FFCP PHASE1:Hg19::chr12:104319130..104319137,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:104319130..104319137,+ | |||
|coexpression_cluster_id=C810 | |||
|description=CAGE_peak_at_chr12:104319130..104319137,+ | |||
|id=chr12:104319130..104319137,+ | |||
|ontology_enrichment_celltype=CL:0000945!3.96e-44!24;CL:0000826!3.96e-44!24;CL:0000542!2.74e-42!53;CL:0000051!2.74e-42!53;CL:0000838!1.58e-39!52;CL:0000236!5.66e-19!14;CL:0002087!1.98e-15!119;CL:0000738!1.52e-13!140;CL:0002031!3.40e-13!124;CL:0000988!2.21e-12!182;CL:0002032!1.23e-10!165;CL:0000837!1.23e-10!165;CL:0000785!5.42e-10!2;CL:0000955!5.42e-10!2;CL:0000818!5.42e-10!2;CL:0000954!5.42e-10!2;CL:0000816!5.42e-10!2;CL:0000037!5.65e-10!172;CL:0000566!5.65e-10!172;CL:0000080!1.48e-07!6;CL:0000817!6.36e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.55e-36;24!CL:0000542;1.35e-14;53!CL:0000946;7.03e-13;1!CL:0000786;7.03e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.71e-36,24;CL:0000826,4.71e-36,24;CL:0000838,8.73e-29,52;CL:0000542,3.26e-28,53;CL:0000051,3.26e-28,53;CL:0000946,7.03e-13,1;CL:0000786,7.03e-13,1;CL:0000980,7.03e-13,1;CL:0002087,5.33e-12,115;CL:0000988,6.31e-12,177;CL:0002031,1.97e-11,120;CL:0000738,6.76e-10,136;CL:0002032,4.24e-08,161;CL:0000837,4.24e-08,161;CL:0000037,1.08e-07,168;CL:0000785,4.56e-07,2;CL:0000955,4.56e-07,2;CL:0000818,4.56e-07,2;CL:0000954,4.56e-07,2;CL:0000816,4.56e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;1.35e-14;53!CL:0000954;4.56e-07;2 | |||
|ontology_enrichment_disease=DOID:0060058!6.39e-27!10;DOID:2531!4.00e-08!51;DOID:0060083!4.00e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;9.84e-18;10!DOID:630;1.11e-12;1!DOID:0050177;1.11e-12;1!DOID:0050427;1.11e-12;1!DOID:0060060;1.66e-12;1!DOID:0060061;1.66e-12;1!DOID:8691;1.66e-12;1!DOID:2355;3.26e-12;1!DOID:74;9.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.28e-17,10;DOID:630,9.92e-13,1;DOID:0050177,9.92e-13,1;DOID:0050427,9.92e-13,1;DOID:0060060,1.57e-12,1;DOID:0060061,1.57e-12,1;DOID:8691,1.57e-12,1;DOID:2355,3.45e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!5.73e-21!7;UBERON:0002106!9.07e-14!3;UBERON:0004854!9.07e-14!3;UBERON:0009034!9.07e-14!3;UBERON:0002095!9.07e-14!3;UBERON:0004782!9.07e-14!3;UBERON:0003281!9.07e-14!3;UBERON:0009664!9.07e-14!3;UBERON:0002296!9.07e-14!3;UBERON:0005602!9.07e-14!3;UBERON:0001179!9.07e-14!3;UBERON:0006293!9.07e-14!3;UBERON:0002370!1.53e-09!4;UBERON:0005058!1.53e-09!4;UBERON:0009113!1.53e-09!4;UBERON:0003295!1.53e-09!4;UBERON:0005562!1.53e-09!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;1.66e-12;1!UBERON:0002331;1.00e-10;10!UBERON:0000178;2.56e-07;15!UBERON:0000179;2.56e-07;15!UBERON:0000463;2.56e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.75e-12,1;UBERON:0002331,9.87e-11,10;UBERON:0000358,9.87e-11,10;UBERON:0000307,9.87e-11,10;UBERON:0000091,9.87e-11,10;UBERON:0000087,9.87e-11,10;UBERON:0007010,9.87e-11,10;UBERON:0007806,9.87e-11,10;UBERON:0008780,9.87e-11,10;UBERON:0005728,9.87e-11,10;UBERON:0000178,2.54e-07,15;UBERON:0000179,2.54e-07,15;UBERON:0000463,2.54e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60468152070698,1.55991119954897,1.57421562627358,0,0,0,0,0,0,0,1.13735385989937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0.661044872784862,0,0.569212969109448,1.17447437874188,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00299045849731,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,7.50817313312524,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96521128680622,3.70691816839509,3.65476823269094,0,0,0,0.364909578431332,0,0,0,0,0,0.379119477770928,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10309883423452,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27009998098677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48083010905975,5.73073732504038,0.974340787047167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0.245772908753719,0,2.59983614611409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.52731507912766,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,1.4097587696978,0.386747327841463,0.499705779624645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.404112318087525,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,3.8468219076388 | |||
|short_description=p@chr12:104319130..104319137,+ | |||
}} |
Latest revision as of 04:14, 24 July 2015
Short description: | p@chr12:104319130..104319137, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:104319130..104319137, + |
Coexpression cluster: | C810_b_cord_xeroderma_adult_plasma_splenic_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.71e-36 | 24 |
pro-B cell | 4.71e-36 | 24 |
lymphoid lineage restricted progenitor cell | 8.73e-29 | 52 |
lymphocyte | 3.26e-28 | 53 |
common lymphoid progenitor | 3.26e-28 | 53 |
antibody secreting cell | 7.03e-13 | 1 |
plasma cell | 7.03e-13 | 1 |
plasmablast | 7.03e-13 | 1 |
nongranular leukocyte | 5.33e-12 | 115 |
hematopoietic cell | 6.31e-12 | 177 |
hematopoietic lineage restricted progenitor cell | 1.97e-11 | 120 |
leukocyte | 6.76e-10 | 136 |
hematopoietic oligopotent progenitor cell | 4.24e-08 | 161 |
hematopoietic multipotent progenitor cell | 4.24e-08 | 161 |
hematopoietic stem cell | 1.08e-07 | 168 |
mature B cell | 4.56e-07 | 2 |
pre-B-II cell | 4.56e-07 | 2 |
transitional stage B cell | 4.56e-07 | 2 |
small pre-B-II cell | 4.56e-07 | 2 |
immature B cell | 4.56e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.75e-12 | 1 |
umbilical cord | 9.87e-11 | 10 |
blastocyst | 9.87e-11 | 10 |
blastula | 9.87e-11 | 10 |
bilaminar disc | 9.87e-11 | 10 |
inner cell mass | 9.87e-11 | 10 |
cleaving embryo | 9.87e-11 | 10 |
connecting stalk | 9.87e-11 | 10 |
inner cell mass derived epiblast | 9.87e-11 | 10 |
extraembryonic mesoderm | 9.87e-11 | 10 |
blood | 2.54e-07 | 15 |
haemolymphatic fluid | 2.54e-07 | 15 |
organism substance | 2.54e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.28e-17 | 10 |
genetic disease | 9.92e-13 | 1 |
monogenic disease | 9.92e-13 | 1 |
xeroderma pigmentosum | 9.92e-13 | 1 |
non-Hodgkin lymphoma | 1.57e-12 | 1 |
cutaneous T cell lymphoma | 1.57e-12 | 1 |
mycosis fungoides | 1.57e-12 | 1 |
anemia | 3.45e-12 | 1 |