FFCP PHASE1:Hg19::chr12:52913784..52913810,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52913784..52913810,+ | |||
|coexpression_cluster_id=C207 | |coexpression_cluster_id=C207 | ||
|description=CAGE_peak_at_chr12:52913784..52913810,+ | |description=CAGE_peak_at_chr12:52913784..52913810,+ | ||
|id=chr12:52913784..52913810,+ | |id=chr12:52913784..52913810,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.62e-34!43;CL:0000223!3.14e-23!59;CL:0002159!7.94e-21!13;CL:0002368!7.94e-21!13;CL:0000066!3.44e-20!254;CL:0002251!3.00e-19!21;CL:0000622!1.36e-14!5;CL:0000154!4.31e-12!6;CL:0002202!8.52e-12!9;CL:0002632!8.52e-12!9;CL:0000076!4.49e-11!62;CL:0002328!4.19e-10!3;CL:0002077!5.49e-10!33;CL:0000068!9.75e-10!3;CL:0000069!9.75e-10!3;CL:0000307!9.75e-10!3;CL:0000377!9.75e-10!3;CL:0002623!1.34e-09!3;CL:0002621!3.21e-09!3;CL:0000362!3.39e-09!8;CL:0002166!5.58e-09!3;CL:0000240!2.78e-08!6;CL:0000311!2.78e-08!6;CL:0000079!2.78e-08!6;CL:0000237!2.78e-08!6;CL:0000036!2.78e-08!6;CL:0000357!2.78e-08!6;CL:0000114!2.78e-08!6;CL:0000150!6.47e-08!9;CL:0000244!2.04e-07!4;CL:0000731!2.04e-07!4;CL:0000220!2.25e-07!246;CL:0002321!3.04e-07!248;CL:0002327!3.11e-07!4;CL:0000575!3.20e-07!2 | |ontology_enrichment_celltype=CL:0002076!1.62e-34!43;CL:0000223!3.14e-23!59;CL:0002159!7.94e-21!13;CL:0002368!7.94e-21!13;CL:0000066!3.44e-20!254;CL:0002251!3.00e-19!21;CL:0000622!1.36e-14!5;CL:0000154!4.31e-12!6;CL:0002202!8.52e-12!9;CL:0002632!8.52e-12!9;CL:0000076!4.49e-11!62;CL:0002328!4.19e-10!3;CL:0002077!5.49e-10!33;CL:0000068!9.75e-10!3;CL:0000069!9.75e-10!3;CL:0000307!9.75e-10!3;CL:0000377!9.75e-10!3;CL:0002623!1.34e-09!3;CL:0002621!3.21e-09!3;CL:0000362!3.39e-09!8;CL:0002166!5.58e-09!3;CL:0000240!2.78e-08!6;CL:0000311!2.78e-08!6;CL:0000079!2.78e-08!6;CL:0000237!2.78e-08!6;CL:0000036!2.78e-08!6;CL:0000357!2.78e-08!6;CL:0000114!2.78e-08!6;CL:0000150!6.47e-08!9;CL:0000244!2.04e-07!4;CL:0000731!2.04e-07!4;CL:0000220!2.25e-07!246;CL:0002321!3.04e-07!248;CL:0002327!3.11e-07!4;CL:0000575!3.20e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002368;2.23e-30;13!CL:0002076;2.82e-29;42!CL:0002202;1.29e-20;9!CL:0002632;1.29e-20;9!CL:0002159;1.11e-17;14!CL:0002328;9.07e-17;3!CL:0000622;1.51e-16;5!CL:0000307;3.23e-16;3!CL:0002623;8.75e-16;3!CL:0002251;1.03e-14;20!CL:0000240;4.18e-14;6!CL:0000311;4.18e-14;6!CL:0000079;4.18e-14;6!CL:0000237;4.18e-14;6!CL:0000154;8.18e-14;6!CL:0000244;3.57e-12;4!CL:0000731;3.57e-12;4!CL:0000575;1.31e-11;2!CL:0000312;3.55e-10;5!CL:0000362;1.31e-09;9!CL:0000150;3.04e-09;9!CL:0002077;5.34e-08;34!CL:0002577;1.19e-07;3!CL:0002621;1.48e-07;3!CL:0002231;2.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,9.30e-39,42;CL:0002368,2.71e-30,13;CL:0000223,7.05e-27,58;CL:0002202,1.46e-20,9;CL:0002632,1.46e-20,9;CL:0000066,1.95e-20,253;CL:0002159,1.03e-17,14;CL:0002328,8.85e-17,3;CL:0000622,1.14e-16,5;CL:0000068,3.98e-16,3;CL:0000069,3.98e-16,3;CL:0000307,3.98e-16,3;CL:0000377,3.98e-16,3;CL:0002623,6.98e-16,3;CL:0002251,8.46e-15,20;CL:0000240,4.80e-14,6;CL:0000311,4.80e-14,6;CL:0000079,4.80e-14,6;CL:0000237,4.80e-14,6;CL:0000036,4.80e-14,6;CL:0000357,4.80e-14,6;CL:0000114,4.80e-14,6;CL:0000154,6.49e-14,6;CL:0000244,2.74e-12,4;CL:0000731,2.74e-12,4;CL:0000575,1.18e-11,2;CL:0000312,3.78e-10,5;CL:0002321,1.01e-09,250;CL:0000362,1.29e-09,9;CL:0000150,2.62e-09,9;CL:0002077,1.18e-08,34;CL:0002621,1.29e-07,3;CL:0002577,1.53e-07,3;CL:0002231,2.59e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;3.23e-16;3!CL:0000223;1.94e-14;58!CL:0000357;4.18e-14;6!CL:0000114;4.18e-14;6 | |||
|ontology_enrichment_disease=DOID:1749!2.80e-16!14 | |ontology_enrichment_disease=DOID:1749!2.80e-16!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.35e-20!72;UBERON:0000166!7.23e-19!21;UBERON:0000161!8.48e-16!35;UBERON:0000165!1.05e-15!28;UBERON:0000930!1.05e-15!28;UBERON:0004119!1.54e-14!169;UBERON:0000925!1.54e-14!169;UBERON:0006595!1.54e-14!169;UBERON:0003729!6.57e-13!5;UBERON:0007196!3.62e-12!14;UBERON:0001558!3.62e-12!14;UBERON:0000065!3.92e-12!53;UBERON:0003102!9.53e-12!95;UBERON:0001444!9.63e-11!48;UBERON:0003343!1.91e-10!4;UBERON:0004785!1.91e-10!4;UBERON:0004815!4.19e-10!3;UBERON:0002031!4.19e-10!3;UBERON:0003126!5.86e-10!7;UBERON:0001005!5.86e-10!7;UBERON:0000344!1.57e-09!12;UBERON:0000365!1.83e-09!5;UBERON:0001949!3.21e-09!3;UBERON:0000974!1.38e-08!10;UBERON:0005631!1.46e-08!14;UBERON:0000158!1.46e-08!14;UBERON:0000072!2.39e-08!46;UBERON:0001723!2.79e-08!3;UBERON:0001033!2.79e-08!3;UBERON:0010056!2.79e-08!3;UBERON:0001007!5.44e-08!155;UBERON:0001555!5.44e-08!155;UBERON:0007026!5.44e-08!155;UBERON:0005178!7.03e-08!34;UBERON:0002224!7.03e-08!34;UBERON:0005910!7.05e-08!6;UBERON:0002185!1.19e-07!4;UBERON:0006562!1.24e-07!11;UBERON:0005181!1.38e-07!35;UBERON:0001911!3.11e-07!4;UBERON:0005333!3.11e-07!4;UBERON:0008425!3.11e-07!4;UBERON:0005311!3.11e-07!4;UBERON:0001708!8.02e-07!4;UBERON:0001704!8.02e-07!4 | |ontology_enrichment_uberon=UBERON:0001004!1.35e-20!72;UBERON:0000166!7.23e-19!21;UBERON:0000161!8.48e-16!35;UBERON:0000165!1.05e-15!28;UBERON:0000930!1.05e-15!28;UBERON:0004119!1.54e-14!169;UBERON:0000925!1.54e-14!169;UBERON:0006595!1.54e-14!169;UBERON:0003729!6.57e-13!5;UBERON:0007196!3.62e-12!14;UBERON:0001558!3.62e-12!14;UBERON:0000065!3.92e-12!53;UBERON:0003102!9.53e-12!95;UBERON:0001444!9.63e-11!48;UBERON:0003343!1.91e-10!4;UBERON:0004785!1.91e-10!4;UBERON:0004815!4.19e-10!3;UBERON:0002031!4.19e-10!3;UBERON:0003126!5.86e-10!7;UBERON:0001005!5.86e-10!7;UBERON:0000344!1.57e-09!12;UBERON:0000365!1.83e-09!5;UBERON:0001949!3.21e-09!3;UBERON:0000974!1.38e-08!10;UBERON:0005631!1.46e-08!14;UBERON:0000158!1.46e-08!14;UBERON:0000072!2.39e-08!46;UBERON:0001723!2.79e-08!3;UBERON:0001033!2.79e-08!3;UBERON:0010056!2.79e-08!3;UBERON:0001007!5.44e-08!155;UBERON:0001555!5.44e-08!155;UBERON:0007026!5.44e-08!155;UBERON:0005178!7.03e-08!34;UBERON:0002224!7.03e-08!34;UBERON:0005910!7.05e-08!6;UBERON:0002185!1.19e-07!4;UBERON:0006562!1.24e-07!11;UBERON:0005181!1.38e-07!35;UBERON:0001911!3.11e-07!4;UBERON:0005333!3.11e-07!4;UBERON:0008425!3.11e-07!4;UBERON:0005311!3.11e-07!4;UBERON:0001708!8.02e-07!4;UBERON:0001704!8.02e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;9.07e-17;3!UBERON:0002031;9.07e-17;3!UBERON:0007196;3.99e-12;15!UBERON:0001558;3.99e-12;15!UBERON:0000486;2.21e-10;12!UBERON:0002185;3.00e-10;5!UBERON:0000365;7.83e-10;5!UBERON:0000161;6.61e-09;19!UBERON:0000166;6.61e-09;19!UBERON:0001041;9.07e-09;14!UBERON:0005178;1.46e-08;34!UBERON:0002224;1.46e-08;34!UBERON:0005910;2.89e-08;6!UBERON:0001044;3.93e-08;6!UBERON:0003293;3.93e-08;6!UBERON:0003294;3.93e-08;6!UBERON:0010047;3.93e-08;6!UBERON:0003408;3.93e-08;6!UBERON:0000167;3.93e-08;6!UBERON:0005181;4.70e-08;35!UBERON:0000165;8.35e-08;28!UBERON:0001043;1.48e-07;3!UBERON:0001949;1.48e-07;3!UBERON:0005911;1.88e-07;36!UBERON:0000485;1.95e-07;7!UBERON:0003126;3.30e-07;7!UBERON:0001005;3.30e-07;7 | |||
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| ||
|short_description=p@chr12:52913784..52913810,+ | |short_description=p@chr12:52913784..52913810,+ | ||
}} | }} |
Latest revision as of 09:38, 24 July 2015
Short description: | p@chr12:52913784..52913810, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52913784..52913810, + |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 8.85e-17 | 3 |
epithelium of bronchus | 8.85e-17 | 3 |
endoderm-derived structure | 6.56e-14 | 160 |
endoderm | 6.56e-14 | 160 |
presumptive endoderm | 6.56e-14 | 160 |
respiratory system | 4.23e-12 | 74 |
tracheobronchial tree | 4.28e-12 | 15 |
lower respiratory tract | 4.28e-12 | 15 |
surface structure | 4.48e-11 | 99 |
bronchus | 2.96e-10 | 5 |
urothelium | 6.35e-10 | 5 |
thoracic cavity element | 1.65e-08 | 34 |
thoracic cavity | 1.65e-08 | 34 |
transitional epithelium | 2.43e-08 | 6 |
thoracic segment organ | 3.14e-08 | 35 |
saliva-secreting gland | 3.52e-08 | 6 |
gland of oral region | 3.52e-08 | 6 |
gland of foregut | 3.52e-08 | 6 |
oral gland | 3.52e-08 | 6 |
oral cavity | 3.52e-08 | 6 |
oral opening | 1.11e-07 | 22 |
orifice | 1.28e-07 | 36 |
gingival epithelium | 1.29e-07 | 3 |
mouth | 1.49e-07 | 29 |
stomodeum | 1.49e-07 | 29 |
esophagus | 1.63e-07 | 3 |
esophageal region | 1.63e-07 | 3 |
epithelial fold | 2.13e-07 | 47 |
head | 3.09e-07 | 56 |
trachea | 3.60e-07 | 7 |
respiratory airway | 3.60e-07 | 7 |
subdivision of head | 7.79e-07 | 49 |