FFCP PHASE1:Hg19::chr12:13025332..13025347,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:13025332..13025347,+ | |||
|description=CAGE_peak_at_chr12:13025332..13025347,+ | |description=CAGE_peak_at_chr12:13025332..13025347,+ | ||
|id=chr12:13025332..13025347,+ | |id=chr12:13025332..13025347,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.00e-30!254;CL:0000222!2.93e-18!119;CL:0000548!1.46e-16!679;CL:0000004!1.46e-16!679;CL:0000255!1.46e-16!679;CL:0000220!2.76e-16!246;CL:0000012!3.89e-16!682;CL:0002321!7.36e-16!248;CL:0000076!4.34e-13!62;CL:0000077!2.38e-11!19;CL:0000192!2.68e-11!42;CL:0000514!2.68e-11!42;CL:1000497!6.94e-11!18;CL:0002518!6.94e-11!18;CL:0000003!7.13e-11!722;CL:0000183!1.21e-09!59;CL:1000449!1.27e-09!16;CL:1000507!1.18e-08!12;CL:1000494!1.18e-08!12;CL:0000213!1.54e-08!57;CL:0000215!1.54e-08!57;CL:0000680!1.63e-08!57;CL:0000056!1.63e-08!57;CL:0000355!1.63e-08!57;CL:0000187!3.99e-08!54;CL:0002681!1.40e-07!13;CL:0002584!1.40e-07!13;CL:0000393!8.66e-07!60;CL:0000211!8.66e-07!60 | |ontology_enrichment_celltype=CL:0000066!1.00e-30!254;CL:0000222!2.93e-18!119;CL:0000548!1.46e-16!679;CL:0000004!1.46e-16!679;CL:0000255!1.46e-16!679;CL:0000220!2.76e-16!246;CL:0000012!3.89e-16!682;CL:0002321!7.36e-16!248;CL:0000076!4.34e-13!62;CL:0000077!2.38e-11!19;CL:0000192!2.68e-11!42;CL:0000514!2.68e-11!42;CL:1000497!6.94e-11!18;CL:0002518!6.94e-11!18;CL:0000003!7.13e-11!722;CL:0000183!1.21e-09!59;CL:1000449!1.27e-09!16;CL:1000507!1.18e-08!12;CL:1000494!1.18e-08!12;CL:0000213!1.54e-08!57;CL:0000215!1.54e-08!57;CL:0000680!1.63e-08!57;CL:0000056!1.63e-08!57;CL:0000355!1.63e-08!57;CL:0000187!3.99e-08!54;CL:0002681!1.40e-07!13;CL:0002584!1.40e-07!13;CL:0000393!8.66e-07!60;CL:0000211!8.66e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000077;2.70e-16;19!CL:1000497;1.96e-15;17!CL:0002518;1.96e-15;17!CL:1000449;1.15e-14;15!CL:0002681;8.00e-13;12!CL:0002584;8.00e-13;12!CL:1000507;2.59e-12;10!CL:1000494;2.59e-12;10!CL:0000239;2.22e-07;3!CL:1000615;2.22e-07;3!CL:0002306;2.22e-07;3!CL:0002586;2.22e-07;3!CL:1000746;2.47e-07;7!CL:1000612;2.47e-07;7 | |ontology_enrichment_celltype_v019=CL:0000077;2.70e-16;19!CL:1000497;1.96e-15;17!CL:0002518;1.96e-15;17!CL:1000449;1.15e-14;15!CL:0002681;8.00e-13;12!CL:0002584;8.00e-13;12!CL:1000507;2.59e-12;10!CL:1000494;2.59e-12;10!CL:0000239;2.22e-07;3!CL:1000615;2.22e-07;3!CL:0002306;2.22e-07;3!CL:0002586;2.22e-07;3!CL:1000746;2.47e-07;7!CL:1000612;2.47e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000077,5.57e-17,19;CL:1000497,5.72e-16,17;CL:0002518,5.72e-16,17;CL:1000449,3.22e-15,15;CL:0000066,4.65e-15,253;CL:0002681,3.61e-13,12;CL:0002584,3.61e-13,12;CL:1000507,8.81e-13,10;CL:1000494,8.81e-13,10;CL:0000222,3.13e-11,121;CL:0000213,1.35e-08,58;CL:0000215,1.35e-08,58;CL:0002586,1.42e-07,3;CL:1000746,1.53e-07,7;CL:1000612,1.53e-07,7;CL:0000076,1.61e-07,63;CL:0000239,2.18e-07,3;CL:1000615,2.18e-07,3;CL:0002306,2.18e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!2.59e-12!106;DOID:0050687!6.12e-09!143 | |ontology_enrichment_disease=DOID:305!2.59e-12!106;DOID:0050687!6.12e-09!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!2.01e-11!138;UBERON:0003064!2.13e-11!37;UBERON:0003104!3.02e-10!238;UBERON:0009142!3.02e-10!238;UBERON:0005256!7.42e-10!143;UBERON:0006554!1.06e-09!44;UBERON:0004211!1.27e-09!16;UBERON:0001285!1.27e-09!16;UBERON:0007684!1.27e-09!16;UBERON:0003220!1.27e-09!16;UBERON:0004208!1.27e-09!16;UBERON:0000119!2.53e-09!312;UBERON:0001008!2.91e-09!45;UBERON:0000481!6.25e-09!347;UBERON:0003914!8.97e-09!118;UBERON:0006555!9.56e-09!17;UBERON:0005103!9.56e-09!17;UBERON:0000083!9.56e-09!17;UBERON:0009201!9.56e-09!17;UBERON:0004819!9.56e-09!17;UBERON:0006553!9.56e-09!17;UBERON:0003074!9.56e-09!17;UBERON:0003060!9.56e-09!17;UBERON:0009773!1.18e-08!12;UBERON:0001231!1.18e-08!12;UBERON:0004810!1.18e-08!12;UBERON:0002100!1.83e-08!216;UBERON:0007625!1.90e-08!11;UBERON:0000483!2.28e-08!309;UBERON:0000058!3.10e-08!26;UBERON:0000080!5.64e-08!18;UBERON:0002120!5.64e-08!18;UBERON:0004875!5.64e-08!18;UBERON:0005721!5.64e-08!18;UBERON:0005754!5.64e-08!18;UBERON:0007297!5.64e-08!18;UBERON:0001851!8.96e-08!16;UBERON:0002049!1.02e-07!79;UBERON:0007798!1.02e-07!79;UBERON:0001225!1.40e-07!13;UBERON:0008987!1.40e-07!13;UBERON:0002367!2.39e-07!11;UBERON:0010147!2.39e-07!11;UBERON:0009846!2.39e-07!11;UBERON:0003353!2.39e-07!11;UBERON:0004902!2.39e-07!11;UBERON:0003820!2.39e-07!11;UBERON:0009847!2.39e-07!11;UBERON:0001134!2.89e-07!61;UBERON:0002036!2.89e-07!61;UBERON:0003082!2.89e-07!61 | |ontology_enrichment_uberon=UBERON:0000490!2.01e-11!138;UBERON:0003064!2.13e-11!37;UBERON:0003104!3.02e-10!238;UBERON:0009142!3.02e-10!238;UBERON:0005256!7.42e-10!143;UBERON:0006554!1.06e-09!44;UBERON:0004211!1.27e-09!16;UBERON:0001285!1.27e-09!16;UBERON:0007684!1.27e-09!16;UBERON:0003220!1.27e-09!16;UBERON:0004208!1.27e-09!16;UBERON:0000119!2.53e-09!312;UBERON:0001008!2.91e-09!45;UBERON:0000481!6.25e-09!347;UBERON:0003914!8.97e-09!118;UBERON:0006555!9.56e-09!17;UBERON:0005103!9.56e-09!17;UBERON:0000083!9.56e-09!17;UBERON:0009201!9.56e-09!17;UBERON:0004819!9.56e-09!17;UBERON:0006553!9.56e-09!17;UBERON:0003074!9.56e-09!17;UBERON:0003060!9.56e-09!17;UBERON:0009773!1.18e-08!12;UBERON:0001231!1.18e-08!12;UBERON:0004810!1.18e-08!12;UBERON:0002100!1.83e-08!216;UBERON:0007625!1.90e-08!11;UBERON:0000483!2.28e-08!309;UBERON:0000058!3.10e-08!26;UBERON:0000080!5.64e-08!18;UBERON:0002120!5.64e-08!18;UBERON:0004875!5.64e-08!18;UBERON:0005721!5.64e-08!18;UBERON:0005754!5.64e-08!18;UBERON:0007297!5.64e-08!18;UBERON:0001851!8.96e-08!16;UBERON:0002049!1.02e-07!79;UBERON:0007798!1.02e-07!79;UBERON:0001225!1.40e-07!13;UBERON:0008987!1.40e-07!13;UBERON:0002367!2.39e-07!11;UBERON:0010147!2.39e-07!11;UBERON:0009846!2.39e-07!11;UBERON:0003353!2.39e-07!11;UBERON:0004902!2.39e-07!11;UBERON:0003820!2.39e-07!11;UBERON:0009847!2.39e-07!11;UBERON:0001134!2.89e-07!61;UBERON:0002036!2.89e-07!61;UBERON:0003082!2.89e-07!61 | ||
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| ||
|short_description=p@chr12:13025332..13025347,+ | |short_description=p@chr12:13025332..13025347,+ | ||
}} | }} |
Latest revision as of 06:42, 24 July 2015
Short description: | p@chr12:13025332..13025347, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:13025332..13025347, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 5.57e-17 | 19 |
kidney cell | 5.72e-16 | 17 |
kidney epithelial cell | 5.72e-16 | 17 |
epithelial cell of nephron | 3.22e-15 | 15 |
epithelial cell | 4.65e-15 | 253 |
kidney cortical cell | 3.61e-13 | 12 |
renal cortical epithelial cell | 3.61e-13 | 12 |
kidney tubule cell | 8.81e-13 | 10 |
nephron tubule epithelial cell | 8.81e-13 | 10 |
mesodermal cell | 3.13e-11 | 121 |
lining cell | 1.35e-08 | 58 |
barrier cell | 1.35e-08 | 58 |
retinal pigment epithelial cell | 1.42e-07 | 3 |
glomerular cell | 1.53e-07 | 7 |
kidney corpuscule cell | 1.53e-07 | 7 |
squamous epithelial cell | 1.61e-07 | 63 |
brush border epithelial cell | 2.18e-07 | 3 |
kidney cortex tubule cell | 2.18e-07 | 3 |
epithelial cell of proximal tubule | 2.18e-07 | 3 |