FFCP PHASE1:Hg19::chr11:128211301..128211311,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:128211301..128211311,- | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_at_chr11:128211301..128211311,- | |description=CAGE_peak_at_chr11:128211301..128211311,- | ||
|id=chr11:128211301..128211311,- | |id=chr11:128211301..128211311,- | ||
|ontology_enrichment_celltype=CL:0000791!6.56e-24!18;CL:0000789!6.56e-24!18;CL:0002420!6.56e-24!18;CL:0002419!6.56e-24!18;CL:0000790!6.56e-24!18;CL:0000624!1.00e-23!6;CL:0000084!1.61e-16!25;CL:0000827!1.61e-16!25;CL:0000898!9.52e-13!3;CL:0000623!6.50e-12!3;CL:0000825!6.50e-12!3;CL:0000767!9.40e-12!3;CL:0000842!2.69e-11!3;CL:0000838!3.14e-11!52;CL:0000542!5.90e-11!53;CL:0000051!5.90e-11!53;CL:0000738!3.33e-10!140;CL:0000815!5.58e-09!2;CL:0000792!5.58e-09!2;CL:0002677!5.58e-09!2;CL:0000224!1.39e-08!4;CL:0000625!2.51e-08!11;CL:0002087!1.34e-07!119;CL:0000037!2.94e-07!172;CL:0000566!2.94e-07!172 | |ontology_enrichment_celltype=CL:0000791!6.56e-24!18;CL:0000789!6.56e-24!18;CL:0002420!6.56e-24!18;CL:0002419!6.56e-24!18;CL:0000790!6.56e-24!18;CL:0000624!1.00e-23!6;CL:0000084!1.61e-16!25;CL:0000827!1.61e-16!25;CL:0000898!9.52e-13!3;CL:0000623!6.50e-12!3;CL:0000825!6.50e-12!3;CL:0000767!9.40e-12!3;CL:0000842!2.69e-11!3;CL:0000838!3.14e-11!52;CL:0000542!5.90e-11!53;CL:0000051!5.90e-11!53;CL:0000738!3.33e-10!140;CL:0000815!5.58e-09!2;CL:0000792!5.58e-09!2;CL:0002677!5.58e-09!2;CL:0000224!1.39e-08!4;CL:0000625!2.51e-08!11;CL:0002087!1.34e-07!119;CL:0000037!2.94e-07!172;CL:0000566!2.94e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000624;2.58e-60;6!CL:0000791;1.10e-34;18!CL:0000789;1.10e-34;18!CL:0002419;1.10e-34;18!CL:0000898;3.26e-31;3!CL:0000084;9.69e-25;25!CL:0000815;3.13e-21;2!CL:0000792;3.13e-21;2!CL:0002677;3.13e-21;2!CL:0000895;8.62e-12;1!CL:0000542;1.42e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.22e-60,6;CL:0000791,8.66e-35,18;CL:0000789,8.66e-35,18;CL:0002420,8.66e-35,18;CL:0002419,8.66e-35,18;CL:0000790,8.66e-35,18;CL:0000898,4.01e-31,3;CL:0000084,8.14e-25,25;CL:0000827,8.14e-25,25;CL:0000815,3.84e-21,2;CL:0000792,3.84e-21,2;CL:0002677,3.84e-21,2;CL:0000838,2.04e-14,52;CL:0000542,4.01e-14,53;CL:0000051,4.01e-14,53;CL:0000810,8.62e-12,1;CL:0000895,8.62e-12,1;CL:0002436,8.62e-12,1;CL:0002427,8.62e-12,1;CL:0002428,8.62e-12,1;CL:0002429,8.62e-12,1;CL:0002433,8.62e-12,1;CL:0002431,8.62e-12,1;CL:0002432,8.62e-12,1 | |||
|ontology_enrichment_development_v019=CL:0000790;1.10e-34;18!CL:0002427;8.62e-12;1!CL:0000051;1.42e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr11:128211301..128211311,- | |short_description=p@chr11:128211301..128211311,- | ||
}} | }} |
Latest revision as of 19:51, 23 July 2015
Short description: | p@chr11:128211301..128211311, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:128211301..128211311, - |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.22e-60 | 6 |
mature alpha-beta T cell | 8.66e-35 | 18 |
alpha-beta T cell | 8.66e-35 | 18 |
immature T cell | 8.66e-35 | 18 |
mature T cell | 8.66e-35 | 18 |
immature alpha-beta T cell | 8.66e-35 | 18 |
naive T cell | 4.01e-31 | 3 |
T cell | 8.14e-25 | 25 |
pro-T cell | 8.14e-25 | 25 |
regulatory T cell | 3.84e-21 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.84e-21 | 2 |
naive regulatory T cell | 3.84e-21 | 2 |
lymphoid lineage restricted progenitor cell | 2.04e-14 | 52 |
lymphocyte | 4.01e-14 | 53 |
common lymphoid progenitor | 4.01e-14 | 53 |
CD4-positive, alpha-beta thymocyte | 8.62e-12 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 8.62e-12 | 1 |
mature CD4 single-positive thymocyte | 8.62e-12 | 1 |
resting double-positive thymocyte | 8.62e-12 | 1 |
double-positive blast | 8.62e-12 | 1 |
CD69-positive double-positive thymocyte | 8.62e-12 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 8.62e-12 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 8.62e-12 | 1 |
CD24-positive, CD4 single-positive thymocyte | 8.62e-12 | 1 |