-21 | 115 |
leukocyte | 4.05e-19 | 136 |
macrophage dendritic cell progenitor | 8.06e-19 | 61 |
granulocyte monocyte progenitor cell | 5.93e-17 | 67 |
monopoietic cell | 1.56e-16 | 59 |
monocyte | 1.56e-16 | 59 |
monoblast | 1.56e-16 | 59 |
promonocyte | 1.56e-16 | 59 |
hematopoietic oligopotent progenitor cell | 1.30e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.30e-15 | 161 |
hematopoietic stem cell | 8.15e-15 | 168 |
myeloid lineage restricted progenitor cell | 1.38e-14 | 66 |
hematopoietic cell | 6.99e-14 | 177 |
myeloid leukocyte | 3.27e-13 | 72 |
myeloid cell | 1.08e-09 | 108 |
common myeloid progenitor | 1.08e-09 | 108 |
mature alpha-beta T cell | 4.06e-07 | 18 |
alpha-beta T cell | 4.06e-07 | 18 |
immature T cell | 4.06e-07 | 18 |
mature T cell | 4.06e-07 | 18 |
immature alpha-beta T cell | 4.06e-07 | 18 |
CD8-positive, alpha-beta T cell | 5.31e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.07e-14 | 76 |
bone element | 1.82e-13 | 82 |
skeletal element | 4.47e-12 | 90 |
immune system | 1.29e-11 | 93 |
hematopoietic system | 6.55e-11 | 98 |
blood island | 6.55e-11 | 98 |
skeletal system | 1.20e-10 | 100 |
hemolymphoid system | 1.08e-09 | 108 |