FFCP PHASE1:Hg19::chr12:50351185..50351192,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:50351185..50351192,+ | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_at_chr12:50351185..50351192,+ | |description=CAGE_peak_at_chr12:50351185..50351192,+ | ||
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|ontology_enrichment_celltype=CL:0002274!5.35e-08!5;CL:0000457!5.35e-08!5;CL:0002191!5.35e-08!5;CL:0000097!5.35e-08!5;CL:0000831!5.35e-08!5;CL:0002028!5.35e-08!5 | |ontology_enrichment_celltype=CL:0002274!5.35e-08!5;CL:0000457!5.35e-08!5;CL:0002191!5.35e-08!5;CL:0000097!5.35e-08!5;CL:0000831!5.35e-08!5;CL:0002028!5.35e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000097;4.21e-21;5!CL:0000163;2.19e-12;9 | |ontology_enrichment_celltype_v019=CL:0000097;4.21e-21;5!CL:0000163;2.19e-12;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.21e-21,5;CL:0002028,4.21e-21,5;CL:0000163,2.19e-12,9 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.55e-98;1!UBERON:0007297;4.52e-50;2!UBERON:0003918;3.02e-11;10!UBERON:0007687;3.02e-11;10 | |ontology_enrichment_development_v019=UBERON:0005754;2.55e-98;1!UBERON:0007297;4.52e-50;2!UBERON:0003918;3.02e-11;10!UBERON:0007687;3.02e-11;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!7.81e-45!3;UBERON:0004054!7.81e-45!3;UBERON:0000998!2.58e-34!1;UBERON:0006868!2.58e-34!1;UBERON:0001000!3.61e-34!1;UBERON:0005352!3.61e-34!1;UBERON:0005904!5.98e-34!4;UBERON:0003135!4.52e-13!11;UBERON:0002113!9.28e-12!27;UBERON:0003918!9.28e-12!27;UBERON:0005095!9.28e-12!27;UBERON:0007687!9.28e-12!27;UBERON:0000489!4.87e-10!32;UBERON:0006554!1.72e-07!44;UBERON:0001008!2.44e-07!45;UBERON:0003101!5.09e-07!22;UBERON:0000079!5.09e-07!22 | |ontology_enrichment_uberon=UBERON:0006947!7.81e-45!3;UBERON:0004054!7.81e-45!3;UBERON:0000998!2.58e-34!1;UBERON:0006868!2.58e-34!1;UBERON:0001000!3.61e-34!1;UBERON:0005352!3.61e-34!1;UBERON:0005904!5.98e-34!4;UBERON:0003135!4.52e-13!11;UBERON:0002113!9.28e-12!27;UBERON:0003918!9.28e-12!27;UBERON:0005095!9.28e-12!27;UBERON:0007687!9.28e-12!27;UBERON:0000489!4.87e-10!32;UBERON:0006554!1.72e-07!44;UBERON:0001008!2.44e-07!45;UBERON:0003101!5.09e-07!22;UBERON:0000079!5.09e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000998;2.55e-98;1!UBERON:0006868;2.55e-98;1!UBERON:0006947;5.96e-34;3!UBERON:0004054;5.96e-34;3!UBERON:0005904;7.14e-26;4!UBERON:0000473;1.07e-13;8!UBERON:0000058;3.02e-11;10!UBERON:0003135;2.37e-10;11!UBERON:0003937;1.33e-09;12!UBERON:0005399;1.33e-09;12 | |ontology_enrichment_uberon_v019=UBERON:0000998;2.55e-98;1!UBERON:0006868;2.55e-98;1!UBERON:0006947;5.96e-34;3!UBERON:0004054;5.96e-34;3!UBERON:0005904;7.14e-26;4!UBERON:0000473;1.07e-13;8!UBERON:0000058;3.02e-11;10!UBERON:0003135;2.37e-10;11!UBERON:0003937;1.33e-09;12!UBERON:0005399;1.33e-09;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,2.55e-98,1;UBERON:0006868,2.55e-98,1;UBERON:0006947,5.96e-34,3;UBERON:0004054,5.96e-34,3;UBERON:0005904,7.14e-26,4;UBERON:0000473,1.07e-13,8;UBERON:0000080,2.45e-12,9;UBERON:0002120,2.45e-12,9;UBERON:0004875,2.45e-12,9;UBERON:0005721,2.45e-12,9;UBERON:0005754,2.45e-12,9;UBERON:0007297,2.45e-12,9;UBERON:0003135,2.37e-10,11;UBERON:0004876,2.37e-10,11;UBERON:0003937,1.33e-09,12;UBERON:0005399,1.33e-09,12;UBERON:0003887,1.33e-09,12 | |||
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|short_description=p@chr12:50351185..50351192,+ | |short_description=p@chr12:50351185..50351192,+ | ||
}} | }} |
Latest revision as of 09:11, 24 July 2015
Short description: | p@chr12:50351185..50351192, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:50351185..50351192, + |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.21e-21 | 5 |
basophil mast progenitor cell | 4.21e-21 | 5 |
endocrine cell | 2.19e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 2.55e-98 | 1 |
seminal fluid secreting gland | 2.55e-98 | 1 |
male genital duct | 5.96e-34 | 3 |
internal male genitalia | 5.96e-34 | 3 |
duct of male reproductive system | 7.14e-26 | 4 |
testis | 1.07e-13 | 8 |
mesonephros | 2.45e-12 | 9 |
pronephros | 2.45e-12 | 9 |
nephrogenic cord | 2.45e-12 | 9 |
pronephric mesoderm | 2.45e-12 | 9 |
rostral part of nephrogenic cord | 2.45e-12 | 9 |
presumptive pronephric mesoderm | 2.45e-12 | 9 |
male reproductive organ | 2.37e-10 | 11 |
urogenital ridge | 2.37e-10 | 11 |
sex gland | 1.33e-09 | 12 |
male reproductive gland | 1.33e-09 | 12 |
intraembryonic coelom | 1.33e-09 | 12 |