FFCP PHASE1:Hg19::chr11:66079886..66079899,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:66079886..66079899,- | |||
|coexpression_cluster_id=C1150 | |coexpression_cluster_id=C1150 | ||
|description=CAGE_peak_at_chr11:66079886..66079899,- | |description=CAGE_peak_at_chr11:66079886..66079899,- | ||
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|ontology_enrichment_celltype=CL:0000860!3.32e-38!45;CL:0002087!5.38e-35!119;CL:0002057!8.39e-35!42;CL:0000738!1.38e-31!140;CL:0002031!2.62e-30!124;CL:0000037!7.20e-27!172;CL:0000566!7.20e-27!172;CL:0002032!4.85e-25!165;CL:0000837!4.85e-25!165;CL:0000988!5.63e-25!182;CL:0002194!6.63e-24!63;CL:0000576!6.63e-24!63;CL:0000040!6.63e-24!63;CL:0000559!6.63e-24!63;CL:0002009!9.55e-23!65;CL:0000839!1.27e-22!70;CL:0000557!4.19e-22!71;CL:0000766!8.89e-21!76;CL:0000763!4.06e-15!112;CL:0000049!4.06e-15!112;CL:0000542!1.14e-09!53;CL:0000051!1.14e-09!53;CL:0000838!3.90e-09!52;CL:0000063!1.33e-07!578;CL:0000219!3.14e-07!390;CL:0000134!4.01e-07!358 | |ontology_enrichment_celltype=CL:0000860!3.32e-38!45;CL:0002087!5.38e-35!119;CL:0002057!8.39e-35!42;CL:0000738!1.38e-31!140;CL:0002031!2.62e-30!124;CL:0000037!7.20e-27!172;CL:0000566!7.20e-27!172;CL:0002032!4.85e-25!165;CL:0000837!4.85e-25!165;CL:0000988!5.63e-25!182;CL:0002194!6.63e-24!63;CL:0000576!6.63e-24!63;CL:0000040!6.63e-24!63;CL:0000559!6.63e-24!63;CL:0002009!9.55e-23!65;CL:0000839!1.27e-22!70;CL:0000557!4.19e-22!71;CL:0000766!8.89e-21!76;CL:0000763!4.06e-15!112;CL:0000049!4.06e-15!112;CL:0000542!1.14e-09!53;CL:0000051!1.14e-09!53;CL:0000838!3.90e-09!52;CL:0000063!1.33e-07!578;CL:0000219!3.14e-07!390;CL:0000134!4.01e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.52e-70;33!CL:0002057;2.52e-70;33!CL:0000473;4.80e-47;39!CL:0000234;4.80e-47;39!CL:0000576;7.83e-34;48!CL:0000766;7.50e-18;69!CL:0002087;1.72e-15;104!CL:0000763;2.18e-08;100!CL:0000738;1.18e-07;136!CL:0000946;2.74e-07;1!CL:0002127;2.74e-07;1!CL:0000911;2.74e-07;1!CL:0000222;2.74e-07;1!CL:0000814;2.74e-07;1!CL:0000786;2.74e-07;1 | |ontology_enrichment_celltype_v019=CL:0000860;2.52e-70;33!CL:0002057;2.52e-70;33!CL:0000473;4.80e-47;39!CL:0000234;4.80e-47;39!CL:0000576;7.83e-34;48!CL:0000766;7.50e-18;69!CL:0002087;1.72e-15;104!CL:0000763;2.18e-08;100!CL:0000738;1.18e-07;136!CL:0000946;2.74e-07;1!CL:0002127;2.74e-07;1!CL:0000911;2.74e-07;1!CL:0000222;2.74e-07;1!CL:0000814;2.74e-07;1!CL:0000786;2.74e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.30e-61,42;CL:0002057,9.30e-61,42;CL:0000473,1.26e-52,48;CL:0000234,1.26e-52,48;CL:0002194,3.08e-41,59;CL:0000576,3.08e-41,59;CL:0000040,3.08e-41,59;CL:0000559,3.08e-41,59;CL:0002009,9.08e-40,61;CL:0000839,1.78e-36,66;CL:0000557,7.08e-36,67;CL:0000766,4.03e-33,72;CL:0002087,1.16e-30,115;CL:0002031,3.47e-29,120;CL:0000738,3.50e-25,136;CL:0000763,9.72e-21,108;CL:0000049,9.72e-21,108;CL:0002032,1.66e-20,161;CL:0000837,1.66e-20,161;CL:0000037,1.92e-19,168;CL:0000988,3.36e-18,177;CL:0002127,1.95e-07,1;CL:0000914,1.95e-07,1;CL:0000911,1.95e-07,1;CL:0000814,1.95e-07,1;CL:0002042,1.95e-07,1;CL:0002039,1.95e-07,1;CL:0002040,1.95e-07,1;CL:0002041,1.95e-07,1;CL:0000134,2.58e-07,354;CL:0002320,4.54e-07,361;CL:0000946,4.61e-07,1;CL:0000786,4.61e-07,1;CL:0000980,4.61e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;4.99e-41;42!CL:0000049;8.63e-07;108 | |ontology_enrichment_development_v019=CL:0002057;4.99e-41;42!CL:0000049;8.63e-07;108 | ||
|ontology_enrichment_disease=DOID:162!4.14e-11!235;DOID:14566!1.85e-10!239;DOID:305!2.40e-10!106;DOID:0050687!1.45e-08!143;DOID:3119!2.99e-08!14;DOID:0050686!4.57e-07!137 | |ontology_enrichment_disease=DOID:162!4.14e-11!235;DOID:14566!1.85e-10!239;DOID:305!2.40e-10!106;DOID:0050687!1.45e-08!143;DOID:3119!2.99e-08!14;DOID:0050686!4.57e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:3111;2.74e-07;1!DOID:3603;2.74e-07;1 | |ontology_enrichment_disease_v019=DOID:3111;2.74e-07;1!DOID:3603;2.74e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3111,3.20e-07,1;DOID:3603,3.20e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.63e-20!102;UBERON:0003061!1.63e-20!102;UBERON:0002371!4.82e-18!80;UBERON:0002193!5.35e-18!112;UBERON:0001474!6.83e-18!86;UBERON:0002405!4.78e-17!115;UBERON:0004765!3.49e-13!101;UBERON:0001434!3.49e-13!101 | |ontology_enrichment_uberon=UBERON:0002390!1.63e-20!102;UBERON:0003061!1.63e-20!102;UBERON:0002371!4.82e-18!80;UBERON:0002193!5.35e-18!112;UBERON:0001474!6.83e-18!86;UBERON:0002405!4.78e-17!115;UBERON:0004765!3.49e-13!101;UBERON:0001434!3.49e-13!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.57e-31,76;UBERON:0002405,2.88e-30,93;UBERON:0001474,1.32e-28,82;UBERON:0002390,1.68e-28,98;UBERON:0003061,1.68e-28,98;UBERON:0004765,1.05e-25,90;UBERON:0002193,1.87e-25,108;UBERON:0001434,9.96e-23,100;UBERON:0002204,6.40e-12,167;UBERON:0003081,2.13e-11,203;UBERON:0000926,3.24e-07,315;UBERON:0004120,3.24e-07,315;UBERON:0006603,3.24e-07,315;UBERON:0002370,3.31e-07,4;UBERON:0005058,3.31e-07,4;UBERON:0009113,3.31e-07,4;UBERON:0003295,3.31e-07,4;UBERON:0005562,3.31e-07,4;UBERON:0002384,9.81e-07,371 | |||
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|short_description=p@chr11:66079886..66079899,- | |short_description=p@chr11:66079886..66079899,- | ||
}} | }} |
Latest revision as of 01:01, 24 July 2015
Short description: | p@chr11:66079886..66079899, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:66079886..66079899, - |
Coexpression cluster: | C1150_CD14_thymus_hepatoblastoma_CD4_CD34_Natural_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.57e-31 | 76 |
immune system | 2.88e-30 | 93 |
bone element | 1.32e-28 | 82 |
hematopoietic system | 1.68e-28 | 98 |
blood island | 1.68e-28 | 98 |
skeletal element | 1.05e-25 | 90 |
hemolymphoid system | 1.87e-25 | 108 |
skeletal system | 9.96e-23 | 100 |
musculoskeletal system | 6.40e-12 | 167 |
lateral plate mesoderm | 2.13e-11 | 203 |
mesoderm | 3.24e-07 | 315 |
mesoderm-derived structure | 3.24e-07 | 315 |
presumptive mesoderm | 3.24e-07 | 315 |
thymus | 3.31e-07 | 4 |
hemolymphoid system gland | 3.31e-07 | 4 |
thymic region | 3.31e-07 | 4 |
pharyngeal gland | 3.31e-07 | 4 |
thymus primordium | 3.31e-07 | 4 |
connective tissue | 9.81e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 3.20e-07 | 1 |
mucinous cystadenocarcinoma | 3.20e-07 | 1 |