FFCP PHASE1:Hg19::chr11:35334901..35334922,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr11:35334901..35334922,- to FFCP PHASE1:Hg19::chr11:35334901..35334922,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:35334901..35334922,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr11:35334901..35334922,- | |||
|id=chr11:35334901..35334922,- | |||
|ontology_enrichment_celltype=CL:0002057!2.02e-72!42;CL:0000860!3.68e-67!45;CL:0002194!6.05e-49!63;CL:0000576!6.05e-49!63;CL:0000040!6.05e-49!63;CL:0000559!6.05e-49!63;CL:0002009!2.93e-47!65;CL:0000766!6.92e-46!76;CL:0000839!1.84e-43!70;CL:0000557!9.16e-43!71;CL:0002087!1.27e-40!119;CL:0000738!7.90e-38!140;CL:0002031!1.17e-31!124;CL:0000037!2.52e-29!172;CL:0000566!2.52e-29!172;CL:0000763!4.99e-29!112;CL:0000049!4.99e-29!112;CL:0000988!2.82e-27!182;CL:0002032!2.45e-25!165;CL:0000837!2.45e-25!165;CL:0000842!5.87e-14!3;CL:0000623!3.22e-13!3;CL:0000825!3.22e-13!3;CL:0000134!1.40e-11!358;CL:0002320!3.39e-11!365;CL:0000224!1.37e-10!4;CL:0000219!7.66e-10!390;CL:0000034!3.40e-09!444;CL:0002393!3.09e-08!9;CL:0002397!3.09e-08!9;CL:0000048!3.19e-08!430;CL:0000723!5.42e-08!436;CL:0000080!3.37e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-52;33!CL:0002057;1.36e-52;33!CL:0000473;6.29e-36;39!CL:0000234;6.29e-36;39!CL:0000576;1.74e-31;48!CL:0000766;1.67e-21;69!CL:0002087;2.16e-16;104!CL:0002393;1.08e-13;6!CL:0002397;1.08e-13;6!CL:0000226;2.00e-12;3!CL:0000842;2.00e-12;3!CL:0000763;2.05e-12;100!CL:0000738;9.55e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.05e-64,42;CL:0002057,2.05e-64,42;CL:0000473,5.09e-56,48;CL:0000234,5.09e-56,48;CL:0002194,2.95e-44,59;CL:0000576,2.95e-44,59;CL:0000040,2.95e-44,59;CL:0000559,2.95e-44,59;CL:0002009,9.74e-43,61;CL:0000766,4.53e-40,72;CL:0000839,2.45e-39,66;CL:0000557,1.02e-38,67;CL:0002087,5.55e-27,115;CL:0000763,7.53e-26,108;CL:0000049,7.53e-26,108;CL:0000738,7.47e-25,136;CL:0002031,1.77e-20,120;CL:0000037,1.55e-19,168;CL:0000988,2.20e-18,177;CL:0002032,2.21e-16,161;CL:0000837,2.21e-16,161;CL:0000226,2.00e-12,3;CL:0000842,2.00e-12,3;CL:0002393,2.56e-09,9;CL:0002397,2.56e-09,9;CL:0000134,1.62e-07,354;CL:0002320,2.66e-07,361;CL:0000034,5.23e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.11e-45;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.86e-37!80;UBERON:0002390!4.44e-35!102;UBERON:0003061!4.44e-35!102;UBERON:0001474!3.06e-34!86;UBERON:0002193!2.45e-31!112;UBERON:0004765!3.17e-28!101;UBERON:0001434!3.17e-28!101;UBERON:0002405!5.13e-24!115;UBERON:0002204!1.50e-14!167;UBERON:0003081!5.35e-14!216;UBERON:0002384!1.13e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.41e-34,76;UBERON:0002390,3.81e-32,98;UBERON:0003061,3.81e-32,98;UBERON:0001474,3.35e-31,82;UBERON:0002193,6.49e-29,108;UBERON:0004765,3.34e-28,90;UBERON:0002405,3.29e-27,93;UBERON:0001434,4.03e-25,100;UBERON:0003081,5.78e-14,203;UBERON:0002204,6.62e-14,167;UBERON:0000926,7.95e-08,315;UBERON:0004120,7.95e-08,315;UBERON:0006603,7.95e-08,315;UBERON:0002384,5.21e-07,371 | |||
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|short_description=p@chr11:35334901..35334922,- | |||
}} | }} |
Latest revision as of 21:57, 23 July 2015
Short description: | p@chr11:35334901..35334922, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:35334901..35334922, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.05e-64 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.05e-64 | 42 |
defensive cell | 5.09e-56 | 48 |
phagocyte | 5.09e-56 | 48 |
monopoietic cell | 2.95e-44 | 59 |
monocyte | 2.95e-44 | 59 |
monoblast | 2.95e-44 | 59 |
promonocyte | 2.95e-44 | 59 |
macrophage dendritic cell progenitor | 9.74e-43 | 61 |
myeloid leukocyte | 4.53e-40 | 72 |
myeloid lineage restricted progenitor cell | 2.45e-39 | 66 |
granulocyte monocyte progenitor cell | 1.02e-38 | 67 |
nongranular leukocyte | 5.55e-27 | 115 |
myeloid cell | 7.53e-26 | 108 |
common myeloid progenitor | 7.53e-26 | 108 |
leukocyte | 7.47e-25 | 136 |
hematopoietic lineage restricted progenitor cell | 1.77e-20 | 120 |
hematopoietic stem cell | 1.55e-19 | 168 |
hematopoietic cell | 2.20e-18 | 177 |
hematopoietic oligopotent progenitor cell | 2.21e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.21e-16 | 161 |
single nucleate cell | 2.00e-12 | 3 |
mononuclear cell | 2.00e-12 | 3 |
intermediate monocyte | 2.56e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.56e-09 | 9 |
mesenchymal cell | 1.62e-07 | 354 |
connective tissue cell | 2.66e-07 | 361 |
stem cell | 5.23e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.41e-34 | 76 |
hematopoietic system | 3.81e-32 | 98 |
blood island | 3.81e-32 | 98 |
bone element | 3.35e-31 | 82 |
hemolymphoid system | 6.49e-29 | 108 |
skeletal element | 3.34e-28 | 90 |
immune system | 3.29e-27 | 93 |
skeletal system | 4.03e-25 | 100 |
lateral plate mesoderm | 5.78e-14 | 203 |
musculoskeletal system | 6.62e-14 | 167 |
mesoderm | 7.95e-08 | 315 |
mesoderm-derived structure | 7.95e-08 | 315 |
presumptive mesoderm | 7.95e-08 | 315 |
connective tissue | 5.21e-07 | 371 |