FFCP PHASE1:Hg19::chr11:2291230..2291344,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=221bp_to_AB590776_5end | |||
|cluster_id=chr11:2291230..2291344,- | |||
|description=CAGE_peak_1_at_AB590776_5end | |||
|id=chr11:2291230..2291344,- | |||
|ontology_enrichment_celltype=CL:0000766!6.85e-30!76;CL:0000738!3.90e-26!140;CL:0002194!5.59e-25!63;CL:0000576!5.59e-25!63;CL:0000040!5.59e-25!63;CL:0000559!5.59e-25!63;CL:0000839!7.59e-25!70;CL:0000037!1.88e-24!172;CL:0000566!1.88e-24!172;CL:0002087!7.15e-24!119;CL:0002057!1.52e-23!42;CL:0002009!2.21e-23!65;CL:0002032!1.46e-22!165;CL:0000837!1.46e-22!165;CL:0000557!1.66e-22!71;CL:0002031!2.44e-22!124;CL:0000763!8.89e-22!112;CL:0000049!8.89e-22!112;CL:0000988!1.45e-20!182;CL:0000860!1.45e-20!45;CL:0002393!8.05e-08!9;CL:0002397!8.05e-08!9;CL:0000625!1.02e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000576;7.10e-22;48!CL:0000860;3.07e-20;33!CL:0002057;3.07e-20;33!CL:0000473;1.07e-18;39!CL:0000234;1.07e-18;39!CL:0000766;1.36e-17;69!CL:0000763;2.23e-10;100!CL:0000625;9.81e-10;11!CL:0002087;1.17e-09;104!CL:0000094;2.63e-08;8!CL:0000738;2.79e-08;136!CL:0002393;6.38e-07;6!CL:0002397;6.38e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.20e-41,72;CL:0000738,3.15e-37,136;CL:0002194,1.40e-35,59;CL:0000576,1.40e-35,59;CL:0000040,1.40e-35,59;CL:0000559,1.40e-35,59;CL:0002009,1.01e-33,61;CL:0002087,1.62e-33,115;CL:0000839,6.14e-33,66;CL:0000473,1.09e-32,48;CL:0000234,1.09e-32,48;CL:0000557,4.02e-32,67;CL:0000037,1.14e-31,168;CL:0000860,1.46e-30,42;CL:0002057,1.46e-30,42;CL:0002031,6.72e-30,120;CL:0002032,5.13e-29,161;CL:0000837,5.13e-29,161;CL:0000988,2.92e-28,177;CL:0000763,2.00e-27,108;CL:0000049,2.00e-27,108;CL:0002393,8.17e-10,9;CL:0002397,8.17e-10,9;CL:0000625,1.11e-09,11;CL:0000094,2.34e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;7.19e-22;42!CL:0000049;1.33e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.24e-23!102;UBERON:0003061!4.24e-23!102;UBERON:0002193!3.01e-20!112;UBERON:0002371!7.22e-18!80;UBERON:0001474!9.06e-16!86;UBERON:0004765!1.26e-12!101;UBERON:0001434!1.26e-12!101;UBERON:0002405!3.94e-11!115;UBERON:0007023!6.32e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.00e-08;15!UBERON:0000179;3.00e-08;15!UBERON:0000463;3.00e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.58e-34,98;UBERON:0003061,5.58e-34,98;UBERON:0002193,3.05e-30,108;UBERON:0002371,7.14e-27,76;UBERON:0001474,2.29e-23,82;UBERON:0002405,3.10e-23,93;UBERON:0004765,1.76e-19,90;UBERON:0001434,2.17e-16,100;UBERON:0003081,1.08e-10,203;UBERON:0000178,3.24e-08,15;UBERON:0000179,3.24e-08,15;UBERON:0000463,3.24e-08,15 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0.436882744260345,0.263766978228454,0.123766352960047,0,0,0,0.730310090387373,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,11.8009283054671,8.82807615623589,11.4563931253896,0,1.8072355126695,5.17655614233503,0,0,2.93600439334847,9.97191735357379,8.42286679374595,10.8505435357926,5.37397138175818,4.85840499028469,5.40908692031792,13.0858414901608,4.1566353805769,14.7976277324568,3.95129362739664,2.46700732813095,2.16794459626573,7.48000220037591,6.14785695669842,10.4052181150977,3.10271112662957,1.93645405075148,2.70852973188684,5.64727018627814,3.0019676506363,6.06753408001728,4.89734227793444,2.24650318953266,4.47535988059329,26.3881040149373,11.9678194572979,23.8685860298309,5.80418477257168,3.40431134814684,3.73693349397345,6.02996796616184,4.69334626578181,6.73285418585862,10.2917915447673,3.68277635987565,7.27863491114034,23.0268262080017,18.4965740969588,24.1107442334632,21.6794258112736,16.3692813197242,19.6085215770438,20.8059302931111,13.5263340495381,23.7463399894024,1.75996244461323,3.82297027883492,2.66852776159066,2.56038133539904,2.40237592221607,0.574752439954483,3.30522436392431,1.90810750907073,1.70763890732835,2.34894875748376,0.764546456250458,0,0.560508562981536,1.84368859342554,0.196709770113833,1.17903228824749,0.616804496998528,0.167186495390678,0,0,0,0.779873198196215,0.589211814949674,0,1.62482318259009,0.128091319725675,0.780356085359269,0.164437904603676,0,0,0,0,0,0.113309342697566,3.83220493601921,0.34362744548263,1.26509846009751,3.18565414324097,6.51083453856419,6.65316431113862,11.5942841689885,12.2867146708242,21.2382235138988,7.10331756132051,11.4957919568947,8.0642697289893,13.6394499849589,4.19990771260117,0,0,0.255725123687061,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0,0.175669571386252,2.48860243445654,6.9216104775583,8.89882662682631,7.7891374477124,8.00996791576629,5.45127638127347,0.953962497221368,2.28797964312051,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7670626154095,15.511210565933,6.10531672999548,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0.211931901159562,0,0.206105058476878,0,0,0,0,0,0,0,0,0,0,1.73934767846967,0.272746120590835,1.14721838155602,0.243947412259191,0.530119073285941,1.85910308591229,0.725627385107593,0.252320850875628,0.72995471815166,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,6.49868897349544,0,19.0632079741826,0,0.439001141634502,6.74410519545717,0.804231779293047,2.22212268380471,0,0,0,0.34779121492523,0,0,0,0.570762456703795,30.0277671224525,36.0564188079846,5.41677413392274,0.468008530278475,2.22946743433092,0.93733833986777,0,0.141775097242386,0.0895585227028483,0,1.15014803749563,0,0.088048434013226,1.4512968087854,2.45003920808834,1.38866676769018,0.063497894292169,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,2.17048642156577,0,0,0,0,0,0,0,9.72990245129524,5.02257091432126,10.5416969741516,0,0,0,0,0,0,0,16.9446453773657,22.4252677853898,20.7915718773192,0,0,0,0.167516265334349,0,9.73709131131337,11.966458368161,8.70272578215674,0.24538298343828,0,0,0,0,0,0,0.601892199455438,0,1.03473071292505,0,0.184369168541703,0,0,0,6.82334486205528,9.27571063520052,9.71220776011343,3.94065842880137,4.99306318531491,2.72151263996712,0,0,0,0,0.511707249066704,0.160853921143607,0,0,0,0,0,0,21.6338414769004,0.802025881213139,4.05156351317944,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,1.64865618636356,0,0.082509499920588,0.574265537996172,1.30012049207304,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.178064071293475,5.12383237619032,3.2672311452068,0.382838137483752,8.59841137272174,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,1.21856744815642,0,0,0.141405431953713,0,0,0,0,0,0,0,0.6196469961995,0,0,0.196498082026242,0,0,0.211107635297664,0,0,0,3.46399605811843,3.35151137767894,2.17781969722645,2.07116361708914,1.29151611801369,0,2.21715076768338,0,13.1936378400364,12.9988325214204,11.3929437434833,8.81457569193819,11.1067813733272,8.43015304550532,11.3406601820004,10.3106272918255,0,0,0.490080431962063,0,0,0,0,3.5924286857907,2.10655907145603,0,0,3.93116049358842,0,0,2.50634477090067,0,0,4.237793851012,9.7944634668775,0,4.30137070031841,4.2498460499559,6.84081481018825,7.62013572067957,0,0,0,0,0,0,0.146508179271894,0,0,0,6.20735660317994,5.04839957415486,5.83605333988541,0,0.422008249231538,0,0,0,2.19172787076177,0.552567831062295,20.4065525761964,0,0,0.311039587661807,0,0.716084698702437,11.2545921449912,1.38100767891707,14.3689855408164,0,0,0,0,33.8556089410803,0,0,20.9379944845319,0,5.90969204419841,0,0,0,0,0.120596438625408,0,0,0,0,0,18.1250867562184,2.23155749661011,0,17.9839845422687,15.6178301273004,3.58536327342627,5.42301971544263,3.389110955868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| |||
|short_description=p1@AB590776 | |||
}} |
Latest revision as of 21:08, 23 July 2015
Short description: | p1@AB590776 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB590776_5end |
Coexpression cluster: | NA |
Association with transcript: | 221bp_to_AB590776_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.20e-41 | 72 |
leukocyte | 3.15e-37 | 136 |
monopoietic cell | 1.40e-35 | 59 |
monocyte | 1.40e-35 | 59 |
monoblast | 1.40e-35 | 59 |
promonocyte | 1.40e-35 | 59 |
macrophage dendritic cell progenitor | 1.01e-33 | 61 |
nongranular leukocyte | 1.62e-33 | 115 |
myeloid lineage restricted progenitor cell | 6.14e-33 | 66 |
defensive cell | 1.09e-32 | 48 |
phagocyte | 1.09e-32 | 48 |
granulocyte monocyte progenitor cell | 4.02e-32 | 67 |
hematopoietic stem cell | 1.14e-31 | 168 |
classical monocyte | 1.46e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.46e-30 | 42 |
hematopoietic lineage restricted progenitor cell | 6.72e-30 | 120 |
hematopoietic oligopotent progenitor cell | 5.13e-29 | 161 |
hematopoietic multipotent progenitor cell | 5.13e-29 | 161 |
hematopoietic cell | 2.92e-28 | 177 |
myeloid cell | 2.00e-27 | 108 |
common myeloid progenitor | 2.00e-27 | 108 |
intermediate monocyte | 8.17e-10 | 9 |
CD14-positive, CD16-positive monocyte | 8.17e-10 | 9 |
CD8-positive, alpha-beta T cell | 1.11e-09 | 11 |
granulocyte | 2.34e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.58e-34 | 98 |
blood island | 5.58e-34 | 98 |
hemolymphoid system | 3.05e-30 | 108 |
bone marrow | 7.14e-27 | 76 |
bone element | 2.29e-23 | 82 |
immune system | 3.10e-23 | 93 |
skeletal element | 1.76e-19 | 90 |
skeletal system | 2.17e-16 | 100 |
lateral plate mesoderm | 1.08e-10 | 203 |
blood | 3.24e-08 | 15 |
haemolymphatic fluid | 3.24e-08 | 15 |
organism substance | 3.24e-08 | 15 |