FFCP PHASE1:Hg19::chr12:9917526..9917543,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:9917526..9917543,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr12:9917526..9917543,+ | |description=CAGE_peak_at_chr12:9917526..9917543,+ | ||
|id=chr12:9917526..9917543,+ | |id=chr12:9917526..9917543,+ | ||
|ontology_enrichment_celltype=CL:0000738!7.91e-55!140;CL:0000037!5.25e-53!172;CL:0000566!5.25e-53!172;CL:0002087!6.08e-49!119;CL:0000988!1.29e-48!182;CL:0002031!9.35e-48!124;CL:0002032!8.50e-47!165;CL:0000837!8.50e-47!165;CL:0000542!1.43e-44!53;CL:0000051!1.43e-44!53;CL:0000838!1.37e-43!52;CL:0000945!2.49e-23!24;CL:0000826!2.49e-23!24;CL:0000084!9.01e-17!25;CL:0000827!9.01e-17!25;CL:0002057!8.32e-16!42;CL:0000236!1.11e-14!14;CL:0000134!1.66e-14!358;CL:0000860!2.93e-14!45;CL:0002320!9.34e-14!365;CL:0000766!1.08e-13!76;CL:0000791!2.24e-13!18;CL:0000789!2.24e-13!18;CL:0002420!2.24e-13!18;CL:0002419!2.24e-13!18;CL:0000790!2.24e-13!18;CL:0000763!4.28e-12!112;CL:0000049!4.28e-12!112;CL:0000839!9.15e-12!70;CL:0000219!3.74e-11!390;CL:0000624!1.18e-10!6;CL:0000557!1.15e-09!71;CL:0000034!5.07e-09!444;CL:0002194!8.40e-09!63;CL:0000576!8.40e-09!63;CL:0000040!8.40e-09!63;CL:0000559!8.40e-09!63;CL:0000048!1.52e-08!430;CL:0002009!2.47e-08!65;CL:0000723!4.04e-08!436 | |ontology_enrichment_celltype=CL:0000738!7.91e-55!140;CL:0000037!5.25e-53!172;CL:0000566!5.25e-53!172;CL:0002087!6.08e-49!119;CL:0000988!1.29e-48!182;CL:0002031!9.35e-48!124;CL:0002032!8.50e-47!165;CL:0000837!8.50e-47!165;CL:0000542!1.43e-44!53;CL:0000051!1.43e-44!53;CL:0000838!1.37e-43!52;CL:0000945!2.49e-23!24;CL:0000826!2.49e-23!24;CL:0000084!9.01e-17!25;CL:0000827!9.01e-17!25;CL:0002057!8.32e-16!42;CL:0000236!1.11e-14!14;CL:0000134!1.66e-14!358;CL:0000860!2.93e-14!45;CL:0002320!9.34e-14!365;CL:0000766!1.08e-13!76;CL:0000791!2.24e-13!18;CL:0000789!2.24e-13!18;CL:0002420!2.24e-13!18;CL:0002419!2.24e-13!18;CL:0000790!2.24e-13!18;CL:0000763!4.28e-12!112;CL:0000049!4.28e-12!112;CL:0000839!9.15e-12!70;CL:0000219!3.74e-11!390;CL:0000624!1.18e-10!6;CL:0000557!1.15e-09!71;CL:0000034!5.07e-09!444;CL:0002194!8.40e-09!63;CL:0000576!8.40e-09!63;CL:0000040!8.40e-09!63;CL:0000559!8.40e-09!63;CL:0000048!1.52e-08!430;CL:0002009!2.47e-08!65;CL:0000723!4.04e-08!436 | ||
|ontology_enrichment_celltype_v019=CL:0000624;1.41e-21;6!CL:0000791;7.51e-19;18!CL:0000789;7.51e-19;18!CL:0002419;7.51e-19;18!CL:0000542;2.53e-18;53!CL:0000084;8.21e-16;25!CL:0000623;6.46e-13;3!CL:0000767;1.39e-12;3!CL:0000898;5.19e-11;3!CL:0002087;2.76e-10;104!CL:0000236;5.85e-10;13!CL:0000945;1.45e-08;24!CL:0000094;4.30e-08;8!CL:0000815;9.53e-08;2!CL:0000792;9.53e-08;2!CL:0002677;9.53e-08;2!CL:0000738;3.25e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.09e-32,136;CL:0000838,2.37e-29,52;CL:0000037,4.69e-29,168;CL:0000542,1.09e-28,53;CL:0000051,1.09e-28,53;CL:0000988,4.37e-27,177;CL:0002087,1.05e-26,115;CL:0002032,1.18e-25,161;CL:0000837,1.18e-25,161;CL:0002031,3.80e-25,120;CL:0000624,9.46e-22,6;CL:0000791,6.37e-19,18;CL:0000789,6.37e-19,18;CL:0002420,6.37e-19,18;CL:0002419,6.37e-19,18;CL:0000790,6.37e-19,18;CL:0000084,7.74e-16,25;CL:0000827,7.74e-16,25;CL:0000623,6.47e-13,3;CL:0000825,6.47e-13,3;CL:0000767,1.34e-12,3;CL:0000898,3.58e-11,3;CL:0000236,3.29e-09,14;CL:0000134,9.81e-09,354;CL:0000945,1.65e-08,24;CL:0000826,1.65e-08,24;CL:0002320,2.20e-08,361;CL:0000893,4.04e-08,2;CL:0002489,4.04e-08,2;CL:0000809,4.04e-08,2;CL:0000808,4.04e-08,2;CL:0000894,4.04e-08,2;CL:0000806,4.04e-08,2;CL:0000807,4.04e-08,2;CL:0000805,4.04e-08,2;CL:0002425,4.04e-08,2;CL:0000094,4.27e-08,8;CL:0000815,6.23e-08,2;CL:0000792,6.23e-08,2;CL:0002677,6.23e-08,2;CL:0000766,7.12e-08,72;CL:0000219,3.74e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000790;7.51e-19;18!CL:0000051;2.53e-18;53!CL:0002425;3.37e-08;2 | |||
|ontology_enrichment_disease=DOID:2531!1.00e-07!51;DOID:0060083!1.00e-07!51;DOID:0060058!1.47e-07!10 | |ontology_enrichment_disease=DOID:2531!1.00e-07!51;DOID:0060083!1.00e-07!51;DOID:0060058!1.47e-07!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.95e-13!102;UBERON:0003061!4.95e-13!102;UBERON:0002384!9.67e-13!375;UBERON:0002193!1.36e-11!112;UBERON:0002371!2.52e-09!80;UBERON:0002405!1.28e-08!115;UBERON:0001474!3.89e-08!86;UBERON:0004177!3.91e-07!7 | |ontology_enrichment_uberon=UBERON:0002390!4.95e-13!102;UBERON:0003061!4.95e-13!102;UBERON:0002384!9.67e-13!375;UBERON:0002193!1.36e-11!112;UBERON:0002371!2.52e-09!80;UBERON:0002405!1.28e-08!115;UBERON:0001474!3.89e-08!86;UBERON:0004177!3.91e-07!7 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.61e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06978768047132,0.738905305049512,0.787107813136792,8.26064981382698,7.67658796194425,4.79929982279836,0,0,0,0.154934401160603,0.853015394924529,2.64240395401362,3.32397245119126,2.00544447470142,3.25516306073778,0,0,0,0,0.377875943688809,0,0,0,0,0.575384784644301,0.512321413058201,4.96612682766029,0,0,0,0.188242339542605,0,0.224723484445085,0.612167784741805,0.320929027076094,2.55734850319616,0,0.199463657621632,0.426224750532694,0.290209238628584,0,1.24564449799115,1.7587406567972,0.521482918420201,3.9093992046921,0.605399502633369,0.368277635987565,3.16462387440884,0,0,0.209658645508376,0.336985893439485,0,0.16072558669708,0,0,0,1.75996244461323,0,0.889509253863555,4.26730222566507,0.800791974072025,2.29900975981793,0.661044872784862,0,17.0763890732835,7.6340834618222,4.58727873750275,2.64342657158052,3.92355994087075,0.790152254325231,5.70458333330116,3.53709686474248,6.99045096598331,0.167186495390678,1.95553359980154,3.31413464014313,3.89653456815823,1.44833593950726,1.47302953737419,1.10766947291811,1.08321545506006,0.25618263945135,0.520237390239513,1.47994114143309,2.48715016007264,1.15921234294021,1.4828656316206,0.267540828089713,1.04535523804977,0.906474741580529,2.29932296161153,1.71813722741315,2.53019692019503,0.318565414324097,0,0,0.301150238155546,0.511946444617674,0,0,0,8.87069670188823,5.88368430723716,4.63438092424957,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24396869324463,1.15295962733569,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12961773587702,15.1713685355484,14.8783026653067,19.5081415145218,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,3.8828556147351,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.784306353074702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0.185803175125719,0.28853842595289,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0.313359791546046,0,0,0,0,0.425846237690326,0.687010689511529,0,0,0,2.54004524022652,1.11362469558097,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0.533937062838473,0,0,0,0.197611631897944,1.09613338542806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.535928260312357,0,0,0,0,0.258355639344024,0.682821857254437,0,0.0636471582781649,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06978768047132,0.738905305049512,0.787107813136792,8.26064981382698,7.67658796194425,4.79929982279836,0,0,0,0.154934401160603,0.853015394924529,2.64240395401362,3.32397245119126,2.00544447470142,3.25516306073778,0,0,0,0,0.377875943688809,0,0,0,0,0.575384784644301,0.512321413058201,4.96612682766029,0,0,0,0.188242339542605,0,0.224723484445085,0.612167784741805,0.320929027076094,2.55734850319616,0,0.199463657621632,0.426224750532694,0.290209238628584,0,1.24564449799115,1.7587406567972,0.521482918420201,3.9093992046921,0.605399502633369,0.368277635987565,3.16462387440884,0,0,0.209658645508376,0.336985893439485,0,0.16072558669708,0,0,0,1.75996244461323,0,0.889509253863555,4.26730222566507,0.800791974072025,2.29900975981793,0.661044872784862,0,17.0763890732835,7.6340834618222,4.58727873750275,2.64342657158052,3.92355994087075,0.790152254325231,5.70458333330116,3.53709686474248,6.99045096598331,0.167186495390678,1.95553359980154,3.31413464014313,3.89653456815823,1.44833593950726,1.47302953737419,1.10766947291811,1.08321545506006,0.25618263945135,0.520237390239513,1.47994114143309,2.48715016007264,1.15921234294021,1.4828656316206,0.267540828089713,1.04535523804977,0.906474741580529,2.29932296161153,1.71813722741315,2.53019692019503,0.318565414324097,0,0,0.301150238155546,0.511946444617674,0,0,0,8.87069670188823,5.88368430723716,4.63438092424957,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24396869324463,1.15295962733569,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12961773587702,15.1713685355484,14.8783026653067,19.5081415145218,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,3.8828556147351,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.784306353074702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0.185803175125719,0.28853842595289,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0.313359791546046,0,0,0,0,0.425846237690326,0.687010689511529,0,0,0,2.54004524022652,1.11362469558097,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0,0,0,0,0.533937062838473,0,0,0,0.197611631897944,1.09613338542806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.535928260312357,0,0,0,0,0.258355639344024,0.682821857254437,0,0.0636471582781649,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:9917526..9917543,+ | |short_description=p@chr12:9917526..9917543,+ | ||
}} | }} |
Latest revision as of 14:05, 24 July 2015
Short description: | p@chr12:9917526..9917543, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:9917526..9917543, + |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.61e-08 | 371 |