FFCP PHASE1:Hg19::chr12:13025332..13025347,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:13025332..13025347,+ | |||
|description=CAGE_peak_at_chr12:13025332..13025347,+ | |description=CAGE_peak_at_chr12:13025332..13025347,+ | ||
|id=chr12:13025332..13025347,+ | |id=chr12:13025332..13025347,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.00e-30!254;CL:0000222!2.93e-18!119;CL:0000548!1.46e-16!679;CL:0000004!1.46e-16!679;CL:0000255!1.46e-16!679;CL:0000220!2.76e-16!246;CL:0000012!3.89e-16!682;CL:0002321!7.36e-16!248;CL:0000076!4.34e-13!62;CL:0000077!2.38e-11!19;CL:0000192!2.68e-11!42;CL:0000514!2.68e-11!42;CL:1000497!6.94e-11!18;CL:0002518!6.94e-11!18;CL:0000003!7.13e-11!722;CL:0000183!1.21e-09!59;CL:1000449!1.27e-09!16;CL:1000507!1.18e-08!12;CL:1000494!1.18e-08!12;CL:0000213!1.54e-08!57;CL:0000215!1.54e-08!57;CL:0000680!1.63e-08!57;CL:0000056!1.63e-08!57;CL:0000355!1.63e-08!57;CL:0000187!3.99e-08!54;CL:0002681!1.40e-07!13;CL:0002584!1.40e-07!13;CL:0000393!8.66e-07!60;CL:0000211!8.66e-07!60 | |ontology_enrichment_celltype=CL:0000066!1.00e-30!254;CL:0000222!2.93e-18!119;CL:0000548!1.46e-16!679;CL:0000004!1.46e-16!679;CL:0000255!1.46e-16!679;CL:0000220!2.76e-16!246;CL:0000012!3.89e-16!682;CL:0002321!7.36e-16!248;CL:0000076!4.34e-13!62;CL:0000077!2.38e-11!19;CL:0000192!2.68e-11!42;CL:0000514!2.68e-11!42;CL:1000497!6.94e-11!18;CL:0002518!6.94e-11!18;CL:0000003!7.13e-11!722;CL:0000183!1.21e-09!59;CL:1000449!1.27e-09!16;CL:1000507!1.18e-08!12;CL:1000494!1.18e-08!12;CL:0000213!1.54e-08!57;CL:0000215!1.54e-08!57;CL:0000680!1.63e-08!57;CL:0000056!1.63e-08!57;CL:0000355!1.63e-08!57;CL:0000187!3.99e-08!54;CL:0002681!1.40e-07!13;CL:0002584!1.40e-07!13;CL:0000393!8.66e-07!60;CL:0000211!8.66e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000077;2.70e-16;19!CL:1000497;1.96e-15;17!CL:0002518;1.96e-15;17!CL:1000449;1.15e-14;15!CL:0002681;8.00e-13;12!CL:0002584;8.00e-13;12!CL:1000507;2.59e-12;10!CL:1000494;2.59e-12;10!CL:0000239;2.22e-07;3!CL:1000615;2.22e-07;3!CL:0002306;2.22e-07;3!CL:0002586;2.22e-07;3!CL:1000746;2.47e-07;7!CL:1000612;2.47e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,5.57e-17,19;CL:1000497,5.72e-16,17;CL:0002518,5.72e-16,17;CL:1000449,3.22e-15,15;CL:0000066,4.65e-15,253;CL:0002681,3.61e-13,12;CL:0002584,3.61e-13,12;CL:1000507,8.81e-13,10;CL:1000494,8.81e-13,10;CL:0000222,3.13e-11,121;CL:0000213,1.35e-08,58;CL:0000215,1.35e-08,58;CL:0002586,1.42e-07,3;CL:1000746,1.53e-07,7;CL:1000612,1.53e-07,7;CL:0000076,1.61e-07,63;CL:0000239,2.18e-07,3;CL:1000615,2.18e-07,3;CL:0002306,2.18e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.59e-12!106;DOID:0050687!6.12e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!2.01e-11!138;UBERON:0003064!2.13e-11!37;UBERON:0003104!3.02e-10!238;UBERON:0009142!3.02e-10!238;UBERON:0005256!7.42e-10!143;UBERON:0006554!1.06e-09!44;UBERON:0004211!1.27e-09!16;UBERON:0001285!1.27e-09!16;UBERON:0007684!1.27e-09!16;UBERON:0003220!1.27e-09!16;UBERON:0004208!1.27e-09!16;UBERON:0000119!2.53e-09!312;UBERON:0001008!2.91e-09!45;UBERON:0000481!6.25e-09!347;UBERON:0003914!8.97e-09!118;UBERON:0006555!9.56e-09!17;UBERON:0005103!9.56e-09!17;UBERON:0000083!9.56e-09!17;UBERON:0009201!9.56e-09!17;UBERON:0004819!9.56e-09!17;UBERON:0006553!9.56e-09!17;UBERON:0003074!9.56e-09!17;UBERON:0003060!9.56e-09!17;UBERON:0009773!1.18e-08!12;UBERON:0001231!1.18e-08!12;UBERON:0004810!1.18e-08!12;UBERON:0002100!1.83e-08!216;UBERON:0007625!1.90e-08!11;UBERON:0000483!2.28e-08!309;UBERON:0000058!3.10e-08!26;UBERON:0000080!5.64e-08!18;UBERON:0002120!5.64e-08!18;UBERON:0004875!5.64e-08!18;UBERON:0005721!5.64e-08!18;UBERON:0005754!5.64e-08!18;UBERON:0007297!5.64e-08!18;UBERON:0001851!8.96e-08!16;UBERON:0002049!1.02e-07!79;UBERON:0007798!1.02e-07!79;UBERON:0001225!1.40e-07!13;UBERON:0008987!1.40e-07!13;UBERON:0002367!2.39e-07!11;UBERON:0010147!2.39e-07!11;UBERON:0009846!2.39e-07!11;UBERON:0003353!2.39e-07!11;UBERON:0004902!2.39e-07!11;UBERON:0003820!2.39e-07!11;UBERON:0009847!2.39e-07!11;UBERON:0001134!2.89e-07!61;UBERON:0002036!2.89e-07!61;UBERON:0003082!2.89e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.15e-14;15!UBERON:0004819;1.15e-14;15!UBERON:0001285;1.15e-14;15!UBERON:0007684;1.15e-14;15!UBERON:0001225;8.00e-13;12!UBERON:0008987;8.00e-13;12!UBERON:0001851;1.97e-12;15!UBERON:0004211;2.59e-12;10!UBERON:0009773;2.59e-12;10!UBERON:0001231;2.59e-12;10!UBERON:0004810;2.59e-12;10!UBERON:0002113;4.53e-10;24!UBERON:0011143;4.53e-10;24!UBERON:0000353;7.11e-10;15!UBERON:0007625;3.47e-09;11!UBERON:0000489;7.48e-08;29!UBERON:0006554;1.68e-07;30!UBERON:0001008;1.68e-07;30!UBERON:0001781;2.22e-07;3!UBERON:0006853;2.22e-07;3!UBERON:0007685;2.22e-07;3!UBERON:0004134;2.22e-07;3!UBERON:0001782;2.22e-07;3!UBERON:0000074;2.47e-07;7!UBERON:0001229;2.47e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,3.22e-15,15;UBERON:0009773,3.22e-15,15;UBERON:0001231,3.22e-15,15;UBERON:0001285,3.22e-15,15;UBERON:0007684,3.22e-15,15;UBERON:0004208,3.22e-15,15;UBERON:0006555,4.25e-14,16;UBERON:0004819,4.25e-14,16;UBERON:0001225,3.61e-13,12;UBERON:0008987,3.61e-13,12;UBERON:0004810,8.81e-13,10;UBERON:0001851,1.01e-12,15;UBERON:0000353,3.84e-10,15;UBERON:0002113,2.11e-09,26;UBERON:0003918,2.11e-09,26;UBERON:0011143,2.11e-09,26;UBERON:0005095,2.11e-09,26;UBERON:0007687,2.11e-09,26;UBERON:0007625,2.51e-09,11;UBERON:0006554,7.28e-09,47;UBERON:0001008,1.36e-08,48;UBERON:0001782,1.42e-07,3;UBERON:0005424,1.42e-07,3;UBERON:0010532,1.53e-07,7;UBERON:0000074,1.53e-07,7;UBERON:0001229,1.53e-07,7;UBERON:0001230,1.53e-07,7;UBERON:0003220,1.53e-07,7;UBERON:0005749,1.53e-07,7;UBERON:0004199,1.53e-07,7;UBERON:0004209,1.53e-07,7;UBERON:0004198,1.53e-07,7;UBERON:0000489,1.97e-07,31;UBERON:0006853,2.18e-07,3;UBERON:0007685,2.18e-07,3;UBERON:0004134,2.18e-07,3;UBERON:0003064,6.71e-07,28 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.96587149201207,0.697801167972428,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0,0.492484232307152,1.02000345622126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0.144846518960824,0,0,0.378139268656271,1.33037638477538,0.527008714158756,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.838998872419812,0.275118041940067,0.835979866147242,1.29208379584664,0,0,0,0.760272105718513,0,0.367663080345869,0,0.17859945656816,0.44905874525234,0.225222960966644,1.53316637465883,2.84779697870439,0.366403487860815,0,0,0,0,0.25326102332916,0.264818361626438,0,0,0,0,1.2333377420858,0,0.134710672069688,0,0.302714855289863,0,0.234321431833797,0,0.570471821544449,0,0,0,0,1.02077085627447,0.737005903870608,0,0,0,1.82032272387605,2.15585442544872,0,0,1.10825646193673,0,0,0,0.567160915800105,0.717558542755448,0,0.211931901159562,0.300091096084402,0.618315175430633,1.03056216018252,0,0.168776332241266,0,0,0.184099797284599,0,0,0.403008392910561,1.18692414617341,0.57978255948989,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.505754070234305,0.241011029883482,0.661763836394364,0.435758888184812,0.71181185733329,0.539325232640658,0.98110732562673,0.769494313892781,0,0,0.4115740113314,0,0,0,0,0,0,4.11762744716461,0.109750285408626,2.24803506515239,0.301586917234893,0.0925884451585296,0,0,2.88662684050547,0.115930404975077,0.352226082707465,0,0,0,0,0.858486162094873,0,0,0,0,0.335964256397719,0,0.268675568108545,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,3.7003257833969,0.87192013766656,2.42016343209135,1.03417372606222,0,0,0,0,0.771622122786426,0,0.532844358032199,0.285955987316295,0,1.64648067356154,0,0,0,1.80863626235752,2.61460037580088,1.49959486773086,0,0,0,0.718874566474748,0,0,0.289562613335158,1.2328579353023,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.813795071099207,0.623912584592421,0.713715955188647,0.473107245101804,0.234282829985426,0.601892199455438,0,0,0.664225598535437,0,0.781952530212746,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0.321707842287215,0,0.154209693802656,0.177561725313127,0.164254312027618,1.03850885836724,0.232420756919918,0.483437798366489,1.80455823272956,0.184161977871793,2.06666006696292,1.0925470080403,0.917870904715969,0.451199612907412,1.77135275340154,0.784349769176855,1.46139224653261,1.89992932007176,1.13733384070897,2.72149928442425,1.94324324491925,0,2.70946437543853,1.50506932156456,4.84264918785573,2.49322802678617,1.34324852833307,0,0,1.53870075069834,4.92021968549559,2.92840555197873,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0,0,0.384380134730212,0.255225424989168,0,0.464845549297286,1.25924938732256,0,0,0,0.869932992075073,0.18532421910392,0.715624433709956,0,1.2655176988749,0.953150969619124,1.02359116524534,0,0,0.78494864019923,0.359744915166629,1.09814811894422,0.706874414074119,1.01091240786658,0,0,0.975267478179181,0.487426979262569,1.05650146756755,1.09199929126389,0.707027159768564,0,1.10273068709225,0.66343897524122,0.438450885253763,1.15755106853338,0.655894752046633,1.82619339266434,0.6196469961995,0.845086807596724,0.860468113224309,0.589494246078727,0.35667105148125,1.41904425628239,0.633322905892992,0,0.379473173765715,0,0.673554789078584,0.670302275535787,0,0.0941438007767792,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.556543525114529,0,0.422250816255987,0,0,0,1.32949287252801,0,0,4.49341755736634,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0.139423744278603,0,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.843992258112108,0.489698424477443,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,2.18502341580683,0,0,0,0,0,0,0.664653872707185,0.992975867626496,0.941798755221676,0,0,1.24807205711825,0.347119476670262,0.195984794828755,0.0870592065804026,0,0,1.83837029449262,2.63121541510268,1.14961639874493,0,0,0,3.83717389010903,0.596143835108969,0,0,0.0801588202515337,0,0,0.144090417154106,0,0,24.9214800519499,0,0.235694034616795,0.407712618220842,0.836822770498666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,8.02562557547489,3.04788476865836,0.383830394638891,0,0,0,1.08599920350743,2.5926644736038,0.326587360109409,3.59190574687462,0,0,0.226624183040251,0,0,0,0,1.53978154095896,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88212655758537,0,0,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0.147855149989634,0.477890301491107,0,0.931577741257556,0,0,1.04349012362347,0,1.90402606084398,1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| ||
|short_description=p@chr12:13025332..13025347,+ | |short_description=p@chr12:13025332..13025347,+ | ||
}} | }} |
Latest revision as of 06:42, 24 July 2015
Short description: | p@chr12:13025332..13025347, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:13025332..13025347, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 5.57e-17 | 19 |
kidney cell | 5.72e-16 | 17 |
kidney epithelial cell | 5.72e-16 | 17 |
epithelial cell of nephron | 3.22e-15 | 15 |
epithelial cell | 4.65e-15 | 253 |
kidney cortical cell | 3.61e-13 | 12 |
renal cortical epithelial cell | 3.61e-13 | 12 |
kidney tubule cell | 8.81e-13 | 10 |
nephron tubule epithelial cell | 8.81e-13 | 10 |
mesodermal cell | 3.13e-11 | 121 |
lining cell | 1.35e-08 | 58 |
barrier cell | 1.35e-08 | 58 |
retinal pigment epithelial cell | 1.42e-07 | 3 |
glomerular cell | 1.53e-07 | 7 |
kidney corpuscule cell | 1.53e-07 | 7 |
squamous epithelial cell | 1.61e-07 | 63 |
brush border epithelial cell | 2.18e-07 | 3 |
kidney cortex tubule cell | 2.18e-07 | 3 |
epithelial cell of proximal tubule | 2.18e-07 | 3 |