FFCP PHASE1:Hg19::chr10:43187153..43187192,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000411439_5end | |association_with_transcript=0bp_to_ENST00000411439_5end | ||
|cluster_id=chr10:43187153..43187192,- | |||
|description=CAGE_peak_1_at_ENST00000411439_5end | |description=CAGE_peak_1_at_ENST00000411439_5end | ||
|id=chr10:43187153..43187192,- | |id=chr10:43187153..43187192,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000159;2.43e-08;2!CL:0000054;1.26e-07;2!CL:0000137;1.26e-07;2!CL:0000092;1.26e-07;2!CL:0000333;2.19e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000159,2.56e-08,2;CL:0000054,1.24e-07,2;CL:0000137,1.24e-07,2;CL:0000092,1.24e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.20e-09;29 | |||
|ontology_enrichment_disease=DOID:162!3.97e-21!235;DOID:14566!3.37e-20!239;DOID:0050687!1.24e-19!143;DOID:305!1.27e-11!106;DOID:0050686!1.28e-07!137;DOID:1325!1.54e-07!7;DOID:3904!1.54e-07!7;DOID:5409!5.40e-07!4 | |ontology_enrichment_disease=DOID:162!3.97e-21!235;DOID:14566!3.37e-20!239;DOID:0050687!1.24e-19!143;DOID:305!1.27e-11!106;DOID:0050686!1.28e-07!137;DOID:1325!1.54e-07!7;DOID:3904!1.54e-07!7;DOID:5409!5.40e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:5409;1.41e-08;4!DOID:200;1.26e-07;2!DOID:4305;1.26e-07;2!DOID:0050615;1.61e-07;16!DOID:0050687;3.51e-07;143!DOID:3095;3.84e-07;22!DOID:2994;3.84e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.76e-23,235;DOID:14566,1.42e-22,239;DOID:0050687,3.35e-21,143;DOID:305,1.33e-12,106;DOID:5409,1.29e-08,4;DOID:0050686,1.45e-08,137;DOID:200,1.24e-07,2;DOID:4305,1.24e-07,2;DOID:0050615,1.51e-07,16;DOID:3095,3.84e-07,22;DOID:2994,3.84e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.29e-12!9;UBERON:0008947!1.92e-07!38;UBERON:0003258!1.92e-07!38;UBERON:0001557!2.34e-07!19;UBERON:0000072!4.86e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.23e-08;9!UBERON:0001557;1.23e-08;9!UBERON:0000013;2.19e-07;5!UBERON:0002410;2.19e-07;5!UBERON:0000007;2.69e-07;2!UBERON:0000072;4.76e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.16e-08,9;UBERON:0000013,2.17e-07,5;UBERON:0002410,2.17e-07,5;UBERON:0000007,2.51e-07,2;UBERON:0008947,5.96e-07,38;UBERON:0003258,5.96e-07,38 | |||
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| ||
|short_description=p1@ENST00000411439 | |short_description=p1@ENST00000411439 | ||
}} | }} |
Latest revision as of 13:42, 23 July 2015
Short description: | p1@ENST00000411439 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000411439_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000411439_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 2.56e-08 | 2 |
bone matrix secreting cell | 1.24e-07 | 2 |
osteocyte | 1.24e-07 | 2 |
osteoclast | 1.24e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.16e-08 | 9 |
sympathetic nervous system | 2.17e-07 | 5 |
autonomic nervous system | 2.17e-07 | 5 |
pituitary gland | 2.51e-07 | 2 |
respiratory primordium | 5.96e-07 | 38 |
endoderm of foregut | 5.96e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.76e-23 | 235 |
disease of cellular proliferation | 1.42e-22 | 239 |
cell type cancer | 3.35e-21 | 143 |
carcinoma | 1.33e-12 | 106 |
lung small cell carcinoma | 1.29e-08 | 4 |
organ system cancer | 1.45e-08 | 137 |
giant cell tumor | 1.24e-07 | 2 |
bone giant cell tumor | 1.24e-07 | 2 |
respiratory system cancer | 1.51e-07 | 16 |
germ cell and embryonal cancer | 3.84e-07 | 22 |
germ cell cancer | 3.84e-07 | 22 |