FFCP PHASE1:Hg19::chr11:60810710..60810774,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:60810710..60810774,- | |||
|description=CAGE_peak_at_chr11:60810710..60810774,- | |description=CAGE_peak_at_chr11:60810710..60810774,- | ||
|id=chr11:60810710..60810774,- | |id=chr11:60810710..60810774,- | ||
|ontology_enrichment_celltype=CL:0000542!3.87e-47!53;CL:0000051!3.87e-47!53;CL:0000838!2.29e-45!52;CL:0000738!2.31e-25!140;CL:0002087!8.95e-24!119;CL:0000791!4.20e-23!18;CL:0000789!4.20e-23!18;CL:0002420!4.20e-23!18;CL:0002419!4.20e-23!18;CL:0000790!4.20e-23!18;CL:0000084!5.64e-23!25;CL:0000827!5.64e-23!25;CL:0002031!5.26e-21!124;CL:0000037!1.09e-18!172;CL:0000566!1.09e-18!172;CL:0000945!1.13e-18!24;CL:0000826!1.13e-18!24;CL:0002032!3.17e-18!165;CL:0000837!3.17e-18!165;CL:0000988!7.80e-17!182;CL:0000236!7.37e-16!14;CL:0000625!3.42e-15!11;CL:0000624!2.90e-11!6;CL:0000453!3.24e-07!5 | |ontology_enrichment_celltype=CL:0000542!3.87e-47!53;CL:0000051!3.87e-47!53;CL:0000838!2.29e-45!52;CL:0000738!2.31e-25!140;CL:0002087!8.95e-24!119;CL:0000791!4.20e-23!18;CL:0000789!4.20e-23!18;CL:0002420!4.20e-23!18;CL:0002419!4.20e-23!18;CL:0000790!4.20e-23!18;CL:0000084!5.64e-23!25;CL:0000827!5.64e-23!25;CL:0002031!5.26e-21!124;CL:0000037!1.09e-18!172;CL:0000566!1.09e-18!172;CL:0000945!1.13e-18!24;CL:0000826!1.13e-18!24;CL:0002032!3.17e-18!165;CL:0000837!3.17e-18!165;CL:0000988!7.80e-17!182;CL:0000236!7.37e-16!14;CL:0000625!3.42e-15!11;CL:0000624!2.90e-11!6;CL:0000453!3.24e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.42e-36;24!CL:0000542;2.71e-35;53!CL:0000236;1.97e-26;13!CL:0000084;4.15e-18;25!CL:0000791;2.17e-14;18!CL:0000789;2.17e-14;18!CL:0002419;2.17e-14;18!CL:0000453;1.60e-12;5!CL:0000624;8.65e-10;6!CL:0002087;2.01e-09;104!CL:0000625;8.19e-08;11!CL:0000990;5.80e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.31e-59,53;CL:0000051,4.31e-59,53;CL:0000838,4.02e-56,52;CL:0000945,3.23e-36,24;CL:0000826,3.23e-36,24;CL:0000236,1.44e-29,14;CL:0000738,2.97e-26,136;CL:0002087,8.73e-23,115;CL:0002031,1.98e-21,120;CL:0002032,7.27e-21,161;CL:0000837,7.27e-21,161;CL:0000037,1.21e-19,168;CL:0000988,3.23e-18,177;CL:0000084,3.93e-18,25;CL:0000827,3.93e-18,25;CL:0000791,2.47e-14,18;CL:0000789,2.47e-14,18;CL:0002420,2.47e-14,18;CL:0002419,2.47e-14,18;CL:0000790,2.47e-14,18;CL:0000453,1.38e-12,5;CL:0000624,7.25e-10,6;CL:0000785,1.28e-08,2;CL:0000955,1.28e-08,2;CL:0000818,1.28e-08,2;CL:0000954,1.28e-08,2;CL:0000816,1.28e-08,2;CL:0000625,1.03e-07,11;CL:0000990,5.37e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000051;2.71e-35;53!CL:0000790;2.17e-14;18!CL:0000954;1.06e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.12e-09!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr11:60810710..60810774,- | |short_description=p@chr11:60810710..60810774,- | ||
}} | }} |
Latest revision as of 23:21, 23 July 2015
Short description: | p@chr11:60810710..60810774, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:60810710..60810774, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.31e-59 | 53 |
common lymphoid progenitor | 4.31e-59 | 53 |
lymphoid lineage restricted progenitor cell | 4.02e-56 | 52 |
lymphocyte of B lineage | 3.23e-36 | 24 |
pro-B cell | 3.23e-36 | 24 |
B cell | 1.44e-29 | 14 |
leukocyte | 2.97e-26 | 136 |
nongranular leukocyte | 8.73e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 1.98e-21 | 120 |
hematopoietic oligopotent progenitor cell | 7.27e-21 | 161 |
hematopoietic multipotent progenitor cell | 7.27e-21 | 161 |
hematopoietic stem cell | 1.21e-19 | 168 |
hematopoietic cell | 3.23e-18 | 177 |
T cell | 3.93e-18 | 25 |
pro-T cell | 3.93e-18 | 25 |
mature alpha-beta T cell | 2.47e-14 | 18 |
alpha-beta T cell | 2.47e-14 | 18 |
immature T cell | 2.47e-14 | 18 |
mature T cell | 2.47e-14 | 18 |
immature alpha-beta T cell | 2.47e-14 | 18 |
Langerhans cell | 1.38e-12 | 5 |
CD4-positive, alpha-beta T cell | 7.25e-10 | 6 |
mature B cell | 1.28e-08 | 2 |
pre-B-II cell | 1.28e-08 | 2 |
transitional stage B cell | 1.28e-08 | 2 |
small pre-B-II cell | 1.28e-08 | 2 |
immature B cell | 1.28e-08 | 2 |
CD8-positive, alpha-beta T cell | 1.03e-07 | 11 |
conventional dendritic cell | 5.37e-07 | 8 |