FFCP PHASE1:Hg19::chr12:72240553..72240557,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:72240553..72240557,+ | |||
|description=CAGE_peak_at_chr12:72240553..72240557,+ | |||
|id=chr12:72240553..72240557,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.95e-12!140;CL:0000037!1.07e-11!172;CL:0000566!1.07e-11!172;CL:0000988!9.02e-11!182;CL:0002031!1.18e-10!124;CL:0002032!3.64e-10!165;CL:0000837!3.64e-10!165;CL:0002087!2.06e-09!119;CL:0002393!2.34e-09!9;CL:0002397!2.34e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000623;4.62e-19;3!CL:0002393;4.59e-10;6!CL:0002397;4.59e-10;6!CL:0000791;2.15e-08;18!CL:0000789;2.15e-08;18!CL:0002419;2.15e-08;18!CL:0000895;2.42e-07;1!CL:0000542;8.20e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.59e-19,3;CL:0000825,2.59e-19,3;CL:0000738,3.43e-12,136;CL:0002393,2.22e-11,9;CL:0002397,2.22e-11,9;CL:0002031,3.68e-11,120;CL:0002087,2.73e-10,115;CL:0000838,3.58e-10,52;CL:0000542,6.01e-10,53;CL:0000051,6.01e-10,53;CL:0002032,1.05e-09,161;CL:0000837,1.05e-09,161;CL:0000037,3.82e-09,168;CL:0000988,1.74e-08,177;CL:0000791,2.18e-08,18;CL:0000789,2.18e-08,18;CL:0002420,2.18e-08,18;CL:0002419,2.18e-08,18;CL:0000790,2.18e-08,18;CL:0000810,1.18e-07,1;CL:0000895,1.18e-07,1;CL:0002436,1.18e-07,1;CL:0002427,1.18e-07,1;CL:0002428,1.18e-07,1;CL:0002429,1.18e-07,1;CL:0002433,1.18e-07,1;CL:0002431,1.18e-07,1;CL:0002432,1.18e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;2.15e-08;18!UBERON:0005425;8.79e-08;1!CL:0002427;2.42e-07;1!CL:0000051;8.20e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;8.79e-08;1!UBERON:0001785;8.79e-08;1!UBERON:0002464;8.79e-08;1!UBERON:0004904;8.79e-08;1!UBERON:0001021;8.79e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,7.03e-08,1;UBERON:0001785,7.03e-08,1;UBERON:0002464,7.03e-08,1;UBERON:0004904,7.03e-08,1;UBERON:0001021,7.03e-08,1;UBERON:0003902,7.03e-08,1;UBERON:0005425,7.03e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0,0.293600439334847,3.87796785972314,1.60435557976113,2.82114131930607,0,0,0,0.290796477559129,0,0.242584061187816,0.232429036905685,0,0,0,0.256160706529101,0,0.689491361473237,0,1.35426486594342,0,0,0.224723484445085,0,0,0,0,0,0,0.580418477257168,0,0,0.251248665256743,0,0,0,0,0,0.633765858935825,0.637812899895131,0.419317291016752,0.561643155732475,1.05123824989054,0,1.42506371870624,0.39783335439818,0.547992461293902,0,0.546138611262131,0,0.426730222566507,0,0,0,0,2.27685187643779,0.587237189370939,2.29363936875137,0,1.68152568894461,0.263384084775077,0.590129310341499,2.35806457649499,0.411202997999018,0.167186495390678,0.32592226663359,1.89379122293893,0,0,0.883817722424512,1.55073726208535,0,0.640456598628376,0.390178042679635,0.328875809207352,0,0.869409257205157,0.444859689486181,1.33770414044857,1.04535523804977,0.453237370790265,1.91610246800961,1.71813722741315,0,1.27426165729639,0,0,0.301150238155546,0.255973222308837,0,0,0,0.80642697289893,1.33720097891754,2.31719046212478,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0.280901613404497,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0,0,0,0,0.468008530278475,0,0,0,0,0.179117045405697,0,0,0,0.264145302039678,0.414656231081544,0.576479813667846,0.12624243342638,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0.502257091432126,0,0,0,0,0,0.410952645100767,0,0,1.57624608161542,1.72502059887614,2.18183161675572,0,0,0,0.167516265334349,0,1.49801404789436,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,0.862856803274467,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.784306353074702,0,0,0,0.412164046590889,0.27470839445503,0.082509499920588,0,0,0,0,0,0.15350367472613,0.413509717453592,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,1.58625035258854,0.106824071127473,0,0,0,0.144269212976445,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0.921722292925374,0,0.166849141711909,0,0,0,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0.20453736500431,0.369254416383208,0,0.269605053441981,0.179021174675609,0,0.0986434056369336,2.3948309234694,0,0,0.185536196323703,0,0.260427761085233,0.0874599999961957,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0.139423744278603,0.153900517007594,0.227884111694002,0.23056390438806,0.0897576444097721,0,0,0.0915975934018623,0,0,0.156980256395025,0.166211681900156,0,0.19606253431774,0,0.37950746544837,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0.208843899010911,0.067401132980677,0,0,0.364909578431332,0,0,0.394584402849391,0,0,0.189559738885464,0,0.311064574191741,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,0.0882561266915003,0.225980740780532,0,0,0,0.391102765469606,0,0.213452994739353,0,0.144090417154106,0.114536596165916,0.171594997861965,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.558564802544508,0.229160424011684,0,0.399358000997982,0,0,0,0,0,0,0.0824158583811665,0,0.196854963029498,0.0846733320657845,0,0.136203406111576,0.321506296930038,0.137539436597234,0.83088067605837,0,1.5476039091159,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,1.70388021785422,0,0,0,0,0,0,0,0.213574825135389,0,0.828478110694391,0,0,0,0,0,1.0027595760908,0.612691153526923,0,0.314108192500469,0,0,0.250381861413,0,0.221858103073705,0.124192805882767,0.276697269872462,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0.429642228169954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0.212574920101683,1.48722917110803,0,0,0.0788617450012534,0.80057074828547,0,0,0,0,0.1596338590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| |||
|short_description=p@chr12:72240553..72240557,+ | |||
}} |
Latest revision as of 12:15, 24 July 2015
Short description: | p@chr12:72240553..72240557, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:72240553..72240557, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 7.03e-08 | 1 |
cranial nerve | 7.03e-08 | 1 |
nerve trunk | 7.03e-08 | 1 |
nerve connecting eye with brain | 7.03e-08 | 1 |
nerve | 7.03e-08 | 1 |
retinal neural layer | 7.03e-08 | 1 |
presumptive neural retina | 7.03e-08 | 1 |