FFCP PHASE1:Hg19::chr12:97904646..97904653,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:97904646..97904653,+
|short_description=p@chr12:97904646..97904653,+
|description=CAGE_peak_at_chr12:97904646..97904653,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:97904646..97904653,+ | |||
|coexpression_cluster_id=C1023 | |||
|description=CAGE_peak_at_chr12:97904646..97904653,+ | |||
|id=chr12:97904646..97904653,+ | |||
|ontology_enrichment_celltype=CL:0000064!2.03e-15!3;CL:0005012!2.03e-15!3;CL:0000067!2.03e-15!3;CL:0002304!2.03e-15!3;CL:0002322!9.24e-15!5;CL:0000133!1.41e-08!59;CL:0000540!1.24e-07!6;CL:0000031!1.24e-07!6;CL:0000404!1.24e-07!6;CL:0002605!3.23e-07!3;CL:0000221!8.85e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.04e-10;3!CL:0000067;1.04e-10;3!CL:0005012;1.04e-10;3!CL:0002304;1.04e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.20e-10,3;CL:0000067,1.20e-10,3;CL:0005012,1.20e-10,3;CL:0002304,1.20e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.58e-57;2!UBERON:0005754;8.64e-30;1!UBERON:0007123;4.93e-07;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!1.03e-15!3;UBERON:0004054!1.03e-15!3;UBERON:0001778!2.03e-15!3;UBERON:0001775!2.03e-15!3;UBERON:0001896!2.02e-14!3;UBERON:0005290!2.02e-14!3;UBERON:0010096!2.02e-14!3;UBERON:0002298!2.89e-14!8;UBERON:0005904!6.73e-12!4;UBERON:0000488!1.11e-11!4;UBERON:0003076!1.35e-10!15;UBERON:0003057!1.35e-10!15;UBERON:0001049!1.59e-10!57;UBERON:0005068!1.59e-10!57;UBERON:0006241!1.59e-10!57;UBERON:0007135!1.59e-10!57;UBERON:0001017!2.30e-10!82;UBERON:0002148!2.79e-10!2;UBERON:0009662!2.79e-10!2;UBERON:0003075!5.57e-10!86;UBERON:0007284!5.57e-10!86;UBERON:0000073!9.23e-10!94;UBERON:0001016!9.23e-10!94;UBERON:0005743!9.76e-10!86;UBERON:0004733!2.01e-09!12;UBERON:0002028!2.01e-09!12;UBERON:0007277!2.01e-09!12;UBERON:0002346!2.17e-09!90;UBERON:0002020!5.69e-09!34;UBERON:0003528!5.69e-09!34;UBERON:0004732!1.12e-08!13;UBERON:0002616!1.87e-08!59;UBERON:0002203!6.37e-08!6;UBERON:0001768!6.37e-08!6;UBERON:0000988!4.01e-07!3;UBERON:0006331!4.01e-07!3;UBERON:0004121!4.95e-07!169;UBERON:0000955!8.66e-07!69;UBERON:0006238!8.66e-07!69;UBERON:0000924!9.00e-07!173;UBERON:0006601!9.00e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.48e-84;3!UBERON:0004054;1.48e-84;3!UBERON:0005904;1.06e-63;4!UBERON:0000998;8.64e-30;1!UBERON:0006868;8.64e-30;1!UBERON:0001000;2.73e-29;1!UBERON:0001301;2.73e-29;1!UBERON:0005352;2.73e-29;1!UBERON:0000058;4.46e-26;10!UBERON:0003135;8.68e-24;11!UBERON:0000341;1.54e-15;2!UBERON:0004175;7.58e-13;21!UBERON:0003101;2.69e-12;22!UBERON:0000079;2.69e-12;22!UBERON:0001778;1.04e-10;3!UBERON:0001775;1.04e-10;3!UBERON:0000488;2.35e-08;4!UBERON:0002046;4.93e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,7.21e-85,3;UBERON:0004054,7.21e-85,3;UBERON:0005904,6.18e-64,4;UBERON:0000998,7.48e-30,1;UBERON:0006868,7.48e-30,1;UBERON:0001000,1.78e-29,1;UBERON:0005352,1.78e-29,1;UBERON:0001301,2.37e-29,1;UBERON:0003135,7.14e-24,11;UBERON:0000341,1.54e-15,2;UBERON:0000058,3.62e-14,19;UBERON:0000080,1.23e-13,9;UBERON:0002120,1.23e-13,9;UBERON:0004875,1.23e-13,9;UBERON:0005721,1.23e-13,9;UBERON:0005754,1.23e-13,9;UBERON:0007297,1.23e-13,9;UBERON:0003101,2.44e-12,22;UBERON:0000079,2.44e-12,22;UBERON:0004876,2.42e-11,11;UBERON:0004175,6.05e-11,25;UBERON:0001778,1.20e-10,3;UBERON:0001775,1.20e-10,3;UBERON:0003887,1.77e-10,12;UBERON:0000488,2.61e-08,4;UBERON:0002046,5.08e-07,5;UBERON:0004117,5.08e-07,5;UBERON:0007689,5.08e-07,5;UBERON:0007123,5.08e-07,5;UBERON:0003091,5.08e-07,5 | |||
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| ||
|short_description=p@chr12:97904646..97904653,+ | |||
}} | }} |
Latest revision as of 13:58, 24 July 2015
Short description: | p@chr12:97904646..97904653, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:97904646..97904653, + |
Coexpression cluster: | C1023_seminal_ductus_thyroid_pituitary_throat_small_epididymis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.20e-10 | 3 |
ciliated epithelial cell | 1.20e-10 | 3 |
multi-ciliated epithelial cell | 1.20e-10 | 3 |
non-pigmented ciliary epithelial cell | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 7.21e-85 | 3 |
internal male genitalia | 7.21e-85 | 3 |
duct of male reproductive system | 6.18e-64 | 4 |
seminal vesicle | 7.48e-30 | 1 |
seminal fluid secreting gland | 7.48e-30 | 1 |
vas deferens | 1.78e-29 | 1 |
spermatic cord | 1.78e-29 | 1 |
epididymis | 2.37e-29 | 1 |
male reproductive organ | 7.14e-24 | 11 |
throat | 1.54e-15 | 2 |
duct | 3.62e-14 | 19 |
mesonephros | 1.23e-13 | 9 |
pronephros | 1.23e-13 | 9 |
nephrogenic cord | 1.23e-13 | 9 |
pronephric mesoderm | 1.23e-13 | 9 |
rostral part of nephrogenic cord | 1.23e-13 | 9 |
presumptive pronephric mesoderm | 1.23e-13 | 9 |
male organism | 2.44e-12 | 22 |
male reproductive system | 2.44e-12 | 22 |
urogenital ridge | 2.42e-11 | 11 |
internal genitalia | 6.05e-11 | 25 |
ciliary epithelium | 1.20e-10 | 3 |
ciliary body | 1.20e-10 | 3 |
intraembryonic coelom | 1.77e-10 | 12 |
atypical epithelium | 2.61e-08 | 4 |
thyroid gland | 5.08e-07 | 5 |
pharyngeal pouch | 5.08e-07 | 5 |
thyroid diverticulum | 5.08e-07 | 5 |
pharyngeal pouch 2 | 5.08e-07 | 5 |
thyroid primordium | 5.08e-07 | 5 |