FFCP PHASE1:Hg19::chr11:35058300..35058313,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:35058300..35058313,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr11:35058300..35058313,- | |description=CAGE_peak_at_chr11:35058300..35058313,- | ||
|id=chr11:35058300..35058313,- | |id=chr11:35058300..35058313,- | ||
|ontology_enrichment_celltype=CL:0002057!2.45e-58!42;CL:0000860!3.47e-54!45;CL:0000766!3.10e-44!76;CL:0002009!1.18e-43!65;CL:0002194!7.67e-41!63;CL:0000576!7.67e-41!63;CL:0000040!7.67e-41!63;CL:0000559!7.67e-41!63;CL:0000557!1.17e-39!71;CL:0000738!1.76e-36!140;CL:0000839!2.09e-36!70;CL:0000763!3.21e-34!112;CL:0000049!3.21e-34!112;CL:0000037!8.34e-29!172;CL:0000566!8.34e-29!172;CL:0000988!5.91e-27!182;CL:0002087!1.16e-26!119;CL:0002032!9.43e-22!165;CL:0000837!9.43e-22!165;CL:0002031!5.27e-21!124;CL:0000767!4.40e-20!3;CL:0000842!1.16e-19!3;CL:0000224!6.78e-15!4;CL:0000134!3.50e-11!358;CL:0002320!7.25e-11!365;CL:0000080!4.15e-10!6;CL:0000219!9.50e-10!390;CL:0000451!1.74e-09!10;CL:0000784!2.12e-09!3;CL:0000048!2.08e-08!430;CL:0000723!3.22e-08!436;CL:0000034!5.69e-08!444;CL:0000094!7.49e-08!8;CL:0002393!2.01e-07!9;CL:0002397!2.01e-07!9;CL:0000990!6.55e-07!8 | |ontology_enrichment_celltype=CL:0002057!2.45e-58!42;CL:0000860!3.47e-54!45;CL:0000766!3.10e-44!76;CL:0002009!1.18e-43!65;CL:0002194!7.67e-41!63;CL:0000576!7.67e-41!63;CL:0000040!7.67e-41!63;CL:0000559!7.67e-41!63;CL:0000557!1.17e-39!71;CL:0000738!1.76e-36!140;CL:0000839!2.09e-36!70;CL:0000763!3.21e-34!112;CL:0000049!3.21e-34!112;CL:0000037!8.34e-29!172;CL:0000566!8.34e-29!172;CL:0000988!5.91e-27!182;CL:0002087!1.16e-26!119;CL:0002032!9.43e-22!165;CL:0000837!9.43e-22!165;CL:0002031!5.27e-21!124;CL:0000767!4.40e-20!3;CL:0000842!1.16e-19!3;CL:0000224!6.78e-15!4;CL:0000134!3.50e-11!358;CL:0002320!7.25e-11!365;CL:0000080!4.15e-10!6;CL:0000219!9.50e-10!390;CL:0000451!1.74e-09!10;CL:0000784!2.12e-09!3;CL:0000048!2.08e-08!430;CL:0000723!3.22e-08!436;CL:0000034!5.69e-08!444;CL:0000094!7.49e-08!8;CL:0002393!2.01e-07!9;CL:0002397!2.01e-07!9;CL:0000990!6.55e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.22e-27;33!CL:0002057;1.22e-27;33!CL:0000473;1.21e-22;39!CL:0000234;1.21e-22;39!CL:0000766;3.10e-22;69!CL:0000576;1.10e-21;48!CL:0002393;5.56e-21;6!CL:0002397;5.56e-21;6!CL:0002087;1.84e-10;104!CL:0000763;1.76e-09;100!CL:0001014;5.19e-08;2!CL:0001016;5.19e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.38e-44,42;CL:0002057,4.38e-44,42;CL:0000473,1.97e-38,48;CL:0000234,1.97e-38,48;CL:0002009,9.76e-35,61;CL:0000557,1.47e-31,67;CL:0002194,1.65e-30,59;CL:0000576,1.65e-30,59;CL:0000040,1.65e-30,59;CL:0000559,1.65e-30,59;CL:0000766,2.95e-29,72;CL:0000839,3.42e-27,66;CL:0000763,2.21e-22,108;CL:0000049,2.21e-22,108;CL:0000738,2.98e-20,136;CL:0002087,6.93e-18,115;CL:0002031,3.88e-17,120;CL:0000037,3.92e-16,168;CL:0000988,3.07e-15,177;CL:0002032,1.42e-14,161;CL:0000837,1.42e-14,161;CL:0002393,3.17e-14,9;CL:0002397,3.17e-14,9;CL:0001014,5.37e-08,2;CL:0001016,5.37e-08,2;CL:0000134,8.46e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.97e-28;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.22e-35!102;UBERON:0003061!7.22e-35!102;UBERON:0002371!8.94e-35!80;UBERON:0001474!4.44e-32!86;UBERON:0002193!2.29e-31!112;UBERON:0004765!1.01e-26!101;UBERON:0001434!1.01e-26!101;UBERON:0002405!5.66e-23!115;UBERON:0002204!1.66e-14!167;UBERON:0003081!4.81e-14!216;UBERON:0002384!1.96e-10!375 | |ontology_enrichment_uberon=UBERON:0002390!7.22e-35!102;UBERON:0003061!7.22e-35!102;UBERON:0002371!8.94e-35!80;UBERON:0001474!4.44e-32!86;UBERON:0002193!2.29e-31!112;UBERON:0004765!1.01e-26!101;UBERON:0001434!1.01e-26!101;UBERON:0002405!5.66e-23!115;UBERON:0002204!1.66e-14!167;UBERON:0003081!4.81e-14!216;UBERON:0002384!1.96e-10!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.02e-27,76;UBERON:0001474,1.28e-25,82;UBERON:0002390,9.26e-25,98;UBERON:0003061,9.26e-25,98;UBERON:0004765,3.01e-23,90;UBERON:0002405,1.83e-22,93;UBERON:0002193,2.33e-22,108;UBERON:0001434,8.24e-21,100;UBERON:0002204,6.30e-12,167;UBERON:0003081,3.09e-11,203 | |||
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|short_description=p@chr11:35058300..35058313,- | |short_description=p@chr11:35058300..35058313,- | ||
}} | }} |
Latest revision as of 21:47, 23 July 2015
Short description: | p@chr11:35058300..35058313, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:35058300..35058313, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.38e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.38e-44 | 42 |
defensive cell | 1.97e-38 | 48 |
phagocyte | 1.97e-38 | 48 |
macrophage dendritic cell progenitor | 9.76e-35 | 61 |
granulocyte monocyte progenitor cell | 1.47e-31 | 67 |
monopoietic cell | 1.65e-30 | 59 |
monocyte | 1.65e-30 | 59 |
monoblast | 1.65e-30 | 59 |
promonocyte | 1.65e-30 | 59 |
myeloid leukocyte | 2.95e-29 | 72 |
myeloid lineage restricted progenitor cell | 3.42e-27 | 66 |
myeloid cell | 2.21e-22 | 108 |
common myeloid progenitor | 2.21e-22 | 108 |
leukocyte | 2.98e-20 | 136 |
nongranular leukocyte | 6.93e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 3.88e-17 | 120 |
hematopoietic stem cell | 3.92e-16 | 168 |
hematopoietic cell | 3.07e-15 | 177 |
hematopoietic oligopotent progenitor cell | 1.42e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.42e-14 | 161 |
intermediate monocyte | 3.17e-14 | 9 |
CD14-positive, CD16-positive monocyte | 3.17e-14 | 9 |
CD1a-positive Langerhans cell | 5.37e-08 | 2 |
immature CD1a-positive Langerhans cell | 5.37e-08 | 2 |
mesenchymal cell | 8.46e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.02e-27 | 76 |
bone element | 1.28e-25 | 82 |
hematopoietic system | 9.26e-25 | 98 |
blood island | 9.26e-25 | 98 |
skeletal element | 3.01e-23 | 90 |
immune system | 1.83e-22 | 93 |
hemolymphoid system | 2.33e-22 | 108 |
skeletal system | 8.24e-21 | 100 |
musculoskeletal system | 6.30e-12 | 167 |
lateral plate mesoderm | 3.09e-11 | 203 |