FFCP PHASE1:Hg19::chr11:2465735..2465749,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:2465735..2465749,- | |||
|coexpression_cluster_id=C43 | |coexpression_cluster_id=C43 | ||
|description=CAGE_peak_at_chr11:2465735..2465749,- | |description=CAGE_peak_at_chr11:2465735..2465749,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.99e-41;2!UBERON:0005754;1.88e-21;1!UBERON:0003918;6.28e-09;10!UBERON:0007687;6.28e-09;10 | |ontology_enrichment_development_v019=UBERON:0007297;5.99e-41;2!UBERON:0005754;1.88e-21;1!UBERON:0003918;6.28e-09;10!UBERON:0007687;6.28e-09;10 | ||
|ontology_enrichment_disease=DOID:3493!2.59e-11!2 | |ontology_enrichment_disease=DOID:3493!2.59e-11!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;2.60e-11;2 | |ontology_enrichment_disease_v019=DOID:3493;2.60e-11;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,2.73e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0006947!9.11e-17!3;UBERON:0004054!9.11e-17!3;UBERON:0005904!1.08e-12!4;UBERON:0003135!1.31e-11!11;UBERON:0007023!1.06e-08!115;UBERON:0003101!7.68e-08!22;UBERON:0000079!7.68e-08!22;UBERON:0000059!1.26e-07!11;UBERON:0002110!2.42e-07!3;UBERON:0006242!2.42e-07!3;UBERON:0001000!9.91e-07!1;UBERON:0005352!9.91e-07!1 | |ontology_enrichment_uberon=UBERON:0006947!9.11e-17!3;UBERON:0004054!9.11e-17!3;UBERON:0005904!1.08e-12!4;UBERON:0003135!1.31e-11!11;UBERON:0007023!1.06e-08!115;UBERON:0003101!7.68e-08!22;UBERON:0000079!7.68e-08!22;UBERON:0000059!1.26e-07!11;UBERON:0002110!2.42e-07!3;UBERON:0006242!2.42e-07!3;UBERON:0001000!9.91e-07!1;UBERON:0005352!9.91e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.33e-60;3!UBERON:0004054;1.33e-60;3!UBERON:0005904;1.07e-45;4!UBERON:0001000;1.53e-21;1!UBERON:0005352;1.53e-21;1!UBERON:0000998;1.88e-21;1!UBERON:0006868;1.88e-21;1!UBERON:0001301;2.30e-21;1!UBERON:0000058;8.92e-19;10!UBERON:0003135;3.89e-17;11!UBERON:0000160;1.59e-10;17!UBERON:0004175;2.75e-09;21!UBERON:0003101;6.84e-09;22!UBERON:0000079;6.84e-09;22!UBERON:0005409;2.28e-08;22!UBERON:0000059;4.18e-08;11 | |ontology_enrichment_uberon_v019=UBERON:0006947;1.33e-60;3!UBERON:0004054;1.33e-60;3!UBERON:0005904;1.07e-45;4!UBERON:0001000;1.53e-21;1!UBERON:0005352;1.53e-21;1!UBERON:0000998;1.88e-21;1!UBERON:0006868;1.88e-21;1!UBERON:0001301;2.30e-21;1!UBERON:0000058;8.92e-19;10!UBERON:0003135;3.89e-17;11!UBERON:0000160;1.59e-10;17!UBERON:0004175;2.75e-09;21!UBERON:0003101;6.84e-09;22!UBERON:0000079;6.84e-09;22!UBERON:0005409;2.28e-08;22!UBERON:0000059;4.18e-08;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.33e-60,3;UBERON:0004054,1.33e-60,3;UBERON:0005904,1.07e-45,4;UBERON:0001000,1.53e-21,1;UBERON:0005352,1.53e-21,1;UBERON:0000998,1.88e-21,1;UBERON:0006868,1.88e-21,1;UBERON:0001301,2.30e-21,1;UBERON:0003135,3.90e-17,11;UBERON:0000160,1.51e-10,17;UBERON:0000058,3.35e-10,19;UBERON:0000080,6.48e-10,9;UBERON:0002120,6.48e-10,9;UBERON:0004875,6.48e-10,9;UBERON:0005721,6.48e-10,9;UBERON:0005754,6.48e-10,9;UBERON:0007297,6.48e-10,9;UBERON:0003101,6.84e-09,22;UBERON:0000079,6.84e-09,22;UBERON:0004876,2.82e-08,11;UBERON:0000059,4.04e-08,11;UBERON:0004175,6.81e-08,25;UBERON:0003887,1.16e-07,12;UBERON:0002113,1.49e-07,26;UBERON:0003918,1.49e-07,26;UBERON:0011143,1.49e-07,26;UBERON:0005095,1.49e-07,26;UBERON:0007687,1.49e-07,26;UBERON:0005409,1.75e-07,25 | |||
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|short_description=p@chr11:2465735..2465749,- | |short_description=p@chr11:2465735..2465749,- | ||
}} | }} |
Latest revision as of 21:13, 23 July 2015
Short description: | p@chr11:2465735..2465749, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:2465735..2465749, - |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.33e-60 | 3 |
internal male genitalia | 1.33e-60 | 3 |
duct of male reproductive system | 1.07e-45 | 4 |
vas deferens | 1.53e-21 | 1 |
spermatic cord | 1.53e-21 | 1 |
seminal vesicle | 1.88e-21 | 1 |
seminal fluid secreting gland | 1.88e-21 | 1 |
epididymis | 2.30e-21 | 1 |
male reproductive organ | 3.90e-17 | 11 |
intestine | 1.51e-10 | 17 |
duct | 3.35e-10 | 19 |
mesonephros | 6.48e-10 | 9 |
pronephros | 6.48e-10 | 9 |
nephrogenic cord | 6.48e-10 | 9 |
pronephric mesoderm | 6.48e-10 | 9 |
rostral part of nephrogenic cord | 6.48e-10 | 9 |
presumptive pronephric mesoderm | 6.48e-10 | 9 |
male organism | 6.84e-09 | 22 |
male reproductive system | 6.84e-09 | 22 |
urogenital ridge | 2.82e-08 | 11 |
large intestine | 4.04e-08 | 11 |
internal genitalia | 6.81e-08 | 25 |
intraembryonic coelom | 1.16e-07 | 12 |
kidney | 1.49e-07 | 26 |
kidney mesenchyme | 1.49e-07 | 26 |
upper urinary tract | 1.49e-07 | 26 |
kidney rudiment | 1.49e-07 | 26 |
kidney field | 1.49e-07 | 26 |
gastrointestinal system | 1.75e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.73e-11 | 2 |