FFCP PHASE1:Hg19::chr11:65307347..65307372,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:65307347..65307372,- | |||
|description=CAGE_peak_at_chr11:65307347..65307372,- | |description=CAGE_peak_at_chr11:65307347..65307372,- | ||
|id=chr11:65307347..65307372,- | |id=chr11:65307347..65307372,- | ||
|ontology_enrichment_celltype=CL:0000066!3.81e-16!254;CL:0002076!2.43e-14!43;CL:0002368!2.93e-13!13;CL:0002202!1.66e-10!9;CL:0002632!1.66e-10!9;CL:0000223!8.33e-09!59;CL:0000240!1.27e-07!6;CL:0000311!1.27e-07!6;CL:0000079!1.27e-07!6;CL:0000237!1.27e-07!6;CL:0000036!1.27e-07!6;CL:0000357!1.27e-07!6;CL:0000114!1.27e-07!6;CL:0002322!8.07e-07!5 | |ontology_enrichment_celltype=CL:0000066!3.81e-16!254;CL:0002076!2.43e-14!43;CL:0002368!2.93e-13!13;CL:0002202!1.66e-10!9;CL:0002632!1.66e-10!9;CL:0000223!8.33e-09!59;CL:0000240!1.27e-07!6;CL:0000311!1.27e-07!6;CL:0000079!1.27e-07!6;CL:0000237!1.27e-07!6;CL:0000036!1.27e-07!6;CL:0000357!1.27e-07!6;CL:0000114!1.27e-07!6;CL:0002322!8.07e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002202;1.44e-11;9!CL:0002632;1.44e-11;9!CL:0002368;2.63e-10;13!CL:0002577;1.91e-09;3!CL:0002322;2.18e-09;5!CL:0002328;2.25e-09;3!CL:0002076;4.76e-09;42!CL:0000240;3.97e-08;6!CL:0000311;3.97e-08;6!CL:0000079;3.97e-08;6!CL:0000237;3.97e-08;6!CL:0000575;3.65e-07;2!CL:0002159;3.81e-07;14!CL:0000082;5.58e-07;19!CL:0002535;6.36e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.93e-17,253;CL:0002076,2.48e-12,42;CL:0002202,1.02e-11,9;CL:0002632,1.02e-11,9;CL:0002368,2.05e-10,13;CL:0002328,1.17e-09,3;CL:0002322,1.33e-09,5;CL:0002577,1.48e-09,3;CL:0000240,5.09e-08,6;CL:0000311,5.09e-08,6;CL:0000079,5.09e-08,6;CL:0000237,5.09e-08,6;CL:0000036,5.09e-08,6;CL:0000357,5.09e-08,6;CL:0000114,5.09e-08,6;CL:0000223,5.80e-08,58;CL:0000575,3.95e-07,2;CL:0002159,4.51e-07,14;CL:0000082,4.53e-07,19;CL:0002535,5.18e-07,2;CL:0002077,7.60e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;3.97e-08;6!CL:0000114;3.97e-08;6 | |||
|ontology_enrichment_disease=DOID:305!6.93e-07!106 | |ontology_enrichment_disease=DOID:305!6.93e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:5093;6.04e-07;4!DOID:1612;6.04e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.33e-10,106;DOID:5093,5.11e-07,4;DOID:1612,5.11e-07,4;DOID:0050687,8.43e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000464!4.78e-10!104;UBERON:0004119!5.98e-10!169;UBERON:0000925!5.98e-10!169;UBERON:0006595!5.98e-10!169;UBERON:0007196!1.51e-08!14;UBERON:0001558!1.51e-08!14;UBERON:0000064!9.99e-08!219;UBERON:0000062!1.05e-07!511;UBERON:0000466!1.54e-07!126;UBERON:0005156!1.94e-07!59;UBERON:0000990!1.94e-07!59;UBERON:0005631!2.57e-07!14;UBERON:0000158!2.57e-07!14;UBERON:0000468!5.39e-07!659;UBERON:0003135!7.19e-07!11;UBERON:0003101!7.45e-07!22;UBERON:0000079!7.45e-07!22 | |ontology_enrichment_uberon=UBERON:0000464!4.78e-10!104;UBERON:0004119!5.98e-10!169;UBERON:0000925!5.98e-10!169;UBERON:0006595!5.98e-10!169;UBERON:0007196!1.51e-08!14;UBERON:0001558!1.51e-08!14;UBERON:0000064!9.99e-08!219;UBERON:0000062!1.05e-07!511;UBERON:0000466!1.54e-07!126;UBERON:0005156!1.94e-07!59;UBERON:0000990!1.94e-07!59;UBERON:0005631!2.57e-07!14;UBERON:0000158!2.57e-07!14;UBERON:0000468!5.39e-07!659;UBERON:0003135!7.19e-07!11;UBERON:0003101!7.45e-07!22;UBERON:0000079!7.45e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.25e-09;3!UBERON:0002031;2.25e-09;3!UBERON:0005178;1.16e-07;34!UBERON:0002224;1.16e-07;34!UBERON:0004807;1.62e-07;22!UBERON:0005181;1.78e-07;35!UBERON:0000964;3.05e-07;4!UBERON:0010409;3.05e-07;4!UBERON:0001987;3.55e-07;4!UBERON:0004802;5.58e-07;19!UBERON:0000115;5.58e-07;19!UBERON:0006955;6.36e-07;2!UBERON:0004801;6.36e-07;2!UBERON:0006562;9.48e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.17e-09,3;UBERON:0002031,1.17e-09,3;UBERON:0005631,2.32e-09,14;UBERON:0000158,2.32e-09,14;UBERON:0005178,1.56e-08,34;UBERON:0002224,1.56e-08,34;UBERON:0005181,3.19e-08,35;UBERON:0000915,4.81e-08,52;UBERON:0005157,8.83e-08,47;UBERON:0001987,2.93e-07,4;UBERON:0004340,2.93e-07,4;UBERON:0004119,3.27e-07,160;UBERON:0000925,3.27e-07,160;UBERON:0006595,3.27e-07,160;UBERON:0000964,4.31e-07,4;UBERON:0010409,4.31e-07,4;UBERON:0004348,4.31e-07,4;UBERON:0005427,4.31e-07,4;UBERON:0004802,4.53e-07,19;UBERON:0000115,4.53e-07,19;UBERON:0006955,5.18e-07,2;UBERON:0004801,5.18e-07,2;UBERON:0003124,9.06e-07,7;UBERON:0007196,9.95e-07,15;UBERON:0001558,9.95e-07,15 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,2.79120467188971,0,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.35536979583142,1.8072355126695,1.84877005083394,0,0,0.293600439334847,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,2.5500670180478,5.19098219898201,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48875241714027,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0.355009592516614,0.10075209822764,0,1.15956511897978,0.545492241181669,0.286804595389004,2.5614478287215,1.85541675650079,1.85910308591229,0.725627385107593,3.02785021050754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09750285408626,5.62008766288098,0.904760751704678,1.29623823221941,0,1.03993478527958,0,0,0.117408694235822,0,0,0,1.58040879591855,3.43394464837949,0,0,0.445893486866185,0,0,0.992425680696705,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,22.1283127155769,1.66435439510497,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.40101294060657,1.74953878978203,0,0,0,0,0.15403067420883,0.784349769176855,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0.671624264166535,0,0.261435451024901,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,0.127612712494584,1.4162089319777,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.865999014529609,4.02181365321472,2.17781969722645,0.0941438007767792,0.86101074534246,3.36942951335251,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,3.18552280775341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,2.8071081061233,0,0,0,0.284136146806413,6.92359005739301,0.890894042497916,4.30024982938925,0.994147647766298,0,0,0,0,0,0,1.76352923497993,0.102268682502155,0,0,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0.520855522170466,1.48681999993533,0,9.21726931112547,6.35634125731916,3.30942754475111,0.689486746482929,0,0,0,0.361789315876224,0,0,0,0,0,0.41827123283581,0.0769502585037971,0,0,0,0,1.27600463892768,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,1.18375320854817,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0.391969589657511,5.04943398166335,0.17472666824203,0,0,0,0,1.35784623083787,0,0.225980740780532,0,0,0.0633107959558787,3.12882212375685,0.240476460754601,1.49417096317547,0,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0.525774708558629,0.558564802544508,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,3.3758161177654,4.40126197111148,5.40072439437941,0.2249738915515,0.77380195455795,0,0.335434687599266,0.236417121897595,0.524545881349981,0,0,4.03021914370835,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,2.17372795087739,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0.468334905806882,5.50699908721136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,1.50109113962448,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0.132864840313363,0,0,0,1.69049698686902,0,0,0,0,0,9.65168603264167,3.11038630016486,0,0,0,0,0,0,0,0,0,0,13.609702720853,0,0,0.256916900385838,0,0,0.205116364240755,0,0.207471757392654,0.161475645631851,0,0,3.18518253038899,0,0,0,0,0,0,0,1.56302802246618,0,0,0.295712172434091,0,0,0.206686796501184,0.126831620387814,0,0,0.496211178389294,0,3.06629826335029,0,0,1.82089681270989,1.13831095675649,0.177404740325278,0,0,0,0.0657727735628491,0.709163045303809,2.78078504730173,0.156986185701028,0.471346769748006,0,0,0,0,0,0,0,0,0,0.414432328326074,0.51215543128185,0.691259661814092,0,0,0,0.423387050190929,7.7896335304977,0,0,0,8.73537079175662,0.853425474875886,0,0,0,0,5.38060765962843,0,0,0,0,0,0.308696632431779,0,0.470317296361523,0.245148321753905,35.5871586123455,0,0,0,0,0.281951753939561,0.0644578879735772,0,0.178553938605658,0,0,0,0.458729283404541,0,0.473314686579554,0.0679914901909147,0.872701380680755,0,0,0,0,0,0,0,1.52983244612973,1.3360870263278,0,0.752122617877125,0.303114792872958,0.535928260312357,0,0,0.426467963801962,0,0.0645889098360061,0,0,0.190941474834495,0,3.48346796635138,0.684466602170562,1.01028079521881,0.143444410785353,0.665320713092027,0.0814032686109745,3.84218445159776,0,0,0,0,0.406896178315738,0,0,0 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| ||
|short_description=p@chr11:65307347..65307372,- | |short_description=p@chr11:65307347..65307372,- | ||
}} | }} |
Latest revision as of 00:41, 24 July 2015
Short description: | p@chr11:65307347..65307372, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:65307347..65307372, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.93e-17 | 253 |
endo-epithelial cell | 2.48e-12 | 42 |
epithelial cell of tracheobronchial tree | 1.02e-11 | 9 |
epithelial cell of lower respiratory tract | 1.02e-11 | 9 |
respiratory epithelial cell | 2.05e-10 | 13 |
bronchial epithelial cell | 1.17e-09 | 3 |
embryonic stem cell | 1.33e-09 | 5 |
placental epithelial cell | 1.48e-09 | 3 |
stratified squamous epithelial cell | 5.09e-08 | 6 |
keratin accumulating cell | 5.09e-08 | 6 |
stratified epithelial cell | 5.09e-08 | 6 |
keratinizing barrier epithelial cell | 5.09e-08 | 6 |
epithelial fate stem cell | 5.09e-08 | 6 |
stratified epithelial stem cell | 5.09e-08 | 6 |
surface ectodermal cell | 5.09e-08 | 6 |
endodermal cell | 5.80e-08 | 58 |
corneal epithelial cell | 3.95e-07 | 2 |
general ecto-epithelial cell | 4.51e-07 | 14 |
epithelial cell of lung | 4.53e-07 | 19 |
epithelial cell of cervix | 5.18e-07 | 2 |
ecto-epithelial cell | 7.60e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.17e-09 | 3 |
epithelium of bronchus | 1.17e-09 | 3 |
extraembryonic membrane | 2.32e-09 | 14 |
membranous layer | 2.32e-09 | 14 |
thoracic cavity element | 1.56e-08 | 34 |
thoracic cavity | 1.56e-08 | 34 |
thoracic segment organ | 3.19e-08 | 35 |
thoracic segment of trunk | 4.81e-08 | 52 |
epithelial fold | 8.83e-08 | 47 |
placenta | 2.93e-07 | 4 |
allantois | 2.93e-07 | 4 |
endoderm-derived structure | 3.27e-07 | 160 |
endoderm | 3.27e-07 | 160 |
presumptive endoderm | 3.27e-07 | 160 |
cornea | 4.31e-07 | 4 |
eye surface | 4.31e-07 | 4 |
optic eminence | 4.31e-07 | 4 |
corneal primordium | 4.31e-07 | 4 |
respiratory tract epithelium | 4.53e-07 | 19 |
lung epithelium | 4.53e-07 | 19 |
uterine epithelium | 5.18e-07 | 2 |
cervix epithelium | 5.18e-07 | 2 |
chorion | 9.06e-07 | 7 |
tracheobronchial tree | 9.95e-07 | 15 |
lower respiratory tract | 9.95e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.33e-10 | 106 |
thoracic cancer | 5.11e-07 | 4 |
breast cancer | 5.11e-07 | 4 |
cell type cancer | 8.43e-07 | 143 |