FFCP PHASE1:Hg19::chr11:69294647..69294668,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=39bp_to_ENST00000542064_5end | |association_with_transcript=39bp_to_ENST00000542064_5end | ||
|cluster_id=chr11:69294647..69294668,- | |||
|coexpression_cluster_id=C201 | |coexpression_cluster_id=C201 | ||
|description=CAGE_peak_1_at_ENST00000542064_5end | |description=CAGE_peak_1_at_ENST00000542064_5end | ||
|id=chr11:69294647..69294668,- | |id=chr11:69294647..69294668,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002563;7.93e-13;4!CL:0002253;3.18e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.17e-13,4;CL:0002253,3.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;6.82e-13;1 | |||
|ontology_enrichment_disease=DOID:5093!7.59e-19!4;DOID:1612!7.59e-19!4;DOID:305!1.14e-14!106;DOID:7!1.81e-11!39;DOID:299!2.13e-10!25;DOID:0050687!1.38e-09!143 | |ontology_enrichment_disease=DOID:5093!7.59e-19!4;DOID:1612!7.59e-19!4;DOID:305!1.14e-14!106;DOID:7!1.81e-11!39;DOID:299!2.13e-10!25;DOID:0050687!1.38e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:5093;3.95e-27;4!DOID:1612;3.95e-27;4!DOID:299;8.38e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.78e-27,4;DOID:1612,3.78e-27,4;DOID:299,8.38e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0005409!4.61e-22!35;UBERON:0004921!5.48e-22!129;UBERON:0004185!5.48e-22!129;UBERON:0000160!1.43e-21!27;UBERON:0001007!2.81e-20!155;UBERON:0001555!2.81e-20!155;UBERON:0007026!2.81e-20!155;UBERON:0000059!4.01e-20!11;UBERON:0004119!5.06e-18!169;UBERON:0000925!5.06e-18!169;UBERON:0006595!5.06e-18!169;UBERON:0004907!4.09e-15!5;UBERON:0000077!1.31e-13!130;UBERON:0001155!4.78e-13!9;UBERON:0001052!4.58e-11!4;UBERON:0002294!2.75e-10!7;UBERON:0001173!2.75e-10!7;UBERON:0004912!2.75e-10!7;UBERON:0009497!7.22e-10!25;UBERON:0000015!7.22e-10!25;UBERON:0002423!7.22e-10!25;UBERON:0006235!7.22e-10!25;UBERON:0004161!7.22e-10!25;UBERON:0003929!3.20e-09!54;UBERON:0009854!2.37e-08!23;UBERON:0001046!4.90e-08!19;UBERON:0001041!1.35e-07!98;UBERON:0000310!1.43e-07!10;UBERON:0009856!2.79e-07!26;UBERON:0000481!3.57e-07!347;UBERON:0002110!6.76e-07!3;UBERON:0006242!6.76e-07!3;UBERON:0001443!7.00e-07!11 | |ontology_enrichment_uberon=UBERON:0005409!4.61e-22!35;UBERON:0004921!5.48e-22!129;UBERON:0004185!5.48e-22!129;UBERON:0000160!1.43e-21!27;UBERON:0001007!2.81e-20!155;UBERON:0001555!2.81e-20!155;UBERON:0007026!2.81e-20!155;UBERON:0000059!4.01e-20!11;UBERON:0004119!5.06e-18!169;UBERON:0000925!5.06e-18!169;UBERON:0006595!5.06e-18!169;UBERON:0004907!4.09e-15!5;UBERON:0000077!1.31e-13!130;UBERON:0001155!4.78e-13!9;UBERON:0001052!4.58e-11!4;UBERON:0002294!2.75e-10!7;UBERON:0001173!2.75e-10!7;UBERON:0004912!2.75e-10!7;UBERON:0009497!7.22e-10!25;UBERON:0000015!7.22e-10!25;UBERON:0002423!7.22e-10!25;UBERON:0006235!7.22e-10!25;UBERON:0004161!7.22e-10!25;UBERON:0003929!3.20e-09!54;UBERON:0009854!2.37e-08!23;UBERON:0001046!4.90e-08!19;UBERON:0001041!1.35e-07!98;UBERON:0000310!1.43e-07!10;UBERON:0009856!2.79e-07!26;UBERON:0000481!3.57e-07!347;UBERON:0002110!6.76e-07!3;UBERON:0006242!6.76e-07!3;UBERON:0001443!7.00e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;4.64e-77;17!UBERON:0005409;4.62e-60;22!UBERON:0000059;2.28e-51;11!UBERON:0004907;4.11e-37;5!UBERON:0004921;1.30e-36;33!UBERON:0001155;9.15e-33;9!UBERON:0001052;1.36e-26;4!UBERON:0002108;7.82e-22;4!UBERON:0001555;1.60e-13;54!UBERON:0001154;6.82e-13;1!UBERON:0001153;6.82e-13;1!UBERON:0009854;6.82e-13;1!UBERON:0001242;7.93e-13;4!UBERON:0001262;7.93e-13;4!UBERON:0004786;7.93e-13;4!UBERON:0004808;7.93e-13;4!UBERON:0001277;7.93e-13;4!UBERON:0001007;4.51e-12;81!UBERON:0000310;3.10e-11;10!UBERON:0001443;2.90e-10;11!UBERON:0000485;1.04e-07;7!UBERON:0003929;1.04e-07;7!UBERON:0003350;7.55e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.81e-77,17;UBERON:0005409,5.51e-53,25;UBERON:0000059,2.20e-51,11;UBERON:0004907,4.30e-37,5;UBERON:0001155,8.86e-33,9;UBERON:0001052,1.42e-26,4;UBERON:0002108,8.40e-22,4;UBERON:0001046,3.32e-15,19;UBERON:0004921,6.42e-15,118;UBERON:0001154,6.82e-13,1;UBERON:0001153,6.82e-13,1;UBERON:0001045,6.82e-13,1;UBERON:0001242,8.17e-13,4;UBERON:0001262,8.17e-13,4;UBERON:0004786,8.17e-13,4;UBERON:0004808,8.17e-13,4;UBERON:0001277,8.17e-13,4;UBERON:0001007,7.78e-12,145;UBERON:0001555,7.78e-12,145;UBERON:0007026,7.78e-12,145;UBERON:0000310,3.04e-11,10;UBERON:0004119,1.45e-10,160;UBERON:0000925,1.45e-10,160;UBERON:0006595,1.45e-10,160;UBERON:0001443,2.85e-10,11;UBERON:0011216,3.08e-08,223;UBERON:0003350,7.66e-07,8 | |||
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| ||
|short_description=p1@ENST00000542064 | |short_description=p1@ENST00000542064 | ||
}} | }} |
Latest revision as of 01:57, 24 July 2015
Short description: | p1@ENST00000542064 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000542064_5end |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | 39bp_to_ENST00000542064_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.17e-13 | 4 |
epithelial cell of large intestine | 3.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.81e-77 | 17 |
gastrointestinal system | 5.51e-53 | 25 |
large intestine | 2.20e-51 | 11 |
lower digestive tract | 4.30e-37 | 5 |
colon | 8.86e-33 | 9 |
rectum | 1.42e-26 | 4 |
small intestine | 8.40e-22 | 4 |
hindgut | 3.32e-15 | 19 |
subdivision of digestive tract | 6.42e-15 | 118 |
vermiform appendix | 6.82e-13 | 1 |
caecum | 6.82e-13 | 1 |
midgut | 6.82e-13 | 1 |
intestinal mucosa | 8.17e-13 | 4 |
wall of intestine | 8.17e-13 | 4 |
gastrointestinal system mucosa | 8.17e-13 | 4 |
gastrointestinal system epithelium | 8.17e-13 | 4 |
intestinal epithelium | 8.17e-13 | 4 |
digestive system | 7.78e-12 | 145 |
digestive tract | 7.78e-12 | 145 |
primitive gut | 7.78e-12 | 145 |
breast | 3.04e-11 | 10 |
endoderm-derived structure | 1.45e-10 | 160 |
endoderm | 1.45e-10 | 160 |
presumptive endoderm | 1.45e-10 | 160 |
chest | 2.85e-10 | 11 |
organ system subdivision | 3.08e-08 | 223 |
epithelium of mucosa | 7.66e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.78e-27 | 4 |
breast cancer | 3.78e-27 | 4 |
adenocarcinoma | 8.38e-08 | 25 |