FFCP PHASE1:Hg19::chr11:5949873..5949877,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:5949873..5949877,+ | |||
|description=CAGE_peak_at_chr11:5949873..5949877,+ | |||
|id=chr11:5949873..5949877,+ | |||
|ontology_enrichment_celltype=CL:1000415!1.20e-08!2;CL:0000054!1.73e-08!2;CL:0000137!1.73e-08!2;CL:0000092!1.73e-08!2;CL:0000242!1.86e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:1000415;6.43e-14;2!CL:0000054;1.21e-13;2!CL:0000137;1.21e-13;2!CL:0000092;1.21e-13;2!CL:0000123;1.37e-13;2!CL:0000242;1.37e-13;2!CL:0000322;1.19e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,6.43e-14,2;CL:0000054,1.21e-13,2;CL:0000137,1.21e-13,2;CL:0000092,1.21e-13,2;CL:0000242,1.37e-13,2;CL:0000322,1.19e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060085!1.16e-15!1;DOID:3165!1.16e-15!1;DOID:0060121!1.16e-15!1;DOID:2438!1.16e-15!1;DOID:4418!1.16e-15!1;DOID:1325!4.21e-09!7;DOID:3904!4.21e-09!7;DOID:3910!1.39e-08!2;DOID:200!1.73e-08!2;DOID:4305!1.73e-08!2;DOID:3905!2.86e-07!9 | |||
|ontology_enrichment_disease_v019=DOID:0060085;7.62e-26;1!DOID:3165;7.62e-26;1!DOID:0060121;7.62e-26;1!DOID:2438;7.62e-26;1!DOID:4418;7.62e-26;1!DOID:3910;8.28e-14;2!DOID:200;1.21e-13;2!DOID:4305;1.21e-13;2!DOID:0060072;1.80e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,7.62e-26,1;DOID:3165,7.62e-26,1;DOID:0060121,7.62e-26,1;DOID:2438,7.62e-26,1;DOID:4418,7.62e-26,1;DOID:3910,8.28e-14,2;DOID:200,1.21e-13,2;DOID:4305,1.21e-13,2;DOID:0060072,1.80e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001282!1.78e-15!1;UBERON:0009842!1.78e-15!1;UBERON:0003704!1.78e-15!1;UBERON:0001171!1.78e-15!1;UBERON:0001172!1.78e-15!1;UBERON:0002294!3.58e-09!7;UBERON:0001173!3.58e-09!7;UBERON:0004912!3.58e-09!7;UBERON:0004903!1.39e-08!2;UBERON:0002173!1.39e-08!2;UBERON:0002186!1.39e-08!2;UBERON:0002148!2.67e-08!2;UBERON:0009662!2.67e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;8.28e-14;2!UBERON:0002173;8.28e-14;2!UBERON:0002186;8.28e-14;2!UBERON:0002110;1.01e-09;3!UBERON:0004821;1.19e-09;3!UBERON:0007499;1.19e-09;3!UBERON:0003215;1.19e-09;3!UBERON:0010368;1.19e-09;3!UBERON:0009911;1.19e-09;3!UBERON:0002299;1.19e-09;3!UBERON:0006524;1.19e-09;3!UBERON:0008874;1.19e-09;3!UBERON:0002169;1.19e-09;3!UBERON:0004894;1.19e-09;3!UBERON:0009856;1.49e-07;4!UBERON:0000014;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,8.28e-14,2;UBERON:0002173,8.28e-14,2;UBERON:0002186,8.28e-14,2;UBERON:0002110,1.01e-09,3;UBERON:0006242,1.01e-09,3;UBERON:0004821,1.19e-09,3;UBERON:0003215,1.19e-09,3;UBERON:0010368,1.19e-09,3;UBERON:0009911,1.19e-09,3;UBERON:0002299,1.19e-09,3;UBERON:0006524,1.19e-09,3;UBERON:0008874,1.19e-09,3;UBERON:0002169,1.19e-09,3;UBERON:0004894,1.19e-09,3;UBERON:0000014,1.80e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.7560323971548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12493582569533,0,0,0,0,21.1468810661288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.8497646912801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.33958675004052,0,64.3364049197502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,11.6590862819787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.39097245915208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:5949873..5949877,+ | |||
}} |
Latest revision as of 23:11, 23 July 2015
Short description: | p@chr11:5949873..5949877, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:5949873..5949877, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 6.43e-14 | 2 |
bone matrix secreting cell | 1.21e-13 | 2 |
osteocyte | 1.21e-13 | 2 |
osteoclast | 1.21e-13 | 2 |
Merkel cell | 1.37e-13 | 2 |
pneumocyte | 1.19e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 8.28e-14 | 2 |
alveolar duct | 8.28e-14 | 2 |
bronchiole | 8.28e-14 | 2 |
gallbladder | 1.01e-09 | 3 |
gall bladder primordium | 1.01e-09 | 3 |
pulmonary alveolus epithelium | 1.19e-09 | 3 |
alveolus | 1.19e-09 | 3 |
pulmonary lobule | 1.19e-09 | 3 |
lobule | 1.19e-09 | 3 |
alveolus of lung | 1.19e-09 | 3 |
alveolar system | 1.19e-09 | 3 |
pulmonary acinus | 1.19e-09 | 3 |
alveolar sac | 1.19e-09 | 3 |
alveolar wall | 1.19e-09 | 3 |
zone of skin | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 7.62e-26 | 1 |
skin benign neoplasm | 7.62e-26 | 1 |
integumentary system benign neoplasm | 7.62e-26 | 1 |
dermis tumor | 7.62e-26 | 1 |
cutaneous fibrous histiocytoma | 7.62e-26 | 1 |
lung adenocarcinoma | 8.28e-14 | 2 |
giant cell tumor | 1.21e-13 | 2 |
bone giant cell tumor | 1.21e-13 | 2 |
benign neoplasm | 1.80e-07 | 4 |