FFCP PHASE1:Hg19::chr11:1780775..1780793,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:1780775..1780793,- to FFCP PHASE1:Hg19::chr11:1780775..1780793,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-494bp_to_ENST00000427721_5end | |||
|cluster_id=chr11:1780775..1780793,- | |||
|coexpression_cluster_id=C587 | |||
|description=CAGE_peak_2_at_ENST00000427721_5end | |||
|id=chr11:1780775..1780793,- | |||
|ontology_enrichment_celltype=CL:0000839!6.36e-09!70;CL:0002194!3.34e-08!63;CL:0000576!3.34e-08!63;CL:0000040!3.34e-08!63;CL:0000559!3.34e-08!63;CL:0000557!4.03e-08!71;CL:0002009!2.45e-07!65;CL:0000766!5.18e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.20e-14;39!CL:0000234;6.20e-14;39!CL:0000235;5.62e-11;6!CL:0000860;4.74e-10;33!CL:0002057;4.74e-10;33!CL:0000766;3.94e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,6.84e-20,66;CL:0000557,2.01e-19,67;CL:0002194,2.55e-17,59;CL:0000576,2.55e-17,59;CL:0000040,2.55e-17,59;CL:0000559,2.55e-17,59;CL:0000766,2.71e-17,72;CL:0002009,1.98e-16,61;CL:0000473,7.82e-13,48;CL:0000234,7.82e-13,48;CL:0000235,5.90e-11,6;CL:0000763,8.62e-09,108;CL:0000049,8.62e-09,108;CL:0000860,2.28e-07,42;CL:0002057,2.28e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.52e-07!115;UBERON:0002204!4.54e-07!167;UBERON:0000468!5.55e-07!659;UBERON:0002371!6.37e-07!80;UBERON:0001474!7.22e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.60e-17,76;UBERON:0001474,9.64e-15,82;UBERON:0001434,2.40e-14,100;UBERON:0004765,2.98e-14,90;UBERON:0002405,1.49e-12,93;UBERON:0002390,1.37e-10,98;UBERON:0003061,1.37e-10,98;UBERON:0002204,1.45e-10,167;UBERON:0002193,2.41e-09,108;UBERON:0000926,3.18e-08,315;UBERON:0004120,3.18e-08,315;UBERON:0006603,3.18e-08,315;UBERON:0003081,8.16e-07,203 | |||
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| ||
|short_description=p2@ENST00000427721 | |||
}} | }} |
Latest revision as of 20:33, 23 July 2015
Short description: | p2@ENST00000427721 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000427721_5end |
Coexpression cluster: | C587_Osteoblast_Monocytederived_CD14_Macrophage_leiomyoma_Adipocyte_Dendritic |
Association with transcript: | -494bp_to_ENST00000427721_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 6.84e-20 | 66 |
granulocyte monocyte progenitor cell | 2.01e-19 | 67 |
monopoietic cell | 2.55e-17 | 59 |
monocyte | 2.55e-17 | 59 |
monoblast | 2.55e-17 | 59 |
promonocyte | 2.55e-17 | 59 |
myeloid leukocyte | 2.71e-17 | 72 |
macrophage dendritic cell progenitor | 1.98e-16 | 61 |
defensive cell | 7.82e-13 | 48 |
phagocyte | 7.82e-13 | 48 |
macrophage | 5.90e-11 | 6 |
myeloid cell | 8.62e-09 | 108 |
common myeloid progenitor | 8.62e-09 | 108 |
classical monocyte | 2.28e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.28e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.60e-17 | 76 |
bone element | 9.64e-15 | 82 |
skeletal system | 2.40e-14 | 100 |
skeletal element | 2.98e-14 | 90 |
immune system | 1.49e-12 | 93 |
hematopoietic system | 1.37e-10 | 98 |
blood island | 1.37e-10 | 98 |
musculoskeletal system | 1.45e-10 | 167 |
hemolymphoid system | 2.41e-09 | 108 |
mesoderm | 3.18e-08 | 315 |
mesoderm-derived structure | 3.18e-08 | 315 |
presumptive mesoderm | 3.18e-08 | 315 |
lateral plate mesoderm | 8.16e-07 | 203 |