FFCP PHASE1:Hg19::chr11:3875828..3875866,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:3875828..3875866,+ to FFCP PHASE1:Hg19::chr11:3875828..3875866,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000430222_5end | |||
|cluster_id=chr11:3875828..3875866,+ | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_ENST00000430222_5end | |||
|id=chr11:3875828..3875866,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.36e-53!172;CL:0000566!2.36e-53!172;CL:0000738!7.85e-50!140;CL:0000988!1.43e-49!182;CL:0002032!2.86e-49!165;CL:0000837!2.86e-49!165;CL:0002031!3.24e-45!124;CL:0002087!3.56e-44!119;CL:0000542!1.39e-38!53;CL:0000051!1.39e-38!53;CL:0000838!5.03e-38!52;CL:0000084!7.23e-19!25;CL:0000827!7.23e-19!25;CL:0000945!4.15e-18!24;CL:0000826!4.15e-18!24;CL:0000763!5.70e-16!112;CL:0000049!5.70e-16!112;CL:0000791!9.84e-15!18;CL:0000789!9.84e-15!18;CL:0002420!9.84e-15!18;CL:0002419!9.84e-15!18;CL:0000790!9.84e-15!18;CL:0000236!8.58e-12!14;CL:0000557!2.49e-11!71;CL:0000839!2.51e-11!70;CL:0000766!7.93e-11!76;CL:0002009!3.53e-10!65;CL:0000625!1.51e-09!11;CL:0002194!1.96e-09!63;CL:0000576!1.96e-09!63;CL:0000040!1.96e-09!63;CL:0000559!1.96e-09!63;CL:0002057!6.15e-08!42;CL:0002393!8.40e-07!9;CL:0002397!8.40e-07!9;CL:0000860!8.48e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.51e-36;53!CL:0000945;7.06e-30;24!CL:0000084;1.19e-29;25!CL:0000791;7.23e-26;18!CL:0000789;7.23e-26;18!CL:0002419;7.23e-26;18!CL:0000236;9.11e-20;13!CL:0000625;2.19e-16;11!CL:0002087;3.87e-15;104!CL:0000738;2.50e-10;136!CL:0000624;3.83e-10;6!CL:0000988;3.68e-09;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.24e-64,53;CL:0000051,3.24e-64,53;CL:0000838,3.65e-63,52;CL:0002087,2.47e-52,115;CL:0000738,9.80e-49,136;CL:0000037,1.53e-46,168;CL:0002031,3.27e-46,120;CL:0002032,1.12e-43,161;CL:0000837,1.12e-43,161;CL:0000988,6.68e-43,177;CL:0000945,6.18e-30,24;CL:0000826,6.18e-30,24;CL:0000084,6.73e-30,25;CL:0000827,6.73e-30,25;CL:0000791,5.07e-26,18;CL:0000789,5.07e-26,18;CL:0002420,5.07e-26,18;CL:0002419,5.07e-26,18;CL:0000790,5.07e-26,18;CL:0000236,3.81e-18,14;CL:0000625,2.22e-16,11;CL:0000134,5.62e-11,354;CL:0002320,2.38e-10,361;CL:0000624,2.64e-10,6;CL:0002393,2.71e-09,9;CL:0002397,2.71e-09,9;CL:0000219,3.42e-08,386 | |||
|ontology_enrichment_development_v019=CL:0000051;1.51e-36;53!CL:0000790;7.23e-26;18 | |||
|ontology_enrichment_disease=DOID:2531!2.71e-11!51;DOID:0060083!2.71e-11!51;DOID:1240!1.71e-07!39;DOID:0060058!7.24e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.34e-08;10!DOID:2531;5.97e-07;51!DOID:0060083;5.97e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.15e-11,51;DOID:0060083,2.15e-11,51;DOID:0060058,2.90e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.89e-17!102;UBERON:0003061!3.89e-17!102;UBERON:0002193!3.35e-16!112;UBERON:0002371!1.10e-09!80;UBERON:0007023!3.93e-09!115;UBERON:0003408!1.97e-08!10;UBERON:0002405!3.01e-08!115;UBERON:0001474!5.68e-08!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;7.45e-08;5!UBERON:0005057;7.45e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.40e-11,98;UBERON:0003061,9.40e-11,98;UBERON:0004177,2.10e-10,7;UBERON:0005057,2.10e-10,7;UBERON:0003408,5.27e-10,10;UBERON:0002193,1.18e-09,108;UBERON:0002384,1.67e-09,371;UBERON:0002370,1.31e-07,4;UBERON:0005058,1.31e-07,4;UBERON:0009113,1.31e-07,4;UBERON:0003295,1.31e-07,4;UBERON:0005562,1.31e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.96597234917155,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,2.67446920117829,2.13461532569859,2.04648031415566,0.393364276848904,2.68680578668049,0.619264493264304,0,0,0.369754010166788,1.31694240986513,1.42169232487422,0.293600439334847,1.10799081706375,1.00272223735071,0.651032612147555,1.56740831967947,1.29557466407592,1.28787783817093,0.145398238779565,0,0.727752183563449,0.464858073811369,0.411167888021826,0.309706370895104,0,0.256160706529101,0.236482229888585,0.344745680736619,0,1.35426486594342,0,0.545812300115692,0.224723484445085,0.306083892370903,0.641858054152187,1.27867425159808,0.329851300186716,0.598390972864896,0,0.580418477257168,0,0,0.502497330513487,0,0,0,1.10483290796269,0.949387162322653,2.11255286311942,2.12604299965044,1.25795187305026,1.12328631146495,0.450530678524519,0.32145117339416,4.56020389985998,3.18266683518544,2.19196984517561,3.51992488922645,3.82297027883492,2.66852776159066,2.13365111283254,3.2031678962881,5.17277195959035,2.64417949113945,7.63243003628291,4.55370375287559,4.69789751496751,6.49864487812889,0,0.560508562981536,0.790152254325231,4.13090517239049,3.93010762749165,1.64481199199607,5.68434084328306,3.91106719960308,6.62826928028627,0,5.23629147360316,4.41908861212256,3.98761010250518,4.06205795647523,5.25174410875268,4.94225520727537,1.97325485524411,2.48715016007264,4.92665245749589,4.89345658434799,5.88589821797369,4.18142095219907,4.30575502250752,6.89796888483458,3.77990190030893,3.54227568827304,2.86708872891687,3.25541726928209,2.85135613334512,3.16207750063323,4.73550461271348,8.74515085866421,3.31488152861624,2.46338399076314,2.21767417547206,3.20928234940209,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0.741568885568859,0.324547393654683,1.39303789839414,0.398873881556595,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0.286804595389004,0,0.132529768321485,0.348581828608555,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,7.94633578946371,0.122988438543114,0,0.548751427043128,1.1240175325762,0.100528972411631,0.555530670951178,0,0,0,0,0,0,0,0.190254152234598,0,0,4.18568910348575,0.468008530278475,1.93220510975347,0,0.335964256397719,0.141775097242386,0,0,0,0.492663237895943,0.264145302039678,0.621984346622316,1.00883967391873,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,1.00451418286425,4.21667878966063,0,0,0,0.144781306667579,0,0,1.34502172792233,1.97030760201927,2.58753089831421,1.66845947163673,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,2.80428461064202,2.02782359826544,3.03127571446259,1.66435439510497,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.276242966807689,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0.35667105148125,0,0.422215270595328,0,0,0.349934720244983,0.0962221127255121,0,2.17781969722645,0,0,0,0,0.229723400206959,0,2.29391162142713,0.569647187174163,2.62054953003568,3.29089818468955,1.29694662238543,0.540031437238115,2.37937552888281,0,0,0,1.30062222588003,2.16403819464667,4.83764534769216,4.3045093636782,3.19326994292507,2.10655907145603,1.69338866179106,0,0,0.228234679033192,0.626719583092093,0,0.169291777801603,0,0,1.27753871307098,0.343505344755765,0,0,0.500547425135725,1.56310476321632,0,1.23087398947712,1.6227340708559,0.66614393599564,0,0,0.293016358543788,0,0.780103689942349,0,3.81991175580304,0.890894042497916,2.76444631889309,0,0.422008249231538,0,0.16480387422676,0,0.19924798825107,1.38141957765574,0,0,1.23084805461069,0,0,0,0.511572370226872,0,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0.60298219312704,0,0.110579259931225,0,0.219385397153973,0,0.139423744278603,0.769502585037971,0,0,0,0,0.31900115973192,0,0,8.17546385565892,0.784901281975124,1.32969345520125,0.225595660617181,0.19606253431774,0,0,1.11255605286265,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0.741383633679017,0.939797545549098,0.067401132980677,0,0,1.64209310294099,0,0,0.394584402849391,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,3.20063754411784,0,0.677942222341597,0,0,0.189932387867636,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.136905378891993,0,0,2.62887354279315,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0.223171457441873,0,0,0,0,0.164831716762333,0,0,1.86281330544726,0,0.272406812223151,0,0,0,0.2249738915515,5.41661368190565,0.18224866997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| 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| ||
|short_description=p1@ENST00000430222 | |||
}} | }} |
Latest revision as of 22:07, 23 July 2015
Short description: | p1@ENST00000430222 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000430222_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000430222_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.24e-64 | 53 |
common lymphoid progenitor | 3.24e-64 | 53 |
lymphoid lineage restricted progenitor cell | 3.65e-63 | 52 |
nongranular leukocyte | 2.47e-52 | 115 |
leukocyte | 9.80e-49 | 136 |
hematopoietic stem cell | 1.53e-46 | 168 |
hematopoietic lineage restricted progenitor cell | 3.27e-46 | 120 |
hematopoietic oligopotent progenitor cell | 1.12e-43 | 161 |
hematopoietic multipotent progenitor cell | 1.12e-43 | 161 |
hematopoietic cell | 6.68e-43 | 177 |
lymphocyte of B lineage | 6.18e-30 | 24 |
pro-B cell | 6.18e-30 | 24 |
T cell | 6.73e-30 | 25 |
pro-T cell | 6.73e-30 | 25 |
mature alpha-beta T cell | 5.07e-26 | 18 |
alpha-beta T cell | 5.07e-26 | 18 |
immature T cell | 5.07e-26 | 18 |
mature T cell | 5.07e-26 | 18 |
immature alpha-beta T cell | 5.07e-26 | 18 |
B cell | 3.81e-18 | 14 |
CD8-positive, alpha-beta T cell | 2.22e-16 | 11 |
mesenchymal cell | 5.62e-11 | 354 |
connective tissue cell | 2.38e-10 | 361 |
CD4-positive, alpha-beta T cell | 2.64e-10 | 6 |
intermediate monocyte | 2.71e-09 | 9 |
CD14-positive, CD16-positive monocyte | 2.71e-09 | 9 |
motile cell | 3.42e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.40e-11 | 98 |
blood island | 9.40e-11 | 98 |
hemopoietic organ | 2.10e-10 | 7 |
immune organ | 2.10e-10 | 7 |
gland of gut | 5.27e-10 | 10 |
hemolymphoid system | 1.18e-09 | 108 |
connective tissue | 1.67e-09 | 371 |
thymus | 1.31e-07 | 4 |
hemolymphoid system gland | 1.31e-07 | 4 |
thymic region | 1.31e-07 | 4 |
pharyngeal gland | 1.31e-07 | 4 |
thymus primordium | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.15e-11 | 51 |
immune system cancer | 2.15e-11 | 51 |
lymphoma | 2.90e-08 | 10 |