FFCP PHASE1:Hg19::chr11:1263446..1263456,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:1263446..1263456,+ | |||
|coexpression_cluster_id=C251 | |coexpression_cluster_id=C251 | ||
|description=CAGE_peak_at_chr11:1263446..1263456,+ | |description=CAGE_peak_at_chr11:1263446..1263456,+ | ||
|id=chr11:1263446..1263456,+ | |id=chr11:1263446..1263456,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.45e-26;1!UBERON:0006595;1.17e-10;86!UBERON:0009497;1.17e-08;13!UBERON:0008947;2.54e-08;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!1.53e-20!2;UBERON:0002372!2.79e-11!1;UBERON:0001961!2.79e-11!1;UBERON:0001744!2.79e-11!1;UBERON:0001735!2.79e-11!1;UBERON:0002363!1.77e-10!1;UBERON:0007647!1.77e-10!1;UBERON:0010115!1.77e-10!1;UBERON:0007023!2.34e-08!115;UBERON:0000077!2.67e-07!130;UBERON:0001041!9.57e-07!98 | |ontology_enrichment_uberon=UBERON:0003127!1.53e-20!2;UBERON:0002372!2.79e-11!1;UBERON:0001961!2.79e-11!1;UBERON:0001744!2.79e-11!1;UBERON:0001735!2.79e-11!1;UBERON:0002363!1.77e-10!1;UBERON:0007647!1.77e-10!1;UBERON:0010115!1.77e-10!1;UBERON:0007023!2.34e-08!115;UBERON:0000077!2.67e-07!130;UBERON:0001041!9.57e-07!98 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;7.50e-50;2!UBERON:0002372;2.45e-26;1!UBERON:0001961;2.45e-26;1!UBERON:0001744;2.45e-26;1!UBERON:0001042;2.45e-26;1!UBERON:0001735;2.45e-26;1!UBERON:0002294;3.06e-15;7!UBERON:0001173;3.06e-15;7!UBERON:0003126;4.53e-15;7!UBERON:0001005;4.53e-15;7!UBERON:0006562;6.85e-14;2!UBERON:0002110;1.05e-09;3!UBERON:0002423;1.28e-09;25!UBERON:0007196;1.52e-07;15!UBERON:0001558;1.52e-07;15!UBERON:0002394;1.64e-07;4!UBERON:0003928;1.64e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,5.15e-50,2;UBERON:0002372,2.78e-26,1;UBERON:0001961,2.78e-26,1;UBERON:0001744,2.78e-26,1;UBERON:0001735,2.78e-26,1;UBERON:0003126,4.07e-15,7;UBERON:0001005,4.07e-15,7;UBERON:0001041,6.03e-14,87;UBERON:0002294,4.42e-12,9;UBERON:0001173,4.42e-12,9;UBERON:0004912,4.42e-12,9;UBERON:0001007,7.53e-11,145;UBERON:0001555,7.53e-11,145;UBERON:0007026,7.53e-11,145;UBERON:0004921,3.38e-10,118;UBERON:0004119,7.84e-10,160;UBERON:0000925,7.84e-10,160;UBERON:0006595,7.84e-10,160;UBERON:0002110,1.01e-09,3;UBERON:0006242,1.01e-09,3;UBERON:0009497,1.28e-09,25;UBERON:0000015,1.28e-09,25;UBERON:0002423,1.28e-09,25;UBERON:0006235,1.28e-09,25;UBERON:0004161,1.28e-09,25;UBERON:0000072,7.35e-09,47;UBERON:0001004,1.30e-08,74;UBERON:0000065,9.26e-08,54;UBERON:0007196,1.44e-07,15;UBERON:0001558,1.44e-07,15;UBERON:0005178,3.43e-07,34;UBERON:0002224,3.43e-07,34;UBERON:0005181,5.30e-07,35 | |||
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|short_description=p@chr11:1263446..1263456,+ | |short_description=p@chr11:1263446..1263456,+ | ||
}} | }} |
Latest revision as of 19:45, 23 July 2015
Short description: | p@chr11:1263446..1263456, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1263446..1263456, + |
Coexpression cluster: | C251_gall_tonsil_trachea_CD14_salivary_throat_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 5.15e-50 | 2 |
tonsil | 2.78e-26 | 1 |
mucosa-associated lymphoid tissue | 2.78e-26 | 1 |
lymphoid tissue | 2.78e-26 | 1 |
tonsillar ring | 2.78e-26 | 1 |
trachea | 4.07e-15 | 7 |
respiratory airway | 4.07e-15 | 7 |
foregut | 6.03e-14 | 87 |
biliary system | 4.42e-12 | 9 |
biliary tree | 4.42e-12 | 9 |
biliary bud | 4.42e-12 | 9 |
digestive system | 7.53e-11 | 145 |
digestive tract | 7.53e-11 | 145 |
primitive gut | 7.53e-11 | 145 |
subdivision of digestive tract | 3.38e-10 | 118 |
endoderm-derived structure | 7.84e-10 | 160 |
endoderm | 7.84e-10 | 160 |
presumptive endoderm | 7.84e-10 | 160 |
gallbladder | 1.01e-09 | 3 |
gall bladder primordium | 1.01e-09 | 3 |
epithelium of foregut-midgut junction | 1.28e-09 | 25 |
anatomical boundary | 1.28e-09 | 25 |
hepatobiliary system | 1.28e-09 | 25 |
foregut-midgut junction | 1.28e-09 | 25 |
septum transversum | 1.28e-09 | 25 |
segment of respiratory tract | 7.35e-09 | 47 |
respiratory system | 1.30e-08 | 74 |
respiratory tract | 9.26e-08 | 54 |
tracheobronchial tree | 1.44e-07 | 15 |
lower respiratory tract | 1.44e-07 | 15 |
thoracic cavity element | 3.43e-07 | 34 |
thoracic cavity | 3.43e-07 | 34 |
thoracic segment organ | 5.30e-07 | 35 |