FFCP PHASE1:Hg19::chr12:25253773..25253777,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:25253773..25253777,+ | |||
|description=CAGE_peak_at_chr12:25253773..25253777,+ | |description=CAGE_peak_at_chr12:25253773..25253777,+ | ||
|id=chr12:25253773..25253777,+ | |id=chr12:25253773..25253777,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.41e-24!24;CL:0000826!2.41e-24!24;CL:0000037!1.25e-16!172;CL:0000566!1.25e-16!172;CL:0002032!1.76e-16!165;CL:0000837!1.76e-16!165;CL:0000988!2.45e-16!182;CL:0000738!1.69e-15!140;CL:0002031!2.18e-14!124;CL:0000542!4.51e-14!53;CL:0000051!4.51e-14!53;CL:0002087!6.59e-13!119;CL:0000838!1.19e-12!52;CL:0002393!2.74e-12!9;CL:0002397!2.74e-12!9;CL:0000236!5.09e-11!14;CL:0000817!1.10e-10!3;CL:0000785!1.41e-07!2;CL:0000955!1.41e-07!2;CL:0000818!1.41e-07!2;CL:0000954!1.41e-07!2;CL:0000816!1.41e-07!2 | |ontology_enrichment_celltype=CL:0000945!2.41e-24!24;CL:0000826!2.41e-24!24;CL:0000037!1.25e-16!172;CL:0000566!1.25e-16!172;CL:0002032!1.76e-16!165;CL:0000837!1.76e-16!165;CL:0000988!2.45e-16!182;CL:0000738!1.69e-15!140;CL:0002031!2.18e-14!124;CL:0000542!4.51e-14!53;CL:0000051!4.51e-14!53;CL:0002087!6.59e-13!119;CL:0000838!1.19e-12!52;CL:0002393!2.74e-12!9;CL:0002397!2.74e-12!9;CL:0000236!5.09e-11!14;CL:0000817!1.10e-10!3;CL:0000785!1.41e-07!2;CL:0000955!1.41e-07!2;CL:0000818!1.41e-07!2;CL:0000954!1.41e-07!2;CL:0000816!1.41e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000775;4.68e-08;3!CL:0000945;4.69e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,4.52e-08,3;CL:0000945,4.75e-08,24;CL:0000826,4.75e-08,24 | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.66e-21;1!UBERON:0003056;6.56e-08;3 | |||
|ontology_enrichment_disease=DOID:2531!2.58e-11!51;DOID:0060083!2.58e-11!51;DOID:0060058!1.44e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.07e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.54e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.84e-08!102;UBERON:0003061!2.84e-08!102;UBERON:0002193!5.25e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;4.66e-21;1!UBERON:0001785;4.66e-21;1!UBERON:0002464;4.66e-21;1!UBERON:0004904;4.66e-21;1!UBERON:0001021;4.66e-21;1!UBERON:0003714;3.18e-11;2!UBERON:0005162;3.18e-11;2!UBERON:0000122;3.18e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.22e-21,1;UBERON:0001785,4.22e-21,1;UBERON:0002464,4.22e-21,1;UBERON:0004904,4.22e-21,1;UBERON:0001021,4.22e-21,1;UBERON:0003902,4.22e-21,1;UBERON:0005425,4.22e-21,1;UBERON:0003714,3.02e-11,2;UBERON:0005162,3.02e-11,2;UBERON:0000122,3.02e-11,2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.0821005894499457,0.393553906568396,0,0,0,0,0,0,0.92960640696362,1.27952309238679,0,0.553995408531877,0.401088894940283,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0.211255286311942,0.425208599930087,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0,0,1.14950487990897,0.661044872784862,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,1.04535523804977,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,1.52927441428475,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0.371606350251437,0.577076851905779,0.640276590135727,0,0,0,0.423347165447766,0,0,0,0,2.50634477090067,0,0,0.403599414382095,1.27753871307098,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,1.58330377895165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,1.97154362503133,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr12:25253773..25253777,+ | |short_description=p@chr12:25253773..25253777,+ | ||
}} | }} |
Latest revision as of 07:45, 24 July 2015
Short description: | p@chr12:25253773..25253777, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:25253773..25253777, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 4.52e-08 | 3 |
lymphocyte of B lineage | 4.75e-08 | 24 |
pro-B cell | 4.75e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.22e-21 | 1 |
cranial nerve | 4.22e-21 | 1 |
nerve trunk | 4.22e-21 | 1 |
nerve connecting eye with brain | 4.22e-21 | 1 |
nerve | 4.22e-21 | 1 |
retinal neural layer | 4.22e-21 | 1 |
presumptive neural retina | 4.22e-21 | 1 |
neural tissue | 3.02e-11 | 2 |
multi cell component structure | 3.02e-11 | 2 |
neuron projection bundle | 3.02e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.54e-09 | 10 |