FFCP PHASE1:Hg19::chr11:66673538..66673570,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:66673538..66673570,- to FFCP PHASE1:Hg19::chr11:66673538..66673570,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:66673538..66673570,- | |||
|coexpression_cluster_id=C226 | |||
|description=CAGE_peak_at_chr11:66673538..66673570,- | |||
|id=chr11:66673538..66673570,- | |||
|ontology_enrichment_celltype=CL:0000223!5.70e-20!59;CL:0002076!9.68e-16!43;CL:0000066!4.04e-13!254;CL:0002368!1.83e-11!13;CL:0000220!1.33e-10!246;CL:0002321!2.38e-10!248;CL:0002159!1.02e-09!13;CL:0002202!2.02e-07!9;CL:0002632!2.02e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.78e-18;14!CL:0002076;2.32e-16;42!CL:0002368;2.94e-16;13!CL:0002202;4.89e-14;9!CL:0002632;4.89e-14;9!CL:0002328;1.28e-11;3!CL:0000307;1.45e-11;3!CL:0002621;2.56e-11;3!CL:0002166;1.18e-10;3!CL:0002077;2.28e-10;34!CL:0000362;1.45e-09;9!CL:0000240;1.80e-09;6!CL:0000311;1.80e-09;6!CL:0000079;1.80e-09;6!CL:0000237;1.80e-09;6!CL:0000244;2.40e-08;4!CL:0000731;2.40e-08;4!CL:0000317;4.60e-08;2!CL:1000448;4.60e-08;2!CL:0002308;4.60e-08;2!CL:0002140;4.60e-08;2!CL:0002327;4.95e-08;4!CL:0002251;2.16e-07;20!CL:0002549;2.54e-07;2!CL:0000312;7.69e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.62e-19,42;CL:0002159,1.32e-18,14;CL:0000223,1.74e-18,58;CL:0000066,1.63e-17,253;CL:0002368,3.13e-16,13;CL:0002202,5.07e-14,9;CL:0002632,5.07e-14,9;CL:0002077,5.78e-12,34;CL:0002328,1.20e-11,3;CL:0000068,1.64e-11,3;CL:0000069,1.64e-11,3;CL:0000307,1.64e-11,3;CL:0000377,1.64e-11,3;CL:0002621,3.04e-11,3;CL:0002166,8.37e-11,3;CL:0000362,1.34e-09,9;CL:0000240,1.72e-09,6;CL:0000311,1.72e-09,6;CL:0000079,1.72e-09,6;CL:0000237,1.72e-09,6;CL:0000036,1.72e-09,6;CL:0000357,1.72e-09,6;CL:0000114,1.72e-09,6;CL:0002321,1.50e-08,250;CL:0000244,2.75e-08,4;CL:0000731,2.75e-08,4;CL:0000317,4.30e-08,2;CL:1000448,4.30e-08,2;CL:0002308,4.30e-08,2;CL:0002140,4.30e-08,2;CL:0002327,4.96e-08,4;CL:0002549,1.96e-07,2;CL:0002251,2.41e-07,20;CL:0000312,7.33e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;8.72e-12;58!CL:0000377;1.45e-11;3!CL:0000357;1.80e-09;6!CL:0000114;1.80e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.31e-11!169;UBERON:0000925!3.31e-11!169;UBERON:0006595!3.31e-11!169;UBERON:0001007!1.84e-08!155;UBERON:0001555!1.84e-08!155;UBERON:0007026!1.84e-08!155;UBERON:0000165!2.19e-08!28;UBERON:0000930!2.19e-08!28;UBERON:0002365!1.08e-07!31;UBERON:0002330!1.08e-07!31;UBERON:0001004!2.52e-07!72;UBERON:0000166!3.50e-07!21;UBERON:0005911!9.81e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.28e-11;3!UBERON:0002031;1.28e-11;3!UBERON:0001949;2.56e-11;3!UBERON:0002365;2.36e-10;31!UBERON:0002330;2.36e-10;31!UBERON:0000486;6.37e-10;12!UBERON:0007196;4.19e-08;15!UBERON:0001558;4.19e-08;15!UBERON:0001708;4.33e-08;4!UBERON:0008895;4.33e-08;4!UBERON:0002419;4.60e-08;2!UBERON:0007771;4.60e-08;2!UBERON:0003297;4.60e-08;2!UBERON:0001821;4.60e-08;2!UBERON:0003487;4.60e-08;2!UBERON:0001820;4.60e-08;2!UBERON:0001911;4.95e-08;4!UBERON:0005629;2.54e-07;2!UBERON:0005358;2.54e-07;2!UBERON:0001886;2.54e-07;2!UBERON:0004086;2.54e-07;2!UBERON:0005282;2.54e-07;2!UBERON:0005281;2.54e-07;2!UBERON:0010371;3.23e-07;31!UBERON:0002185;4.18e-07;5!UBERON:0004807;5.74e-07;22!UBERON:0000365;9.55e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.20e-11,3;UBERON:0002031,1.20e-11,3;UBERON:0001949,3.04e-11,3;UBERON:0002365,1.75e-10,31;UBERON:0002330,1.75e-10,31;UBERON:0004119,1.94e-08,160;UBERON:0000925,1.94e-08,160;UBERON:0006595,1.94e-08,160;UBERON:0001708,3.35e-08,4;UBERON:0008895,3.35e-08,4;UBERON:0007196,4.28e-08,15;UBERON:0001558,4.28e-08,15;UBERON:0002419,4.30e-08,2;UBERON:0007771,4.30e-08,2;UBERON:0003297,4.30e-08,2;UBERON:0001821,4.30e-08,2;UBERON:0003487,4.30e-08,2;UBERON:0001820,4.30e-08,2;UBERON:0005089,4.30e-08,2;UBERON:0005088,4.30e-08,2;UBERON:0001911,4.96e-08,4;UBERON:0005333,4.96e-08,4;UBERON:0008425,4.96e-08,4;UBERON:0005311,4.96e-08,4;UBERON:0005911,7.57e-08,82;UBERON:0005629,1.96e-07,2;UBERON:0005358,1.96e-07,2;UBERON:0001886,1.96e-07,2;UBERON:0004086,1.96e-07,2;UBERON:0005282,1.96e-07,2;UBERON:0005281,1.96e-07,2;UBERON:0002185,4.02e-07,5;UBERON:0001004,7.69e-07,74 | |||
|phase1_expression=0,1.71280419112787,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0.495065411840187,2.65117900582333,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,5.51652734687356,9.33738348212575,16.2691764473387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,8.37879163072847,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4662572514208,0.993943903390637,0,0.662045904066094,0.286836620748814,0,0,0,0,0,0,0.163461903113459,2.57307626996383,1.72852777344,0,0,0,0.149448680551801,0,0,0,0.816616685019573,0.368502951935304,0.413303124703062,0,0,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0,0,0,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.1843473012255,6.54590689418003,5.16248271700207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87285243752816,1.96565443335525,1.18157981336281,0,0,0,8.34102169105554,5.62008766288098,3.61904300681871,4.72201070308501,0,0,1.44331342025273,0,0,0.144366447761074,0,0,0,0,0,0,0,1.87467667973554,5.37542810236351,5.38745369521069,2.23896306757121,2.61570544662566,3.83382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0.43596006883328,0.4400297149257,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0.542530047399471,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0.771048469013278,0,0.246381468041427,1.03850885836724,0.232420756919918,0,6.41620704970512,2.11786274552562,0,0,0,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0.254876273045038,1.66215201785745,0,0,0,0,0,0,0.103041011647722,0,0,6.89118645595407,5.20048196829217,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.0852266274161009,0,1.32227932288782,0.768760269460425,6.38063562472921,0.6069466851333,0,0.31481234683064,0.6970372701606,0,0,0.869932992075073,0.37064843820784,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0.421258456238981,0,1.46228093778771,0,0,0,0,0,0,0,0.578775534266688,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0.349934720244983,5.09977197445214,12.73574323518,8.71127878890581,0,5.16606447205476,0,6.20802214951346,2.29723400206959,0,0,0,0,0,0,0,0,0,1.92495971052672,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1249555075237,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,1.44999915086959,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.189559738885464,0,0,0,0.330991955875499,0.941798755221676,0,0,0.832048038078832,0,3.33174151208884,0,0,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0.775912131907355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.787831823072237,0.494495150286999,0.539228350833479,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0,0,0.236417121897595,0,0.211200673038813,5.55790751931819,0,0,0,0,0,0,0,0,0,0.170388021785422,0,1.02586563574658,2.65013777824443,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,1.31149052283922,0,0,0,0,0,0,0,0,0,0,0,10.1164302470214,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0.466311601748341,0.295710299979268,0.955780602982214,0,0.155262956876259,1.24411862352257,0.265841714557995,0,0,0,0,0,0.214821114084977,0.464033759878494,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0.308801447160972,0,6.89087669188936,0,0,0,0,0.303859956177382,0,0,0,0.163565394255844,0,0,1.05656061679314,0,0,0,0.567515953566836,0,1.81843360035278,2.48830904013189,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,1.57036349601641,0.235939446695481,0.917142992608395,0.115525666150338,0,1.3807198521202,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0.177404740325278,0,0.171488009437418,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,1.03608082081518,0,0,0,0,0,0,0,0.62041277132864,0.955538938977433,0,0.588901401691458,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0,0,0.357107877211315,4.94052820401969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0.18378979906969,0,0,0,0,0,0.852935927603924,0,0,0.124149428591716,0.112131862580613,0,0.202117188958219,1.08858373948481,0,0.404112318087525,0.358611026963382,0,0.0814032686109745,0,0,0.359300808426348,0,0,0.813792356631477,0,0,0 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| ||
|short_description=p@chr11:66673538..66673570,- | |||
}} | }} |
Latest revision as of 01:24, 24 July 2015
Short description: | p@chr11:66673538..66673570, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:66673538..66673570, - |
Coexpression cluster: | C226_Corneal_Keratinocyte_Esophageal_Urothelial_Mammary_Bronchial_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.20e-11 | 3 |
epithelium of bronchus | 1.20e-11 | 3 |
gingival epithelium | 3.04e-11 | 3 |
exocrine gland | 1.75e-10 | 31 |
exocrine system | 1.75e-10 | 31 |
endoderm-derived structure | 1.94e-08 | 160 |
endoderm | 1.94e-08 | 160 |
presumptive endoderm | 1.94e-08 | 160 |
jaw skeleton | 3.35e-08 | 4 |
splanchnocranium | 3.35e-08 | 4 |
tracheobronchial tree | 4.28e-08 | 15 |
lower respiratory tract | 4.28e-08 | 15 |
skin gland | 4.30e-08 | 2 |
epidermis gland | 4.30e-08 | 2 |
gland of integumental system | 4.30e-08 | 2 |
sebaceous gland | 4.30e-08 | 2 |
skin sebaceous gland | 4.30e-08 | 2 |
sweat gland | 4.30e-08 | 2 |
sweat gland placode | 4.30e-08 | 2 |
sebaceous gland placode | 4.30e-08 | 2 |
mammary gland | 4.96e-08 | 4 |
mammary bud | 4.96e-08 | 4 |
mammary ridge | 4.96e-08 | 4 |
mammary placode | 4.96e-08 | 4 |
endo-epithelium | 7.57e-08 | 82 |
vascular plexus | 1.96e-07 | 2 |
ventricle of nervous system | 1.96e-07 | 2 |
choroid plexus | 1.96e-07 | 2 |
brain ventricle | 1.96e-07 | 2 |
ventricular system of brain | 1.96e-07 | 2 |
ventricular system of central nervous system | 1.96e-07 | 2 |
bronchus | 4.02e-07 | 5 |
respiratory system | 7.69e-07 | 74 |