FFCP PHASE1:Hg19::chr11:94959186..94959199,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:94959186..94959199,-
|short_description=p@chr11:94959186..94959199,-
|description=CAGE_peak_at_chr11:94959186..94959199,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:94959186..94959199,- | |||
|description=CAGE_peak_at_chr11:94959186..94959199,- | |||
|id=chr11:94959186..94959199,- | |||
|ontology_enrichment_celltype=CL:0000838!1.81e-11!52;CL:0000542!4.84e-11!53;CL:0000051!4.84e-11!53;CL:0000791!1.25e-10!18;CL:0000789!1.25e-10!18;CL:0002420!1.25e-10!18;CL:0002419!1.25e-10!18;CL:0000790!1.25e-10!18;CL:0000624!1.89e-07!6;CL:0002087!4.22e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000624;3.76e-22;6!CL:0002623;6.99e-16;3!CL:0000815;1.27e-11;2!CL:0000792;1.27e-11;2!CL:0002677;1.27e-11;2!CL:0000791;4.68e-10;18!CL:0000789;4.68e-10;18!CL:0002419;4.68e-10;18!CL:0000236;9.05e-10;13!CL:0000622;9.83e-10;5!CL:0000542;7.77e-09;53!CL:0000154;3.46e-08;6!CL:0000898;5.02e-08;3!CL:0000623;1.00e-07;3!CL:0000084;4.55e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.42e-22,6;CL:0002623,4.10e-16,3;CL:0000838,2.69e-14,52;CL:0000542,5.62e-14,53;CL:0000051,5.62e-14,53;CL:0000815,8.83e-12,2;CL:0000792,8.83e-12,2;CL:0002677,8.83e-12,2;CL:0000791,4.86e-10,18;CL:0000789,4.86e-10,18;CL:0002420,4.86e-10,18;CL:0002419,4.86e-10,18;CL:0000790,4.86e-10,18;CL:0000622,7.17e-10,5;CL:0000236,3.30e-09,14;CL:0000154,2.67e-08,6;CL:0000898,3.95e-08,3;CL:0000623,8.19e-08,3;CL:0000825,8.19e-08,3;CL:0000084,4.67e-07,25;CL:0000827,4.67e-07,25;CL:0002087,6.42e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;4.68e-10;18!CL:0000051;7.77e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!4.14e-09!34;UBERON:0002791!6.85e-09!33;UBERON:0007023!8.18e-09!115;UBERON:0002780!8.61e-09!41;UBERON:0001890!8.61e-09!41;UBERON:0006240!8.61e-09!41;UBERON:0002020!9.20e-09!34;UBERON:0003528!9.20e-09!34;UBERON:0003080!2.15e-08!42;UBERON:0001869!2.60e-08!32;UBERON:0001017!6.90e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;3.63e-11;2!UBERON:0001044;3.46e-08;6!UBERON:0003293;3.46e-08;6!UBERON:0003294;3.46e-08;6!UBERON:0010047;3.46e-08;6!UBERON:0003408;3.46e-08;6!UBERON:0000167;3.46e-08;6!UBERON:0003978;1.00e-07;3!UBERON:0000946;1.00e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,4.72e-11,2;UBERON:0001044,2.67e-08,6;UBERON:0003293,2.67e-08,6;UBERON:0003294,2.67e-08,6;UBERON:0010047,2.67e-08,6;UBERON:0000167,2.67e-08,6;UBERON:0003978,1.19e-07,3;UBERON:0009751,1.19e-07,3;UBERON:0000946,1.19e-07,3;UBERON:0002523,1.19e-07,3;UBERON:0005983,1.19e-07,3;UBERON:0002165,1.19e-07,3;UBERON:0002062,1.19e-07,3;UBERON:0007280,1.19e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0.821246550437305,0.125542639594803,0.0764134057479513,0.164201178899891,0,0,0,0,0,0,0,0.0774672005803016,0,0.587200878669695,0,1.00272223735071,0.651032612147555,0.671746422719773,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0,0.224723484445085,0,0,0.639337125799041,0,0,0,0,0,0,0.502497330513487,0,0,0,0,0,0.211255286311942,0,0.419317291016752,0,0,0,0.285012743741249,0,0,1.75996244461323,1.09227722252426,0.889509253863555,0.426730222566507,0.800791974072025,0.574752439954483,0,0,3.41527781465669,1.76171156811282,1.91136614062614,0,0.560508562981536,0.790152254325231,1.180258620683,5.50215067848831,2.87842098599313,0,1.62961133316795,5.20792586308207,1.94826728407911,0.557052284425868,3.24066498222321,1.10766947291811,0,0.128091319725675,0.130059347559878,2.95988228286617,2.21080014228679,0.579606171470105,0.741432815810302,1.60524496853828,1.04535523804977,0.566546713487831,0.766440987203842,2.74901956386104,0.253019692019503,0.95569624297229,0.651083453856419,0.950452044448374,0.451725357233318,0.383959833463255,0,1.18388626022008,0,0.201606743224732,0.802320587350522,0.724122019413995,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0.087834785693126,0.130979075497713,0,0.370784442784429,0.324547393654683,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0.71153252537342,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.860509862246441,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0.10366105501537,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0.197030760201927,1.94064817373566,1.15508732651774,0,1.30139853857622,0.773288812777695,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0.413536052245775,3.01999881146064,0.640365346820666,0,0,0,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0,0.429680979473094,0.580066775656914,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0.324621940274555,0,0,0.313359791546046,7.51903431270201,0,0,0,1.27753871307098,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0.111308705022906,0,0.63337622438398,0.398495976502139,1.38141957765574,0,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0.568967241427498,0,0.709163045303809,0.344743373241465,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0,0,0.438770794307945,0.10893846351899,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0.141353071433941,0,0.995261931078505,0.265372693510018,1.22206028986725,0.296521128680622,0,0,0.067401132980677,1.60515529459758,0.234264445725339,0,0,0,0,1.20990716048664,0.30607276163049,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0.794305140223502,0,0,0,0.0633107959558787,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0.600420288709789,0.273810757783986,0,0.429765441419957,0,1.11712960508902,0.229160424011684,1.43574604915363,0,0,0,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,0,0.544813624446302,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0.0607495566580247,0.335434687599266,0,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0,0,0.213574825135389,0,0.414239055347196,0.496166021811951,0,0.365377795142688,0,0,0,0,0,0,0,0,0.500763722825999,0,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0.531459361253452,0.490696182767533,0,0.983091635014877,0,0,0.106691729694141,0,0,0,0,0,0,0.215649622793364,0.157265941855896,0.327628914576042,0,0,0,0,0,0,0,0,0,0.321146125482298,0,1.11743701340006,0.205116364240755,0.756215088665154,0,0.322951291263702,0,0.588886311006154,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0.620060389503552,0,0.546974809018219,0,0,0,0.255524855279191,0,0,0,0.455324382702595,0.177404740325278,0,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| ||
|short_description=p@chr11:94959186..94959199,- | |||
}} | }} |
Latest revision as of 03:43, 24 July 2015
Short description: | p@chr11:94959186..94959199, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:94959186..94959199, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 3.42e-22 | 6 |
acinar cell of salivary gland | 4.10e-16 | 3 |
lymphoid lineage restricted progenitor cell | 2.69e-14 | 52 |
lymphocyte | 5.62e-14 | 53 |
common lymphoid progenitor | 5.62e-14 | 53 |
regulatory T cell | 8.83e-12 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.83e-12 | 2 |
naive regulatory T cell | 8.83e-12 | 2 |
mature alpha-beta T cell | 4.86e-10 | 18 |
alpha-beta T cell | 4.86e-10 | 18 |
immature T cell | 4.86e-10 | 18 |
mature T cell | 4.86e-10 | 18 |
immature alpha-beta T cell | 4.86e-10 | 18 |
acinar cell | 7.17e-10 | 5 |
B cell | 3.30e-09 | 14 |
protein secreting cell | 2.67e-08 | 6 |
naive T cell | 3.95e-08 | 3 |
natural killer cell | 8.19e-08 | 3 |
pro-NK cell | 8.19e-08 | 3 |
T cell | 4.67e-07 | 25 |
pro-T cell | 4.67e-07 | 25 |
nongranular leukocyte | 6.42e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 4.72e-11 | 2 |
saliva-secreting gland | 2.67e-08 | 6 |
gland of oral region | 2.67e-08 | 6 |
gland of foregut | 2.67e-08 | 6 |
oral gland | 2.67e-08 | 6 |
oral cavity | 2.67e-08 | 6 |
valve | 1.19e-07 | 3 |
cardiac mesenchyme | 1.19e-07 | 3 |
cardial valve | 1.19e-07 | 3 |
tunica intima | 1.19e-07 | 3 |
heart layer | 1.19e-07 | 3 |
endocardium | 1.19e-07 | 3 |
endocardial cushion | 1.19e-07 | 3 |
presumptive endocardium | 1.19e-07 | 3 |