FFCP PHASE1:Hg19::chr11:122945490..122945530,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:122945490..122945530,- | |||
|description=CAGE_peak_at_chr11:122945490..122945530,- | |||
|id=chr11:122945490..122945530,- | |||
|ontology_enrichment_celltype=CL:0000055!2.66e-30!180;CL:0000057!1.30e-18!75;CL:0000680!2.04e-12!57;CL:0000056!2.04e-12!57;CL:0000355!2.04e-12!57;CL:0000187!5.21e-11!54;CL:0000393!5.50e-11!60;CL:0000211!5.50e-11!60;CL:0002620!4.34e-10!23;CL:0000183!2.78e-09!59;CL:0000192!9.21e-08!42;CL:0000514!9.21e-08!42;CL:0002334!1.02e-07!12;CL:0000136!1.94e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.20e-14;23!CL:0000499;4.74e-09;28!CL:0002320;2.40e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.35e-19,76;CL:0002620,1.04e-13,23;CL:0000048,1.18e-13,427;CL:0000723,4.74e-13,433;CL:0000034,1.02e-12,441;CL:0000499,4.67e-09,28;CL:0002320,1.57e-08,361;CL:0000680,5.89e-08,58;CL:0000056,5.89e-08,58;CL:0000355,5.89e-08,58;CL:0000134,1.78e-07,354;CL:0000136,2.31e-07,15;CL:0000187,6.19e-07,55;CL:0002334,8.81e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;8.62e-07;5!DOID:450;8.62e-07;5!DOID:66;8.62e-07;5!DOID:423;8.62e-07;5!DOID:0080000;8.62e-07;5!DOID:11722;8.62e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.67e-07,5;DOID:450,6.67e-07,5;DOID:66,6.67e-07,5;DOID:423,6.67e-07,5;DOID:0080000,6.67e-07,5;DOID:11722,6.67e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.11e-14!83;UBERON:0002329!3.11e-14!83;UBERON:0003077!3.11e-14!83;UBERON:0003059!3.11e-14!83;UBERON:0007282!3.11e-14!83;UBERON:0009618!3.11e-14!83;UBERON:0007285!3.11e-14!83;UBERON:0003102!2.33e-13!95;UBERON:0004290!6.00e-11!70;UBERON:0002385!9.30e-11!63;UBERON:0001015!9.30e-11!63;UBERON:0000383!9.30e-11!63;UBERON:0001134!1.60e-10!61;UBERON:0002036!1.60e-10!61;UBERON:0003082!1.60e-10!61;UBERON:0000486!5.98e-09!82;UBERON:0002199!1.13e-08!45;UBERON:0002416!1.13e-08!45;UBERON:0005256!1.29e-08!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;6.26e-08;46!UBERON:0002416;6.26e-08;46!UBERON:0002204;1.74e-07;70!UBERON:0001434;3.23e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,4.57e-12,46;UBERON:0002416,4.57e-12,46;UBERON:0003102,7.54e-12,99;UBERON:0002097,3.35e-09,41;UBERON:0007524,4.48e-09,73;UBERON:0002329,9.15e-09,71;UBERON:0003059,9.15e-09,71;UBERON:0007282,9.15e-09,71;UBERON:0004290,9.15e-09,71;UBERON:0009618,9.15e-09,71;UBERON:0003077,1.56e-08,72;UBERON:0007285,1.56e-08,72;UBERON:0002384,4.23e-08,371;UBERON:0000486,5.52e-08,83;UBERON:0007503,2.74e-07,78;UBERON:0001134,4.98e-07,62;UBERON:0002036,4.98e-07,62;UBERON:0003082,4.98e-07,62 | |||
|phase1_expression=0.726713517082227,5.56661362116556,0.986680828671798,6.00439790118782,3.5756887554183,0,2.53299878168311,0.631719873426831,2.08948502559871,0,0.697801167972428,0,0,1.36142988256051,1.32558950291166,3.36162573225888,0.602694528023977,2.92124036154949,1.46379839637152,0,0.408001382488506,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,0.12786256184353,3.97583067623023,0.50133791063589,5.5041677205113,2.3858578411533,4.86634870302636,0.283604451492204,1.33037638477538,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,0,1.77282716330412,0.132409180813219,2.29469296599051,1.77334191099179,0,0,0.49333509683432,0,0.404132016209064,1.79808093424805,0.454072282934794,0,0.234321431833797,1.24864030732128,0,2.83952493048422,1.17434498643765,1.78060238804945,2.24721290723598,0.61246251376468,2.57952066354713,2.27316718586684,2.37600571456411,7.66527480763526,0,0,0.168336113954066,1.87677779807946,0.277064115484183,1.31693286264251,4.29082914118628,3.90618953157152,0.567160915800105,1.4351170855109,1.70845911054854,2.11931901159562,3.90118424909723,2.47326070172253,0.772921620136887,0.744467425326359,1.0126579934476,2.24105111870757,2.01947019395292,2.20919756741518,2.7479829659198,1.77504796258307,1.20902517873168,0.508681776931463,0,0,0,0.243947412259191,0.265059536642971,0.348581828608555,0.414644220061482,1.00928340350251,0,0,0,0,1.85747171212792,1.44375896333917,1.18306800039844,0.674338760312407,1.20505514941741,1.54411561825352,3.05031221729369,1.42362371466658,2.96628877952362,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0.219500570817251,0,0.502644862058154,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.671928512795438,0.283550194484773,0.985143749731331,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.95339771567235,1.03417372606222,0,0,0.797814349754612,0,1.02882949704857,1.41849132023278,0.532844358032199,0.857867961948885,0,0,0.325736184293735,0.710783897485092,0.791951872933429,1.80863626235752,0.871533458600294,1.69954085009497,0,0,0,0.718874566474748,0,1.42636905040718,2.17171960001369,4.52047909610843,0.895304816199478,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,1.8403723757871,2.50085260529839,0.813795071099207,0.831883446123229,7.49401752948079,1.57702415033935,1.40569697991256,0,0,0,1.99267679560631,0.368738337083406,2.17209036170207,0,0,0,0,0,0,0,0,0.744323423456331,0.61384789315225,3.92924132206303,1.53766979106841,1.53512174720011,0.64341568457443,1.48418066444991,6.16838775210622,2.66342587969691,0.9033987161519,8.30807086693794,7.78609535681727,0.241718899183244,0.802025881213139,0.552485933615378,2.41110341145674,3.82391452814106,3.2781103739856,0,0.15403067420883,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,1.09883357782012,0.165018999841176,0,1.30012049207304,1.6068392984416,0.580024309752732,1.84858340537573,2.45605879561807,0.551346289938122,0.966782203814463,2.61030049045611,0.852266274161009,0.623224249527161,0.330569830721956,0.192190067365106,0.127612712494584,0.4046311234222,3.253918845081,3.77774816196768,0,0.308033580176089,0.532306030317022,0.869932992075073,0.37064843820784,1.00187420719394,1.116475108079,0.632758849437452,0.762520775695299,0,1.71175595213568,0,1.56989728039846,0.899362287916574,2.19629623788844,1.06031162111118,0.606547444719948,0,0.421258456238981,0,8.52997213709495,0,0.818999468447914,7.07027159768564,2.26016233240486,1.65409603063837,6.6343897524122,0,0,2.62357900818653,0,0.30982349809975,0.563391205064483,0.143411352204052,0.589494246078727,0,1.06428319221179,10.5553817648832,10.8667314676768,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0.755798243562828,0,0,0.622079175323615,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0,0,0,0,0,0.769502585037971,0.227884111694002,0.46112780877612,0.718061155278177,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0,1.22206028986725,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,1.38674673013139,0,0,0.34823682632161,0.34945333648406,4.47163684426203,0.677294319023596,0,0.328461828212837,0.678923115418936,0,1.35588444468319,0.411125773940253,1.78843150532691,0,0,0.881747022766871,0.426905989478705,0,0.144090417154106,0,0,0.14405479798815,0,0.707082103850386,0.271808412147228,0.104602846312333,0.713987523454252,0.288950589901519,0,0,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0.429226048136571,0,0.134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| |||
|short_description=p@chr11:122945490..122945530,- | |||
}} |
Latest revision as of 19:23, 23 July 2015
Short description: | p@chr11:122945490..122945530, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:122945490..122945530, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.35e-19 | 76 |
skin fibroblast | 1.04e-13 | 23 |
multi fate stem cell | 1.18e-13 | 427 |
somatic stem cell | 4.74e-13 | 433 |
stem cell | 1.02e-12 | 441 |
stromal cell | 4.67e-09 | 28 |
connective tissue cell | 1.57e-08 | 361 |
muscle precursor cell | 5.89e-08 | 58 |
myoblast | 5.89e-08 | 58 |
multi-potent skeletal muscle stem cell | 5.89e-08 | 58 |
mesenchymal cell | 1.78e-07 | 354 |
fat cell | 2.31e-07 | 15 |
muscle cell | 6.19e-07 | 55 |
preadipocyte | 8.81e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
integument | 4.57e-12 | 46 |
integumental system | 4.57e-12 | 46 |
surface structure | 7.54e-12 | 99 |
skin of body | 3.35e-09 | 41 |
dense mesenchyme tissue | 4.48e-09 | 73 |
somite | 9.15e-09 | 71 |
presomitic mesoderm | 9.15e-09 | 71 |
presumptive segmental plate | 9.15e-09 | 71 |
dermomyotome | 9.15e-09 | 71 |
trunk paraxial mesoderm | 9.15e-09 | 71 |
paraxial mesoderm | 1.56e-08 | 72 |
presumptive paraxial mesoderm | 1.56e-08 | 72 |
connective tissue | 4.23e-08 | 371 |
multilaminar epithelium | 5.52e-08 | 83 |
epithelial vesicle | 2.74e-07 | 78 |
skeletal muscle tissue | 4.98e-07 | 62 |
striated muscle tissue | 4.98e-07 | 62 |
myotome | 4.98e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.67e-07 | 5 |
myotonic disease | 6.67e-07 | 5 |
muscle tissue disease | 6.67e-07 | 5 |
myopathy | 6.67e-07 | 5 |
muscular disease | 6.67e-07 | 5 |
myotonic dystrophy | 6.67e-07 | 5 |