FFCP PHASE1:Hg19::chr11:103673881..103673894,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:103673881..103673894,- | |||
|coexpression_cluster_id=C3076 | |coexpression_cluster_id=C3076 | ||
|description=CAGE_peak_at_chr11:103673881..103673894,- | |description=CAGE_peak_at_chr11:103673881..103673894,- | ||
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|ontology_enrichment_celltype=CL:0002494!2.08e-15!16;CL:0000057!4.62e-15!75;CL:0000055!8.77e-13!180;CL:0002548!5.83e-12!6;CL:0000569!2.66e-11!4;CL:0000011!2.66e-11!4;CL:1000306!3.03e-11!4;CL:0002547!3.03e-11!4;CL:0002605!1.25e-09!3;CL:0002580!2.86e-09!3;CL:0000047!1.17e-08!8;CL:0002579!2.64e-08!3;CL:0000048!1.00e-07!430;CL:0002334!1.53e-07!12;CL:0000723!1.97e-07!436;CL:0000034!4.70e-07!444;CL:0002620!7.42e-07!23;CL:0002617!7.47e-07!2 | |ontology_enrichment_celltype=CL:0002494!2.08e-15!16;CL:0000057!4.62e-15!75;CL:0000055!8.77e-13!180;CL:0002548!5.83e-12!6;CL:0000569!2.66e-11!4;CL:0000011!2.66e-11!4;CL:1000306!3.03e-11!4;CL:0002547!3.03e-11!4;CL:0002605!1.25e-09!3;CL:0002580!2.86e-09!3;CL:0000047!1.17e-08!8;CL:0002579!2.64e-08!3;CL:0000048!1.00e-07!430;CL:0002334!1.53e-07!12;CL:0000723!1.97e-07!436;CL:0000034!4.70e-07!444;CL:0002620!7.42e-07!23;CL:0002617!7.47e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002605;3.03e-21;3!CL:0002548;2.12e-18;6!CL:0002494;1.17e-14;16!CL:0002617;1.51e-14;2!CL:0000047;1.73e-14;2!CL:0002319;2.02e-11;25!CL:0002580;2.90e-10;3!CL:0000128;2.09e-09;7!CL:0000126;2.09e-09;7!CL:0000127;2.09e-09;7!CL:0000511;6.40e-08;1!CL:0002625;6.40e-08;1!CL:0000216;6.40e-08;1!CL:0002591;6.40e-08;1!CL:0000569;1.64e-07;4 | |ontology_enrichment_celltype_v019=CL:0002605;3.03e-21;3!CL:0002548;2.12e-18;6!CL:0002494;1.17e-14;16!CL:0002617;1.51e-14;2!CL:0000047;1.73e-14;2!CL:0002319;2.02e-11;25!CL:0002580;2.90e-10;3!CL:0000128;2.09e-09;7!CL:0000126;2.09e-09;7!CL:0000127;2.09e-09;7!CL:0000511;6.40e-08;1!CL:0002625;6.40e-08;1!CL:0000216;6.40e-08;1!CL:0002591;6.40e-08;1!CL:0000569;1.64e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.57e-21,3;CL:0002548,1.24e-18,6;CL:0002494,7.18e-15,16;CL:0002617,1.57e-14,2;CL:0000047,1.56e-13,8;CL:0002319,1.96e-11,25;CL:0002580,2.91e-10,3;CL:0000128,1.95e-09,7;CL:0000126,1.95e-09,7;CL:0000127,1.95e-09,7;CL:0002453,1.95e-09,7;CL:0000511,3.83e-08,1;CL:0002625,3.83e-08,1;CL:0000216,3.83e-08,1;CL:0002591,8.12e-08,1;CL:0000569,1.26e-07,4;CL:0000011,1.26e-07,4;CL:0000133,1.63e-07,59;CL:0000136,3.55e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000011;1.64e-07;4 | |ontology_enrichment_development_v019=CL:0000011;1.64e-07;4 | ||
|ontology_enrichment_disease=DOID:17!6.99e-08!5;DOID:450!6.99e-08!5;DOID:66!6.99e-08!5;DOID:423!6.99e-08!5;DOID:0080000!6.99e-08!5;DOID:11722!6.99e-08!5 | |ontology_enrichment_disease=DOID:17!6.99e-08!5;DOID:450!6.99e-08!5;DOID:66!6.99e-08!5;DOID:423!6.99e-08!5;DOID:0080000!6.99e-08!5;DOID:11722!6.99e-08!5 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000948!6.44e-14!24;UBERON:0005498!6.44e-14!24;UBERON:0004140!6.44e-14!24;UBERON:0009881!6.44e-14!24;UBERON:0004141!6.44e-14!24;UBERON:0003084!6.44e-14!24;UBERON:0007005!6.44e-14!24;UBERON:0004139!6.44e-14!24;UBERON:0004291!6.44e-14!24;UBERON:0004872!1.51e-13!84;UBERON:0007100!4.78e-12!27;UBERON:0000415!3.03e-11!4;UBERON:0007240!3.03e-11!4;UBERON:0005742!3.03e-11!4;UBERON:0005734!3.03e-11!4;UBERON:0004664!3.03e-11!4;UBERON:0004663!3.03e-11!4;UBERON:0003688!7.46e-11!6;UBERON:0002358!7.46e-11!6;UBERON:0003684!7.46e-11!6;UBERON:0001178!7.46e-11!6;UBERON:0004535!1.07e-08!110;UBERON:0001009!2.63e-08!113;UBERON:0001637!6.68e-08!42;UBERON:0003509!6.68e-08!42;UBERON:0004572!6.68e-08!42;UBERON:0003914!1.00e-07!118;UBERON:0000947!4.92e-07!21;UBERON:0010191!4.92e-07!21;UBERON:0000310!5.56e-07!10 | |ontology_enrichment_uberon=UBERON:0000948!6.44e-14!24;UBERON:0005498!6.44e-14!24;UBERON:0004140!6.44e-14!24;UBERON:0009881!6.44e-14!24;UBERON:0004141!6.44e-14!24;UBERON:0003084!6.44e-14!24;UBERON:0007005!6.44e-14!24;UBERON:0004139!6.44e-14!24;UBERON:0004291!6.44e-14!24;UBERON:0004872!1.51e-13!84;UBERON:0007100!4.78e-12!27;UBERON:0000415!3.03e-11!4;UBERON:0007240!3.03e-11!4;UBERON:0005742!3.03e-11!4;UBERON:0005734!3.03e-11!4;UBERON:0004664!3.03e-11!4;UBERON:0004663!3.03e-11!4;UBERON:0003688!7.46e-11!6;UBERON:0002358!7.46e-11!6;UBERON:0003684!7.46e-11!6;UBERON:0001178!7.46e-11!6;UBERON:0004535!1.07e-08!110;UBERON:0001009!2.63e-08!113;UBERON:0001637!6.68e-08!42;UBERON:0003509!6.68e-08!42;UBERON:0004572!6.68e-08!42;UBERON:0003914!1.00e-07!118;UBERON:0000947!4.92e-07!21;UBERON:0010191!4.92e-07!21;UBERON:0000310!5.56e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;3.40e-11;10!UBERON:0000948;1.61e-10;22!UBERON:0001443;3.45e-10;11!UBERON:0007100;3.41e-09;25!UBERON:0001136;6.40e-08;1!UBERON:0001343;6.40e-08;1!UBERON:0004910;6.40e-08;1!UBERON:0004813;6.40e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0000310;3.40e-11;10!UBERON:0000948;1.61e-10;22!UBERON:0001443;3.45e-10;11!UBERON:0007100;3.41e-09;25!UBERON:0001136;6.40e-08;1!UBERON:0001343;6.40e-08;1!UBERON:0004910;6.40e-08;1!UBERON:0004813;6.40e-08;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,5.22e-13,24;UBERON:0005498,5.22e-13,24;UBERON:0004140,5.22e-13,24;UBERON:0009881,5.22e-13,24;UBERON:0004141,5.22e-13,24;UBERON:0003084,5.22e-13,24;UBERON:0007005,5.22e-13,24;UBERON:0004139,5.22e-13,24;UBERON:0004291,5.22e-13,24;UBERON:0007100,1.81e-11,27;UBERON:0000310,3.45e-11,10;UBERON:0004872,3.82e-11,83;UBERON:0001443,3.50e-10,11;UBERON:0001136,3.83e-08,1;UBERON:0001343,3.83e-08,1;UBERON:0004910,3.83e-08,1;UBERON:0005154,3.83e-08,1;UBERON:0005295,3.83e-08,1;UBERON:0004813,3.83e-08,1;UBERON:0005297,3.83e-08,1;UBERON:0005294,3.83e-08,1;UBERON:0010141,3.83e-08,1;UBERON:0005891,3.83e-08,1 | |||
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|short_description=p@chr11:103673881..103673894,- | |short_description=p@chr11:103673881..103673894,- | ||
}} | }} |
Latest revision as of 17:36, 23 July 2015
Short description: | p@chr11:103673881..103673894, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:103673881..103673894, - |
Coexpression cluster: | C3076_Astrocyte_Preadipocyte_mesenchymal_Fibroblast_Neural_Adipocyte_Neurons |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.57e-21 | 3 |
cardiac fibroblast | 1.24e-18 | 6 |
cardiocyte | 7.18e-15 | 16 |
adipocyte of breast | 1.57e-14 | 2 |
neuronal stem cell | 1.56e-13 | 8 |
neural cell | 1.96e-11 | 25 |
preadipocyte of the breast | 2.91e-10 | 3 |
oligodendrocyte | 1.95e-09 | 7 |
macroglial cell | 1.95e-09 | 7 |
astrocyte | 1.95e-09 | 7 |
oligodendrocyte precursor cell | 1.95e-09 | 7 |
androgen binding protein secreting cell | 3.83e-08 | 1 |
seminiferous tubule epithelial cell | 3.83e-08 | 1 |
Sertoli cell | 3.83e-08 | 1 |
smooth muscle cell of the pulmonary artery | 8.12e-08 | 1 |
cardiac mesenchymal cell | 1.26e-07 | 4 |
migratory trunk neural crest cell | 1.26e-07 | 4 |
neurectodermal cell | 1.63e-07 | 59 |
fat cell | 3.55e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
heart | 5.22e-13 | 24 |
primitive heart tube | 5.22e-13 | 24 |
primary heart field | 5.22e-13 | 24 |
anterior lateral plate mesoderm | 5.22e-13 | 24 |
heart tube | 5.22e-13 | 24 |
heart primordium | 5.22e-13 | 24 |
cardiac mesoderm | 5.22e-13 | 24 |
cardiogenic plate | 5.22e-13 | 24 |
heart rudiment | 5.22e-13 | 24 |
primary circulatory organ | 1.81e-11 | 27 |
breast | 3.45e-11 | 10 |
splanchnic layer of lateral plate mesoderm | 3.82e-11 | 83 |
chest | 3.50e-10 | 11 |
mesothelium | 3.83e-08 | 1 |
seminiferous tubule of testis | 3.83e-08 | 1 |
epithelium of male gonad | 3.83e-08 | 1 |
epithelial cord | 3.83e-08 | 1 |
sex cord | 3.83e-08 | 1 |
seminiferous tubule epithelium | 3.83e-08 | 1 |
testis sex cord | 3.83e-08 | 1 |
genital ridge | 3.83e-08 | 1 |
primitive sex cord of indifferent gonad | 3.83e-08 | 1 |
coelomic epithelium | 3.83e-08 | 1 |