FFCP PHASE1:Hg19::chr12:52426680..52426686,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52426680..52426686,- | |||
|coexpression_cluster_id=C43 | |coexpression_cluster_id=C43 | ||
|description=CAGE_peak_at_chr12:52426680..52426686,- | |description=CAGE_peak_at_chr12:52426680..52426686,- | ||
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|ontology_enrichment_celltype=CL:0002057!1.88e-10!42;CL:0000860!2.57e-09!45 | |ontology_enrichment_celltype=CL:0002057!1.88e-10!42;CL:0000860!2.57e-09!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.10e-13;33!CL:0002057;2.10e-13;33!CL:0002195;7.31e-10;2!CL:0002571;7.31e-10;2!CL:0000473;1.22e-09;39!CL:0000234;1.22e-09;39 | |ontology_enrichment_celltype_v019=CL:0000860;2.10e-13;33!CL:0002057;2.10e-13;33!CL:0002195;7.31e-10;2!CL:0002571;7.31e-10;2!CL:0000473;1.22e-09;39!CL:0000234;1.22e-09;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.91e-11,42;CL:0002057,3.91e-11,42;CL:0000557,3.33e-10,67;CL:0002195,6.70e-10,2;CL:0002571,6.70e-10,2;CL:0000473,1.79e-09,48;CL:0000234,1.79e-09,48;CL:0000839,7.27e-09,66;CL:0002009,3.05e-08,61;CL:0000766,6.39e-08,72;CL:0002194,3.68e-07,59;CL:0000576,3.68e-07,59;CL:0000040,3.68e-07,59;CL:0000559,3.68e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;8.11e-08;42 | |ontology_enrichment_development_v019=CL:0002057;8.11e-08;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-22!115;UBERON:0001049!5.27e-13!57;UBERON:0005068!5.27e-13!57;UBERON:0006241!5.27e-13!57;UBERON:0007135!5.27e-13!57;UBERON:0002780!1.11e-10!41;UBERON:0001890!1.11e-10!41;UBERON:0006240!1.11e-10!41;UBERON:0002616!2.53e-10!59;UBERON:0003080!2.82e-10!42;UBERON:0000062!1.21e-09!511;UBERON:0003075!2.42e-09!86;UBERON:0007284!2.42e-09!86;UBERON:0002346!2.97e-09!90;UBERON:0001017!4.65e-09!82;UBERON:0005743!5.97e-09!86;UBERON:0001893!1.53e-08!34;UBERON:0000955!2.61e-08!69;UBERON:0006238!2.61e-08!69;UBERON:0002791!7.10e-08!33;UBERON:0000073!8.37e-08!94;UBERON:0001016!8.37e-08!94;UBERON:0002020!2.67e-07!34;UBERON:0003528!2.67e-07!34;UBERON:0001869!4.93e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!1.74e-22!115;UBERON:0001049!5.27e-13!57;UBERON:0005068!5.27e-13!57;UBERON:0006241!5.27e-13!57;UBERON:0007135!5.27e-13!57;UBERON:0002780!1.11e-10!41;UBERON:0001890!1.11e-10!41;UBERON:0006240!1.11e-10!41;UBERON:0002616!2.53e-10!59;UBERON:0003080!2.82e-10!42;UBERON:0000062!1.21e-09!511;UBERON:0003075!2.42e-09!86;UBERON:0007284!2.42e-09!86;UBERON:0002346!2.97e-09!90;UBERON:0001017!4.65e-09!82;UBERON:0005743!5.97e-09!86;UBERON:0001893!1.53e-08!34;UBERON:0000955!2.61e-08!69;UBERON:0006238!2.61e-08!69;UBERON:0002791!7.10e-08!33;UBERON:0000073!8.37e-08!94;UBERON:0001016!8.37e-08!94;UBERON:0002020!2.67e-07!34;UBERON:0003528!2.67e-07!34;UBERON:0001869!4.93e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.01e-11;2!UBERON:0006947;1.75e-07;3!UBERON:0004054;1.75e-07;3!UBERON:0001896;4.66e-07;3!UBERON:0005290;4.66e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0000007;5.01e-11;2!UBERON:0006947;1.75e-07;3!UBERON:0004054;1.75e-07;3!UBERON:0001896;4.66e-07;3!UBERON:0005290;4.66e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.79e-11,2;UBERON:0004765,8.29e-11,90;UBERON:0001474,1.15e-10,82;UBERON:0002371,3.69e-10,76;UBERON:0001434,2.27e-09,100;UBERON:0002405,9.46e-08,93;UBERON:0006947,1.67e-07,3;UBERON:0004054,1.67e-07,3;UBERON:0002390,3.33e-07,98;UBERON:0003061,3.33e-07,98;UBERON:0001896,3.66e-07,3;UBERON:0005290,3.66e-07,3;UBERON:0010096,3.66e-07,3 | |||
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|short_description=p@chr12:52426680..52426686,- | |short_description=p@chr12:52426680..52426686,- | ||
}} | }} |
Latest revision as of 09:26, 24 July 2015
Short description: | p@chr12:52426680..52426686, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52426680..52426686, - |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.91e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.91e-11 | 42 |
granulocyte monocyte progenitor cell | 3.33e-10 | 67 |
hepatic stem cell | 6.70e-10 | 2 |
hepatic mesenchymal stem cell | 6.70e-10 | 2 |
defensive cell | 1.79e-09 | 48 |
phagocyte | 1.79e-09 | 48 |
myeloid lineage restricted progenitor cell | 7.27e-09 | 66 |
macrophage dendritic cell progenitor | 3.05e-08 | 61 |
myeloid leukocyte | 6.39e-08 | 72 |
monopoietic cell | 3.68e-07 | 59 |
monocyte | 3.68e-07 | 59 |
monoblast | 3.68e-07 | 59 |
promonocyte | 3.68e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.79e-11 | 2 |
skeletal element | 8.29e-11 | 90 |
bone element | 1.15e-10 | 82 |
bone marrow | 3.69e-10 | 76 |
skeletal system | 2.27e-09 | 100 |
immune system | 9.46e-08 | 93 |
male genital duct | 1.67e-07 | 3 |
internal male genitalia | 1.67e-07 | 3 |
hematopoietic system | 3.33e-07 | 98 |
blood island | 3.33e-07 | 98 |
medulla oblongata | 3.66e-07 | 3 |
myelencephalon | 3.66e-07 | 3 |
future myelencephalon | 3.66e-07 | 3 |