FFCP PHASE1:Hg19::chr11:35248448..35248451,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:35248448..35248451,+
|short_description=p@chr11:35248448..35248451,+
|description=CAGE_peak_at_chr11:35248448..35248451,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:35248448..35248451,+ | |||
|description=CAGE_peak_at_chr11:35248448..35248451,+ | |||
|id=chr11:35248448..35248451,+ | |||
|ontology_enrichment_celltype=CL:0002031!1.23e-13!124;CL:0002057!8.13e-13!42;CL:0000557!2.72e-12!71;CL:0000738!1.36e-11!140;CL:0000860!1.45e-11!45;CL:0000839!2.27e-11!70;CL:0002087!3.78e-11!119;CL:0000766!6.79e-10!76;CL:0002009!8.60e-10!65;CL:0002032!2.96e-09!165;CL:0000837!2.96e-09!165;CL:0002194!3.50e-09!63;CL:0000576!3.50e-09!63;CL:0000040!3.50e-09!63;CL:0000559!3.50e-09!63;CL:0000037!4.43e-09!172;CL:0000566!4.43e-09!172;CL:0000988!5.83e-08!182;CL:0000763!7.42e-07!112;CL:0000049!7.42e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0002393;2.66e-14;6!CL:0002397;2.66e-14;6!CL:0000576;1.44e-11;48!CL:0001014;3.18e-11;2!CL:0001016;3.18e-11;2!CL:0000860;8.81e-09;33!CL:0002057;8.81e-09;33!CL:0002087;2.21e-08;104!CL:0000766;3.87e-08;69!CL:0000623;6.56e-08;3!CL:0000473;4.15e-07;39!CL:0000234;4.15e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.54e-17,42;CL:0002057,5.54e-17,42;CL:0002031,5.91e-16,120;CL:0002009,1.69e-15,61;CL:0000473,7.37e-15,48;CL:0000234,7.37e-15,48;CL:0000557,4.10e-14,67;CL:0000738,4.83e-14,136;CL:0002087,1.95e-13,115;CL:0002194,7.07e-12,59;CL:0000576,7.07e-12,59;CL:0000040,7.07e-12,59;CL:0000559,7.07e-12,59;CL:0002032,8.36e-12,161;CL:0000837,8.36e-12,161;CL:0000037,2.70e-11,168;CL:0001014,2.73e-11,2;CL:0001016,2.73e-11,2;CL:0000988,1.07e-10,177;CL:0000839,1.26e-10,66;CL:0002393,8.84e-10,9;CL:0002397,8.84e-10,9;CL:0000766,9.58e-10,72;CL:0000763,1.05e-08,108;CL:0000049,1.05e-08,108;CL:0000623,6.34e-08,3;CL:0000825,6.34e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.67e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!8.95e-12!101;UBERON:0001434!8.95e-12!101;UBERON:0002371!6.14e-11!80;UBERON:0002390!1.13e-09!102;UBERON:0003061!1.13e-09!102;UBERON:0001474!1.25e-09!86;UBERON:0002193!4.63e-08!112;UBERON:0002405!6.01e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.94e-12,76;UBERON:0001474,1.60e-11,82;UBERON:0004765,1.74e-10,90;UBERON:0002405,3.83e-10,93;UBERON:0002390,1.29e-09,98;UBERON:0003061,1.29e-09,98;UBERON:0001434,2.03e-09,100;UBERON:0002193,1.05e-08,108 | |||
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| ||
|short_description=p@chr11:35248448..35248451,+ | |||
}} | }} |
Latest revision as of 21:53, 23 July 2015
Short description: | p@chr11:35248448..35248451, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:35248448..35248451, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.54e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.54e-17 | 42 |
hematopoietic lineage restricted progenitor cell | 5.91e-16 | 120 |
macrophage dendritic cell progenitor | 1.69e-15 | 61 |
defensive cell | 7.37e-15 | 48 |
phagocyte | 7.37e-15 | 48 |
granulocyte monocyte progenitor cell | 4.10e-14 | 67 |
leukocyte | 4.83e-14 | 136 |
nongranular leukocyte | 1.95e-13 | 115 |
monopoietic cell | 7.07e-12 | 59 |
monocyte | 7.07e-12 | 59 |
monoblast | 7.07e-12 | 59 |
promonocyte | 7.07e-12 | 59 |
hematopoietic oligopotent progenitor cell | 8.36e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.36e-12 | 161 |
hematopoietic stem cell | 2.70e-11 | 168 |
CD1a-positive Langerhans cell | 2.73e-11 | 2 |
immature CD1a-positive Langerhans cell | 2.73e-11 | 2 |
hematopoietic cell | 1.07e-10 | 177 |
myeloid lineage restricted progenitor cell | 1.26e-10 | 66 |
intermediate monocyte | 8.84e-10 | 9 |
CD14-positive, CD16-positive monocyte | 8.84e-10 | 9 |
myeloid leukocyte | 9.58e-10 | 72 |
myeloid cell | 1.05e-08 | 108 |
common myeloid progenitor | 1.05e-08 | 108 |
natural killer cell | 6.34e-08 | 3 |
pro-NK cell | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.94e-12 | 76 |
bone element | 1.60e-11 | 82 |
skeletal element | 1.74e-10 | 90 |
immune system | 3.83e-10 | 93 |
hematopoietic system | 1.29e-09 | 98 |
blood island | 1.29e-09 | 98 |
skeletal system | 2.03e-09 | 100 |
hemolymphoid system | 1.05e-08 | 108 |