FFCP PHASE1:Hg19::chr11:118753498..118753510,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:118753498..118753510,+ | |||
|description=CAGE_peak_at_chr11:118753498..118753510,+ | |||
|id=chr11:118753498..118753510,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.10e-47!42;CL:0000738!6.31e-45!140;CL:0000860!2.65e-43!45;CL:0000037!2.68e-43!172;CL:0000566!2.68e-43!172;CL:0000766!6.21e-41!76;CL:0000988!3.30e-40!182;CL:0002032!5.28e-40!165;CL:0000837!5.28e-40!165;CL:0000557!2.17e-38!71;CL:0000763!2.25e-38!112;CL:0000049!2.25e-38!112;CL:0002009!8.58e-37!65;CL:0002031!2.06e-36!124;CL:0002087!4.32e-34!119;CL:0000839!4.91e-34!70;CL:0002194!5.16e-33!63;CL:0000576!5.16e-33!63;CL:0000040!5.16e-33!63;CL:0000559!5.16e-33!63;CL:0000134!5.11e-14!358;CL:0002320!1.68e-13!365;CL:0000219!1.12e-11!390;CL:0000048!3.64e-10!430;CL:0000723!7.60e-10!436;CL:0000034!1.96e-09!444;CL:0000084!7.51e-08!25;CL:0000827!7.51e-08!25;CL:0001014!7.01e-07!2;CL:0001016!7.01e-07!2;CL:0000094!8.15e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.60e-23;8!CL:0000081;3.34e-17;11!CL:0000767;2.20e-16;3!CL:0000766;7.54e-12;69!CL:0000860;2.06e-11;33!CL:0002057;2.06e-11;33!CL:0000097;1.18e-10;5!CL:0000473;4.00e-09;39!CL:0000234;4.00e-09;39!CL:0000763;2.17e-08;100!CL:0000771;4.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.36e-25,108;CL:0000049,1.36e-25,108;CL:0000766,1.74e-25,72;CL:0000094,1.91e-23,8;CL:0002032,6.10e-19,161;CL:0000837,6.10e-19,161;CL:0000037,4.47e-18,168;CL:0000738,2.17e-17,136;CL:0000081,3.79e-17,11;CL:0000988,4.61e-17,177;CL:0000767,2.78e-16,3;CL:0000839,2.99e-13,66;CL:0000860,3.81e-13,42;CL:0002057,3.81e-13,42;CL:0000557,4.86e-13,67;CL:0000473,1.99e-11,48;CL:0000234,1.99e-11,48;CL:0000097,1.21e-10,5;CL:0002028,1.21e-10,5;CL:0002194,5.14e-09,59;CL:0000576,5.14e-09,59;CL:0000040,5.14e-09,59;CL:0000559,5.14e-09,59;CL:0002009,1.05e-08,61;CL:0002031,1.77e-08,120;CL:0000134,1.68e-07,354;CL:0002320,2.59e-07,361;CL:0000771,3.93e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;6.33e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;6.42e-13;1!DOID:0060061;6.42e-13;1!DOID:8691;6.42e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,7.68e-13,1;DOID:0060061,7.68e-13,1;DOID:8691,7.68e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.02e-37!102;UBERON:0003061!1.02e-37!102;UBERON:0002193!2.07e-35!112;UBERON:0002371!2.28e-35!80;UBERON:0001474!2.73e-32!86;UBERON:0002405!8.88e-27!115;UBERON:0004765!3.45e-26!101;UBERON:0001434!3.45e-26!101;UBERON:0002204!2.02e-13!167;UBERON:0003081!2.04e-13!216;UBERON:0002384!8.57e-13!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.17e-11,76;UBERON:0001474,1.73e-10,82;UBERON:0004765,1.81e-09,90;UBERON:0002405,3.94e-09,93;UBERON:0002390,1.30e-08,98;UBERON:0003061,1.30e-08,98;UBERON:0001434,2.02e-08,100;UBERON:0002193,1.02e-07,108;UBERON:0002384,4.69e-07,371 | |||
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| ||
|short_description=p@chr11:118753498..118753510,+ | |||
}} | }} |
Latest revision as of 18:52, 23 July 2015
Short description: | p@chr11:118753498..118753510, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:118753498..118753510, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.36e-25 | 108 |
common myeloid progenitor | 1.36e-25 | 108 |
myeloid leukocyte | 1.74e-25 | 72 |
granulocyte | 1.91e-23 | 8 |
hematopoietic oligopotent progenitor cell | 6.10e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.10e-19 | 161 |
hematopoietic stem cell | 4.47e-18 | 168 |
leukocyte | 2.17e-17 | 136 |
blood cell | 3.79e-17 | 11 |
hematopoietic cell | 4.61e-17 | 177 |
basophil | 2.78e-16 | 3 |
myeloid lineage restricted progenitor cell | 2.99e-13 | 66 |
classical monocyte | 3.81e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.81e-13 | 42 |
granulocyte monocyte progenitor cell | 4.86e-13 | 67 |
defensive cell | 1.99e-11 | 48 |
phagocyte | 1.99e-11 | 48 |
mast cell | 1.21e-10 | 5 |
basophil mast progenitor cell | 1.21e-10 | 5 |
monopoietic cell | 5.14e-09 | 59 |
monocyte | 5.14e-09 | 59 |
monoblast | 5.14e-09 | 59 |
promonocyte | 5.14e-09 | 59 |
macrophage dendritic cell progenitor | 1.05e-08 | 61 |
hematopoietic lineage restricted progenitor cell | 1.77e-08 | 120 |
mesenchymal cell | 1.68e-07 | 354 |
connective tissue cell | 2.59e-07 | 361 |
eosinophil | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.17e-11 | 76 |
bone element | 1.73e-10 | 82 |
skeletal element | 1.81e-09 | 90 |
immune system | 3.94e-09 | 93 |
hematopoietic system | 1.30e-08 | 98 |
blood island | 1.30e-08 | 98 |
skeletal system | 2.02e-08 | 100 |
hemolymphoid system | 1.02e-07 | 108 |
connective tissue | 4.69e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 7.68e-13 | 1 |
cutaneous T cell lymphoma | 7.68e-13 | 1 |
mycosis fungoides | 7.68e-13 | 1 |