FFCP PHASE1:Hg19::chr11:66673538..66673570,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:66673538..66673570,-
|short_description=p@chr11:66673538..66673570,-
|description=CAGE_peak_at_chr11:66673538..66673570,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:66673538..66673570,- | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_at_chr11:66673538..66673570,- | |||
|id=chr11:66673538..66673570,- | |||
|ontology_enrichment_celltype=CL:0000223!5.70e-20!59;CL:0002076!9.68e-16!43;CL:0000066!4.04e-13!254;CL:0002368!1.83e-11!13;CL:0000220!1.33e-10!246;CL:0002321!2.38e-10!248;CL:0002159!1.02e-09!13;CL:0002202!2.02e-07!9;CL:0002632!2.02e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.78e-18;14!CL:0002076;2.32e-16;42!CL:0002368;2.94e-16;13!CL:0002202;4.89e-14;9!CL:0002632;4.89e-14;9!CL:0002328;1.28e-11;3!CL:0000307;1.45e-11;3!CL:0002621;2.56e-11;3!CL:0002166;1.18e-10;3!CL:0002077;2.28e-10;34!CL:0000362;1.45e-09;9!CL:0000240;1.80e-09;6!CL:0000311;1.80e-09;6!CL:0000079;1.80e-09;6!CL:0000237;1.80e-09;6!CL:0000244;2.40e-08;4!CL:0000731;2.40e-08;4!CL:0000317;4.60e-08;2!CL:1000448;4.60e-08;2!CL:0002308;4.60e-08;2!CL:0002140;4.60e-08;2!CL:0002327;4.95e-08;4!CL:0002251;2.16e-07;20!CL:0002549;2.54e-07;2!CL:0000312;7.69e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.62e-19,42;CL:0002159,1.32e-18,14;CL:0000223,1.74e-18,58;CL:0000066,1.63e-17,253;CL:0002368,3.13e-16,13;CL:0002202,5.07e-14,9;CL:0002632,5.07e-14,9;CL:0002077,5.78e-12,34;CL:0002328,1.20e-11,3;CL:0000068,1.64e-11,3;CL:0000069,1.64e-11,3;CL:0000307,1.64e-11,3;CL:0000377,1.64e-11,3;CL:0002621,3.04e-11,3;CL:0002166,8.37e-11,3;CL:0000362,1.34e-09,9;CL:0000240,1.72e-09,6;CL:0000311,1.72e-09,6;CL:0000079,1.72e-09,6;CL:0000237,1.72e-09,6;CL:0000036,1.72e-09,6;CL:0000357,1.72e-09,6;CL:0000114,1.72e-09,6;CL:0002321,1.50e-08,250;CL:0000244,2.75e-08,4;CL:0000731,2.75e-08,4;CL:0000317,4.30e-08,2;CL:1000448,4.30e-08,2;CL:0002308,4.30e-08,2;CL:0002140,4.30e-08,2;CL:0002327,4.96e-08,4;CL:0002549,1.96e-07,2;CL:0002251,2.41e-07,20;CL:0000312,7.33e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;8.72e-12;58!CL:0000377;1.45e-11;3!CL:0000357;1.80e-09;6!CL:0000114;1.80e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.31e-11!169;UBERON:0000925!3.31e-11!169;UBERON:0006595!3.31e-11!169;UBERON:0001007!1.84e-08!155;UBERON:0001555!1.84e-08!155;UBERON:0007026!1.84e-08!155;UBERON:0000165!2.19e-08!28;UBERON:0000930!2.19e-08!28;UBERON:0002365!1.08e-07!31;UBERON:0002330!1.08e-07!31;UBERON:0001004!2.52e-07!72;UBERON:0000166!3.50e-07!21;UBERON:0005911!9.81e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.28e-11;3!UBERON:0002031;1.28e-11;3!UBERON:0001949;2.56e-11;3!UBERON:0002365;2.36e-10;31!UBERON:0002330;2.36e-10;31!UBERON:0000486;6.37e-10;12!UBERON:0007196;4.19e-08;15!UBERON:0001558;4.19e-08;15!UBERON:0001708;4.33e-08;4!UBERON:0008895;4.33e-08;4!UBERON:0002419;4.60e-08;2!UBERON:0007771;4.60e-08;2!UBERON:0003297;4.60e-08;2!UBERON:0001821;4.60e-08;2!UBERON:0003487;4.60e-08;2!UBERON:0001820;4.60e-08;2!UBERON:0001911;4.95e-08;4!UBERON:0005629;2.54e-07;2!UBERON:0005358;2.54e-07;2!UBERON:0001886;2.54e-07;2!UBERON:0004086;2.54e-07;2!UBERON:0005282;2.54e-07;2!UBERON:0005281;2.54e-07;2!UBERON:0010371;3.23e-07;31!UBERON:0002185;4.18e-07;5!UBERON:0004807;5.74e-07;22!UBERON:0000365;9.55e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.20e-11,3;UBERON:0002031,1.20e-11,3;UBERON:0001949,3.04e-11,3;UBERON:0002365,1.75e-10,31;UBERON:0002330,1.75e-10,31;UBERON:0004119,1.94e-08,160;UBERON:0000925,1.94e-08,160;UBERON:0006595,1.94e-08,160;UBERON:0001708,3.35e-08,4;UBERON:0008895,3.35e-08,4;UBERON:0007196,4.28e-08,15;UBERON:0001558,4.28e-08,15;UBERON:0002419,4.30e-08,2;UBERON:0007771,4.30e-08,2;UBERON:0003297,4.30e-08,2;UBERON:0001821,4.30e-08,2;UBERON:0003487,4.30e-08,2;UBERON:0001820,4.30e-08,2;UBERON:0005089,4.30e-08,2;UBERON:0005088,4.30e-08,2;UBERON:0001911,4.96e-08,4;UBERON:0005333,4.96e-08,4;UBERON:0008425,4.96e-08,4;UBERON:0005311,4.96e-08,4;UBERON:0005911,7.57e-08,82;UBERON:0005629,1.96e-07,2;UBERON:0005358,1.96e-07,2;UBERON:0001886,1.96e-07,2;UBERON:0004086,1.96e-07,2;UBERON:0005282,1.96e-07,2;UBERON:0005281,1.96e-07,2;UBERON:0002185,4.02e-07,5;UBERON:0001004,7.69e-07,74 | |||
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| ||
|short_description=p@chr11:66673538..66673570,- | |||
}} | }} |
Latest revision as of 01:24, 24 July 2015
Short description: | p@chr11:66673538..66673570, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:66673538..66673570, - |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.20e-11 | 3 |
epithelium of bronchus | 1.20e-11 | 3 |
gingival epithelium | 3.04e-11 | 3 |
exocrine gland | 1.75e-10 | 31 |
exocrine system | 1.75e-10 | 31 |
endoderm-derived structure | 1.94e-08 | 160 |
endoderm | 1.94e-08 | 160 |
presumptive endoderm | 1.94e-08 | 160 |
jaw skeleton | 3.35e-08 | 4 |
splanchnocranium | 3.35e-08 | 4 |
tracheobronchial tree | 4.28e-08 | 15 |
lower respiratory tract | 4.28e-08 | 15 |
skin gland | 4.30e-08 | 2 |
epidermis gland | 4.30e-08 | 2 |
gland of integumental system | 4.30e-08 | 2 |
sebaceous gland | 4.30e-08 | 2 |
skin sebaceous gland | 4.30e-08 | 2 |
sweat gland | 4.30e-08 | 2 |
sweat gland placode | 4.30e-08 | 2 |
sebaceous gland placode | 4.30e-08 | 2 |
mammary gland | 4.96e-08 | 4 |
mammary bud | 4.96e-08 | 4 |
mammary ridge | 4.96e-08 | 4 |
mammary placode | 4.96e-08 | 4 |
endo-epithelium | 7.57e-08 | 82 |
vascular plexus | 1.96e-07 | 2 |
ventricle of nervous system | 1.96e-07 | 2 |
choroid plexus | 1.96e-07 | 2 |
brain ventricle | 1.96e-07 | 2 |
ventricular system of brain | 1.96e-07 | 2 |
ventricular system of central nervous system | 1.96e-07 | 2 |
bronchus | 4.02e-07 | 5 |
respiratory system | 7.69e-07 | 74 |