FFCP PHASE1:Hg19::chr11:65239736..65239739,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:65239736..65239739,- | |||
|description=CAGE_peak_at_chr11:65239736..65239739,- | |description=CAGE_peak_at_chr11:65239736..65239739,- | ||
|id=chr11:65239736..65239739,- | |id=chr11:65239736..65239739,- | ||
|ontology_enrichment_celltype=CL:0000860!5.55e-31!45;CL:0002057!1.31e-27!42;CL:0000766!2.86e-24!76;CL:0000839!3.94e-23!70;CL:0000557!9.61e-21!71;CL:0002009!5.78e-19!65;CL:0002194!1.40e-18!63;CL:0000576!1.40e-18!63;CL:0000040!1.40e-18!63;CL:0000559!1.40e-18!63;CL:0000763!1.26e-17!112;CL:0000049!1.26e-17!112;CL:0002031!6.99e-16!124;CL:0000738!7.72e-15!140;CL:0002032!1.13e-13!165;CL:0000837!1.13e-13!165;CL:0000037!1.63e-12!172;CL:0000566!1.63e-12!172;CL:0002087!2.37e-11!119;CL:0000988!4.95e-11!182 | |ontology_enrichment_celltype=CL:0000860!5.55e-31!45;CL:0002057!1.31e-27!42;CL:0000766!2.86e-24!76;CL:0000839!3.94e-23!70;CL:0000557!9.61e-21!71;CL:0002009!5.78e-19!65;CL:0002194!1.40e-18!63;CL:0000576!1.40e-18!63;CL:0000040!1.40e-18!63;CL:0000559!1.40e-18!63;CL:0000763!1.26e-17!112;CL:0000049!1.26e-17!112;CL:0002031!6.99e-16!124;CL:0000738!7.72e-15!140;CL:0002032!1.13e-13!165;CL:0000837!1.13e-13!165;CL:0000037!1.63e-12!172;CL:0000566!1.63e-12!172;CL:0002087!2.37e-11!119;CL:0000988!4.95e-11!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.33e-49;33!CL:0002057;2.33e-49;33!CL:0000473;6.41e-35;39!CL:0000234;6.41e-35;39!CL:0000576;3.13e-24;48!CL:0000764;3.30e-18;2!CL:0000558;3.30e-18;2!CL:0000766;2.37e-16;69!CL:0000763;2.90e-07;100 | |ontology_enrichment_celltype_v019=CL:0000860;2.33e-49;33!CL:0002057;2.33e-49;33!CL:0000473;6.41e-35;39!CL:0000234;6.41e-35;39!CL:0000576;3.13e-24;48!CL:0000764;3.30e-18;2!CL:0000558;3.30e-18;2!CL:0000766;2.37e-16;69!CL:0000763;2.90e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.42e-41,42;CL:0002057,1.42e-41,42;CL:0000839,5.51e-37,66;CL:0000473,4.58e-36,48;CL:0000234,4.58e-36,48;CL:0002194,2.40e-28,59;CL:0000576,2.40e-28,59;CL:0000040,2.40e-28,59;CL:0000559,2.40e-28,59;CL:0000557,2.75e-28,67;CL:0002009,2.39e-27,61;CL:0000766,3.66e-26,72;CL:0000763,1.44e-21,108;CL:0000049,1.44e-21,108;CL:0002031,3.99e-19,120;CL:0000764,3.76e-18,2;CL:0000765,3.76e-18,2;CL:0000050,3.76e-18,2;CL:0000038,3.76e-18,2;CL:0000558,3.76e-18,2;CL:0000547,3.76e-18,2;CL:0000549,3.76e-18,2;CL:0000550,3.76e-18,2;CL:0000552,3.76e-18,2;CL:0002032,1.70e-13,161;CL:0000837,1.70e-13,161;CL:0002087,2.10e-13,115;CL:0000037,8.33e-13,168;CL:0000738,1.22e-12,136;CL:0000988,5.34e-12,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.41e-28;42!UBERON:0005754;7.18e-10;1 | |ontology_enrichment_development_v019=CL:0002057;4.41e-28;42!UBERON:0005754;7.18e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.72e-17!80;UBERON:0001474!3.91e-16!86;UBERON:0002390!7.21e-15!102;UBERON:0003061!7.21e-15!102;UBERON:0002193!1.65e-12!112;UBERON:0004765!3.92e-12!101;UBERON:0001434!3.92e-12!101;UBERON:0002405!4.19e-11!115 | |ontology_enrichment_uberon=UBERON:0002371!3.72e-17!80;UBERON:0001474!3.91e-16!86;UBERON:0002390!7.21e-15!102;UBERON:0003061!7.21e-15!102;UBERON:0002193!1.65e-12!112;UBERON:0004765!3.92e-12!101;UBERON:0001434!3.92e-12!101;UBERON:0002405!4.19e-11!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000996;3.91e-10;1!UBERON:0000998;7.18e-10;1!UBERON:0006868;7.18e-10;1!UBERON:0002134;1.61e-09;1!UBERON:0005208;1.61e-09;1!UBERON:0004145;1.61e-09;1!UBERON:0005946;1.61e-09;1!UBERON:0005965;1.61e-09;1!UBERON:0002078;1.61e-09;1 | |ontology_enrichment_uberon_v019=UBERON:0000996;3.91e-10;1!UBERON:0000998;7.18e-10;1!UBERON:0006868;7.18e-10;1!UBERON:0002134;1.61e-09;1!UBERON:0005208;1.61e-09;1!UBERON:0004145;1.61e-09;1!UBERON:0005946;1.61e-09;1!UBERON:0005965;1.61e-09;1!UBERON:0002078;1.61e-09;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.16e-24,76;UBERON:0001474,1.11e-22,82;UBERON:0004765,1.92e-20,90;UBERON:0002405,1.06e-19,93;UBERON:0002390,1.44e-18,98;UBERON:0003061,1.44e-18,98;UBERON:0001434,3.82e-18,100;UBERON:0002193,1.31e-16,108;UBERON:0000996,3.74e-10,1;UBERON:0003081,5.01e-10,203;UBERON:0002204,8.74e-10,167;UBERON:0000998,8.91e-10,1;UBERON:0006868,8.91e-10,1;UBERON:0002134,1.25e-09,1;UBERON:0005208,1.25e-09,1;UBERON:0005946,1.25e-09,1;UBERON:0005965,1.25e-09,1;UBERON:0002078,1.25e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0.290796477559129,0.377875943688809,0.727752183563449,0.697287110717054,1.6446715520873,2.78735733805593,1.1507695692886,0.512321413058201,1.18241114944293,2.75796544589295,0.645484683583826,1.35426486594342,0.941211697713023,0.545812300115692,0.674170453335254,3.36692281607993,0,1.91801137739712,0,0.598390972864896,0,1.16083695451434,1.13477044938228,1.86846674698672,2.51248665256743,1.0429658368404,1.3031330682307,0,0.736555271975129,3.16462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0.435758888184812,0.237270619111097,0.539325232640658,0.588664395376038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0.576479813667846,1.38866676769018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19259876645935,4.44440266742331,0,0,0,1.23649213977267,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0.398495976502139,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0.784250137270958,0.503464760927528,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0,0,0,0,0,0.242780379534093,0.394584402849391,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0.290268993867255,0.365446585430928,0.246346371159628,0.484945082442097,0,0,0,0,0,0,0,0,0,0.288180834308212,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95041333473328,0,0.13223260174269,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0.612691153526923,0.327872630709804,0,0,0,0,0,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0.438568099157414,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0.941917114206168,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11693525095465,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0.150962843566674,0,0,0,0.245148321753905,0,0,0,0,0,0,0.902410431630081,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0.275684698604535,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0.224263725161227,2.41859201457027,0.404234377916439,0.653150243690884,0,0,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,7.98908129022615,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0.290796477559129,0.377875943688809,0.727752183563449,0.697287110717054,1.6446715520873,2.78735733805593,1.1507695692886,0.512321413058201,1.18241114944293,2.75796544589295,0.645484683583826,1.35426486594342,0.941211697713023,0.545812300115692,0.674170453335254,3.36692281607993,0,1.91801137739712,0,0.598390972864896,0,1.16083695451434,1.13477044938228,1.86846674698672,2.51248665256743,1.0429658368404,1.3031330682307,0,0.736555271975129,3.16462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0.435758888184812,0.237270619111097,0.539325232640658,0.588664395376038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0.576479813667846,1.38866676769018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19259876645935,4.44440266742331,0,0,0,1.23649213977267,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0.398495976502139,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0.784250137270958,0.503464760927528,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0,0,0,0,0,0.242780379534093,0.394584402849391,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0.290268993867255,0.365446585430928,0.246346371159628,0.484945082442097,0,0,0,0,0,0,0,0,0,0.288180834308212,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95041333473328,0,0.13223260174269,0,0,0.213574825135389,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0.612691153526923,0.327872630709804,0,0,0,0,0,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0.438568099157414,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0.941917114206168,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11693525095465,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0.150962843566674,0,0,0,0.245148321753905,0,0,0,0,0,0,0.902410431630081,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0.275684698604535,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0.224263725161227,2.41859201457027,0.404234377916439,0.653150243690884,0,0,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,7.98908129022615,0.201273793591026,0 | ||
|short_description=p@chr11:65239736..65239739,- | |short_description=p@chr11:65239736..65239739,- | ||
}} | }} |
Latest revision as of 00:37, 24 July 2015
Short description: | p@chr11:65239736..65239739, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:65239736..65239739, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.16e-24 | 76 |
bone element | 1.11e-22 | 82 |
skeletal element | 1.92e-20 | 90 |
immune system | 1.06e-19 | 93 |
hematopoietic system | 1.44e-18 | 98 |
blood island | 1.44e-18 | 98 |
skeletal system | 3.82e-18 | 100 |
hemolymphoid system | 1.31e-16 | 108 |
vagina | 3.74e-10 | 1 |
lateral plate mesoderm | 5.01e-10 | 203 |
musculoskeletal system | 8.74e-10 | 167 |
seminal vesicle | 8.91e-10 | 1 |
seminal fluid secreting gland | 8.91e-10 | 1 |
tricuspid valve | 1.25e-09 | 1 |
right atrium valve | 1.25e-09 | 1 |
outflow tract of atrium | 1.25e-09 | 1 |
outflow part of right atrium | 1.25e-09 | 1 |
right cardiac atrium | 1.25e-09 | 1 |