FFCP PHASE1:Hg19::chr10:89636696..89636699,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:89636696..89636699,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr10:89636696..89636699,+ | |description=CAGE_peak_at_chr10:89636696..89636699,+ | ||
|id=chr10:89636696..89636699,+ | |id=chr10:89636696..89636699,+ | ||
|ontology_enrichment_celltype=CL:0000037!4.95e-31!172;CL:0000566!4.95e-31!172;CL:0000738!1.84e-30!140;CL:0002032!4.19e-28!165;CL:0000837!4.19e-28!165;CL:0000988!1.00e-27!182;CL:0002087!1.00e-27!119;CL:0002031!1.85e-24!124;CL:0000542!3.59e-15!53;CL:0000051!3.59e-15!53;CL:0000838!5.29e-15!52;CL:0000763!2.02e-13!112;CL:0000049!2.02e-13!112;CL:0000766!8.71e-13!76;CL:0000860!1.67e-12!45;CL:0002009!1.96e-12!65;CL:0002194!8.84e-12!63;CL:0000576!8.84e-12!63;CL:0000040!8.84e-12!63;CL:0000559!8.84e-12!63;CL:0002057!1.14e-11!42;CL:0000945!1.08e-10!24;CL:0000826!1.08e-10!24;CL:0000557!1.31e-10!71;CL:0000839!9.41e-10!70;CL:0000236!1.94e-07!14 | |ontology_enrichment_celltype=CL:0000037!4.95e-31!172;CL:0000566!4.95e-31!172;CL:0000738!1.84e-30!140;CL:0002032!4.19e-28!165;CL:0000837!4.19e-28!165;CL:0000988!1.00e-27!182;CL:0002087!1.00e-27!119;CL:0002031!1.85e-24!124;CL:0000542!3.59e-15!53;CL:0000051!3.59e-15!53;CL:0000838!5.29e-15!52;CL:0000763!2.02e-13!112;CL:0000049!2.02e-13!112;CL:0000766!8.71e-13!76;CL:0000860!1.67e-12!45;CL:0002009!1.96e-12!65;CL:0002194!8.84e-12!63;CL:0000576!8.84e-12!63;CL:0000040!8.84e-12!63;CL:0000559!8.84e-12!63;CL:0002057!1.14e-11!42;CL:0000945!1.08e-10!24;CL:0000826!1.08e-10!24;CL:0000557!1.31e-10!71;CL:0000839!9.41e-10!70;CL:0000236!1.94e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.52e-11;24!CL:0002087;1.40e-09;104!CL:0000542;1.45e-09;53!CL:0000576;3.55e-09;48!CL:0000860;1.97e-08;33!CL:0002057;1.97e-08;33!CL:0000236;2.14e-07;13!CL:0000738;3.58e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.21e-33,168;CL:0000738,3.08e-32,136;CL:0000988,2.41e-30,177;CL:0002032,1.47e-29,161;CL:0000837,1.47e-29,161;CL:0002087,2.44e-29,115;CL:0002031,4.83e-26,120;CL:0000542,8.92e-17,53;CL:0000051,8.92e-17,53;CL:0000838,1.37e-16,52;CL:0000763,1.79e-13,108;CL:0000049,1.79e-13,108;CL:0000766,4.59e-13,72;CL:0000860,5.81e-13,42;CL:0002057,5.81e-13,42;CL:0002009,1.89e-12,61;CL:0002194,9.73e-12,59;CL:0000576,9.73e-12,59;CL:0000040,9.73e-12,59;CL:0000559,9.73e-12,59;CL:0000945,3.41e-11,24;CL:0000826,3.41e-11,24;CL:0000473,1.01e-10,48;CL:0000234,1.01e-10,48;CL:0000557,1.09e-10,67;CL:0000839,8.46e-10,66;CL:0000236,4.47e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000051;1.45e-09;53!CL:0002057;5.52e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.18e-16!102;UBERON:0003061!7.18e-16!102;UBERON:0002193!4.58e-14!112;UBERON:0002371!8.08e-09!80;UBERON:0000178!3.19e-08!15;UBERON:0000179!3.19e-08!15;UBERON:0000463!3.19e-08!15;UBERON:0001474!4.25e-08!86;UBERON:0007023!7.68e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.39e-09;15!UBERON:0000179;2.39e-09;15!UBERON:0000463;2.39e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.16e-16,98;UBERON:0003061,3.16e-16,98;UBERON:0002193,1.73e-14,108;UBERON:0000178,6.06e-09,15;UBERON:0000179,6.06e-09,15;UBERON:0000463,6.06e-09,15;UBERON:0002405,6.07e-09,93;UBERON:0002371,1.35e-08,76;UBERON:0001474,7.50e-08,82 | |||
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| ||
|short_description=p@chr10:89636696..89636699,+ | |short_description=p@chr10:89636696..89636699,+ | ||
}} | }} |
Latest revision as of 16:26, 23 July 2015
Short description: | p@chr10:89636696..89636699, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:89636696..89636699, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 9.21e-33 | 168 |
leukocyte | 3.08e-32 | 136 |
hematopoietic cell | 2.41e-30 | 177 |
hematopoietic oligopotent progenitor cell | 1.47e-29 | 161 |
hematopoietic multipotent progenitor cell | 1.47e-29 | 161 |
nongranular leukocyte | 2.44e-29 | 115 |
hematopoietic lineage restricted progenitor cell | 4.83e-26 | 120 |
lymphocyte | 8.92e-17 | 53 |
common lymphoid progenitor | 8.92e-17 | 53 |
lymphoid lineage restricted progenitor cell | 1.37e-16 | 52 |
myeloid cell | 1.79e-13 | 108 |
common myeloid progenitor | 1.79e-13 | 108 |
myeloid leukocyte | 4.59e-13 | 72 |
classical monocyte | 5.81e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.81e-13 | 42 |
macrophage dendritic cell progenitor | 1.89e-12 | 61 |
monopoietic cell | 9.73e-12 | 59 |
monocyte | 9.73e-12 | 59 |
monoblast | 9.73e-12 | 59 |
promonocyte | 9.73e-12 | 59 |
lymphocyte of B lineage | 3.41e-11 | 24 |
pro-B cell | 3.41e-11 | 24 |
defensive cell | 1.01e-10 | 48 |
phagocyte | 1.01e-10 | 48 |
granulocyte monocyte progenitor cell | 1.09e-10 | 67 |
myeloid lineage restricted progenitor cell | 8.46e-10 | 66 |
B cell | 4.47e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.16e-16 | 98 |
blood island | 3.16e-16 | 98 |
hemolymphoid system | 1.73e-14 | 108 |
blood | 6.06e-09 | 15 |
haemolymphatic fluid | 6.06e-09 | 15 |
organism substance | 6.06e-09 | 15 |
immune system | 6.07e-09 | 93 |
bone marrow | 1.35e-08 | 76 |
bone element | 7.50e-08 | 82 |