FFCP PHASE1:Hg19::chr12:133373121..133373125,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:133373121..133373125,- | |||
|description=CAGE_peak_at_chr12:133373121..133373125,- | |||
|id=chr12:133373121..133373125,- | |||
|ontology_enrichment_celltype=CL:0000359!4.23e-16!32;CL:0000192!5.34e-15!42;CL:0000514!5.34e-15!42;CL:0000183!8.05e-15!59;CL:0000055!1.64e-14!180;CL:0000187!7.27e-14!54;CL:0000680!4.46e-13!57;CL:0000056!4.46e-13!57;CL:0000355!4.46e-13!57;CL:0000222!6.37e-12!119;CL:0000393!1.94e-11!60;CL:0000211!1.94e-11!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.18e-24;32!CL:0000192;3.53e-16;43!CL:0000346;1.11e-14;3!CL:1000428;1.11e-14;3!CL:0002596;1.04e-10;2!CL:0002595;2.53e-09;5!CL:0002559;5.31e-09;5!CL:0002539;9.48e-08;10!CL:0000393;1.93e-07;61!CL:0000211;1.93e-07;61!CL:0000187;6.77e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.01e-26,32;CL:0000192,1.43e-18,43;CL:0000514,1.43e-18,43;CL:0000346,4.32e-15,3;CL:1000428,4.32e-15,3;CL:0000187,7.52e-14,55;CL:0000680,5.62e-13,58;CL:0000056,5.62e-13,58;CL:0000355,5.62e-13,58;CL:0000393,3.44e-12,61;CL:0000211,3.44e-12,61;CL:0000222,4.38e-11,121;CL:0002596,6.56e-11,2;CL:0002595,2.80e-09,5;CL:0002559,3.05e-09,5;CL:0002539,8.23e-08,10;CL:0002321,1.11e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;3.53e-16;43!CL:0000355;7.84e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.80e-20!79;UBERON:0007798!5.80e-20!79;UBERON:0001981!1.65e-19!60;UBERON:0007500!1.65e-19!60;UBERON:0004537!1.65e-19!60;UBERON:0006965!1.65e-19!60;UBERON:0000055!5.54e-19!69;UBERON:0001637!1.97e-18!42;UBERON:0003509!1.97e-18!42;UBERON:0004572!1.97e-18!42;UBERON:0004872!4.40e-18!84;UBERON:0001009!1.99e-16!113;UBERON:0004535!1.28e-15!110;UBERON:0004290!3.71e-15!70;UBERON:0000914!1.72e-14!83;UBERON:0002329!1.72e-14!83;UBERON:0003077!1.72e-14!83;UBERON:0003059!1.72e-14!83;UBERON:0007282!1.72e-14!83;UBERON:0009618!1.72e-14!83;UBERON:0007285!1.72e-14!83;UBERON:0004573!2.78e-13!33;UBERON:0004571!2.78e-13!33;UBERON:0003914!6.17e-13!118;UBERON:0001134!7.73e-13!61;UBERON:0002036!7.73e-13!61;UBERON:0003082!7.73e-13!61;UBERON:0002385!1.82e-12!63;UBERON:0001015!1.82e-12!63;UBERON:0000383!1.82e-12!63;UBERON:0000486!4.18e-12!82;UBERON:0000490!1.53e-09!138;UBERON:0000025!3.47e-09!194;UBERON:0000119!3.93e-09!312;UBERON:0000483!5.63e-09!309;UBERON:0004111!1.05e-08!241;UBERON:0005256!2.08e-08!143;UBERON:0000477!6.55e-08!286;UBERON:0000947!5.47e-07!21;UBERON:0010191!5.47e-07!21;UBERON:0002100!6.39e-07!216;UBERON:0000481!8.93e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.44e-20;33!UBERON:0004571;2.44e-20;33!UBERON:0001637;1.75e-17;42!UBERON:0003509;1.75e-17;42!UBERON:0004572;1.75e-17;42!UBERON:0000412;1.11e-14;3!UBERON:0001992;1.11e-14;3!UBERON:0007500;2.46e-13;56!UBERON:0001981;2.46e-13;56!UBERON:0004537;2.46e-13;56!UBERON:0005396;1.04e-10;2!UBERON:0000055;2.44e-09;65!UBERON:0003834;2.53e-09;5!UBERON:0001533;2.53e-09;5!UBERON:0002073;5.31e-09;5!UBERON:0002049;2.55e-08;75!UBERON:0007798;2.55e-08;75!UBERON:0004237;9.48e-08;10!UBERON:0004695;9.48e-08;10!UBERON:0002111;9.48e-08;10!UBERON:0004178;9.48e-08;10!UBERON:0000947;1.46e-07;21!UBERON:0010191;1.46e-07;21!UBERON:0003914;1.48e-07;74!UBERON:0000119;8.44e-07;139!UBERON:0003513;9.00e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.13e-25,42;UBERON:0003509,3.13e-25,42;UBERON:0004572,3.13e-25,42;UBERON:0007500,5.00e-22,59;UBERON:0001981,5.00e-22,59;UBERON:0004537,5.00e-22,59;UBERON:0006965,5.00e-22,59;UBERON:0004573,1.31e-21,33;UBERON:0004571,1.31e-21,33;UBERON:0004872,1.75e-20,83;UBERON:0007503,1.47e-19,78;UBERON:0000055,1.47e-18,68;UBERON:0002329,1.91e-17,71;UBERON:0003059,1.91e-17,71;UBERON:0007282,1.91e-17,71;UBERON:0004290,1.91e-17,71;UBERON:0009618,1.91e-17,71;UBERON:0003077,3.82e-17,72;UBERON:0007285,3.82e-17,72;UBERON:0007524,7.46e-17,73;UBERON:0002049,1.20e-15,78;UBERON:0007798,1.20e-15,78;UBERON:0000412,4.32e-15,3;UBERON:0001992,4.32e-15,3;UBERON:0003914,1.52e-14,117;UBERON:0000486,2.50e-14,83;UBERON:0001134,8.52e-14,62;UBERON:0002036,8.52e-14,62;UBERON:0003082,8.52e-14,62;UBERON:0002385,2.91e-13,64;UBERON:0001015,2.91e-13,64;UBERON:0000383,2.91e-13,64;UBERON:0004535,7.63e-13,109;UBERON:0001009,2.23e-12,112;UBERON:0000490,1.14e-11,148;UBERON:0005396,6.56e-11,2;UBERON:0005256,7.28e-11,122;UBERON:0003834,2.80e-09,5;UBERON:0001533,2.80e-09,5;UBERON:0002073,3.05e-09,5;UBERON:0005086,3.05e-09,5;UBERON:0003081,8.14e-09,203;UBERON:0004237,8.23e-08,10;UBERON:0004695,8.23e-08,10;UBERON:0002111,8.23e-08,10;UBERON:0004178,8.23e-08,10;UBERON:0000025,9.22e-08,192;UBERON:0000926,1.33e-07,315;UBERON:0004120,1.33e-07,315;UBERON:0006603,1.33e-07,315;UBERON:0000947,1.46e-07,21;UBERON:0010191,1.46e-07,21;UBERON:0002100,2.57e-07,199;UBERON:0003104,2.96e-07,160;UBERON:0009142,2.96e-07,160;UBERON:0003513,9.67e-07,7 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0.631719873426831,0,0,2.09340350391728,0,0,0.37129905888014,0,1.34465029290355,0.602694528023977,0.730310090387373,0,0.123121058076788,0.612002073732759,0.626909442956176,0,0,0.376627918784408,0.229240217243854,0,0,0,0.383829398097213,0,1.83884244895785,0,0.739508020333575,0.232401601740905,0,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0,0,0.242584061187816,0,0,0,0,0,0.47296445977717,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0.368277635987565,0.632924774881769,0,0,0,0.112328631146495,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.334231370655521,0,0,0,0,0.260118695119756,0.328875809207352,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0.318565414324097,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.0843174571537,0.50133791063589,0.144846518960824,0,0.486634870302636,0.283604451492204,0.221729397462564,0,0.261958150995425,0.364295288292542,0.370784442784429,0,0.174129737299267,0,0,0,0,0.198762407366705,2.58070378531837,0,1.13061588384802,0.419499436209906,0.275118041940067,0.835979866147242,0,0,0.33472061276467,0,0.760272105718513,0.488124115096339,0.367663080345869,0,0,0.673588117878509,0.225222960966644,4.5994991239765,3.79706263827252,0.183201743930407,0,0,1.3082821564276,1.98788780678127,0,0.132409180813219,0.860509862246441,0.354668382198357,0,2.1349799145941,1.48000529050296,0,0.404132016209064,0.163461903113459,0,0.576175924479999,0,0,0.570471821544449,0.896692083310806,0.117434498643765,0.323745888736263,0,0.204154171254893,0,0,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0.919463387397059,0.600952235626387,0.340296549480063,0,0.213557388818567,1.27159140695737,0,0.412210116953756,0,0.744467425326359,0.506328996723799,0.0974370051611986,0,0.184099797284599,0.161646056818812,0,0.302256294682921,0,0,0,0.286804595389004,0,0,0,0,0,0,1.56449532329816,1.92972281457866,2.76269842704961,0,0,0,0,0.241011029883482,0,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0,0,0,0.0925884451585296,0,2.07986957055916,0,0.231860809950154,0.469634776943287,0,0.462985512576611,0.190254152234598,0.790204397959275,0,0.246217006087397,0,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0.300343057843917,0,0.224262168690721,0,0.22001485746285,0.129271715757778,7.15312891703765,0.845302752556,0.531876233169741,1.04007436911366,0,1.41849132023278,0.266422179016099,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.542530047399471,0.207970861530807,0.713715955188647,0.315404830067869,0.234282829985426,0.601892199455438,0,0,1.32845119707087,0.368738337083406,0.173767228936166,0.587403472388222,0.343143423810856,0,0,0,0,3.32870879020994,0,0.496215615637554,0,0.280660094433074,0.384417447767103,0,0.160853921143607,1.48418066444991,0.308419387605311,0.355123450626254,0.0821271560138091,0,0.581051892299796,0,0,0,0.229628896329213,0,0.655622074797121,0,0.0770153371044148,0,0,0,1.13733384070897,0.340187410553031,0,0,0.270946437543853,0,0,0,0.447749509444357,0.219259876645935,0.261435451024901,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.676695028044854,0,0.307007349452259,0,0.322260734604821,0.145016693914229,0.170453254832202,0.356128142586949,0,0,0,0.10115778085555,0.464845549297286,0.31481234683064,2.0911118104818,1.84820148105653,0.532306030317022,2.60979897622522,1.48259375283136,0.715624433709956,0.372158369359667,0.316379424718726,0,0.511795582622668,0.42793898803392,1.90921948755562,5.49464048139461,0.359744915166629,0.274537029736055,0.117812402345686,0.404364963146632,1.58510321173008,0.421258456238981,0.48763373908959,0.731140468893853,2.11300293513511,0.409499734223957,0,2.26016233240486,0,1.32687795048244,4.38450885253763,0,0,0.608731130888112,1.239293992399,1.40847801266121,0.143411352204052,0.196498082026242,0.7133421029625,0,0,0.329294892959902,0.75894634753143,0.349934720244983,0,0,3.26672954583968,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0.245040215981032,0,0.28853842595289,0,0,0,0.191505370132367,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.36408156524854,0,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0.174919999992391,0.724999575434793,0.1137934482855,0.508507300585533,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0.591095237907095,0,0,0,0.153900517007594,0.341826167541004,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,1.99052386215701,0.0884575645033392,0,0,0,0,0,0,0,0,0,0.242780379534093,0.394584402849391,0,0,0,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0.0969890164884194,0.2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| |||
|short_description=p@chr12:133373121..133373125,- | |||
}} |
Latest revision as of 06:55, 24 July 2015
Short description: | p@chr12:133373121..133373125, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:133373121..133373125, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.01e-26 | 32 |
smooth muscle cell | 1.43e-18 | 43 |
smooth muscle myoblast | 1.43e-18 | 43 |
hair follicle dermal papilla cell | 4.32e-15 | 3 |
stem cell of epidermis | 4.32e-15 | 3 |
muscle cell | 7.52e-14 | 55 |
muscle precursor cell | 5.62e-13 | 58 |
myoblast | 5.62e-13 | 58 |
multi-potent skeletal muscle stem cell | 5.62e-13 | 58 |
electrically responsive cell | 3.44e-12 | 61 |
electrically active cell | 3.44e-12 | 61 |
mesodermal cell | 4.38e-11 | 121 |
smooth muscle cell of the carotid artery | 6.56e-11 | 2 |
smooth muscle cell of the subclavian artery | 2.80e-09 | 5 |
hair follicle cell | 3.05e-09 | 5 |
aortic smooth muscle cell | 8.23e-08 | 10 |
embryonic cell | 1.11e-07 | 250 |