FFCP PHASE1:Hg19::chr13:24289325..24289337,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:24289325..24289337,+ | |||
|coexpression_cluster_id=C194 | |coexpression_cluster_id=C194 | ||
|description=CAGE_peak_at_chr13:24289325..24289337,+ | |description=CAGE_peak_at_chr13:24289325..24289337,+ | ||
|id=chr13:24289325..24289337,+ | |id=chr13:24289325..24289337,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009847;6.96e-14;3!UBERON:0003353;6.96e-14;3!UBERON:0008425;8.21e-11;1 | |||
|ontology_enrichment_disease=DOID:305!1.08e-17!106;DOID:0050687!1.09e-14!143;DOID:162!1.83e-13!235;DOID:14566!7.96e-13!239;DOID:3119!5.56e-11!14;DOID:299!7.91e-11!25;DOID:7!5.59e-10!39;DOID:5093!8.66e-09!4;DOID:1612!8.66e-09!4 | |ontology_enrichment_disease=DOID:305!1.08e-17!106;DOID:0050687!1.09e-14!143;DOID:162!1.83e-13!235;DOID:14566!7.96e-13!239;DOID:3119!5.56e-11!14;DOID:299!7.91e-11!25;DOID:7!5.59e-10!39;DOID:5093!8.66e-09!4;DOID:1612!8.66e-09!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;3.71e-39;4!DOID:1612;3.71e-39;4!DOID:299;2.69e-18;25!DOID:1325;6.88e-13;7!DOID:3904;6.88e-13;7!DOID:3119;4.82e-11;14!DOID:5409;1.05e-10;4!DOID:305;9.50e-09;106 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.71e-39,4;DOID:1612,3.71e-39,4;DOID:299,2.62e-18,25;DOID:305,1.69e-15,106;DOID:1325,7.16e-13,7;DOID:3904,7.16e-13,7;DOID:3119,4.51e-11,14;DOID:0050687,6.73e-11,143;DOID:5409,1.05e-10,4;DOID:0050686,1.31e-09,137;DOID:162,8.47e-08,235;DOID:14566,1.40e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0002619!2.27e-13!22;UBERON:0001950!7.67e-13!20;UBERON:0000956!2.39e-11!25;UBERON:0000203!2.39e-11!25;UBERON:0001893!5.00e-11!34;UBERON:0001869!9.95e-11!32;UBERON:0002791!5.20e-10!33;UBERON:0002020!1.63e-08!34;UBERON:0003528!1.63e-08!34;UBERON:0002780!2.15e-08!41;UBERON:0001890!2.15e-08!41;UBERON:0006240!2.15e-08!41;UBERON:0003080!4.31e-08!42;UBERON:0000200!3.92e-07!6 | |ontology_enrichment_uberon=UBERON:0002619!2.27e-13!22;UBERON:0001950!7.67e-13!20;UBERON:0000956!2.39e-11!25;UBERON:0000203!2.39e-11!25;UBERON:0001893!5.00e-11!34;UBERON:0001869!9.95e-11!32;UBERON:0002791!5.20e-10!33;UBERON:0002020!1.63e-08!34;UBERON:0003528!1.63e-08!34;UBERON:0002780!2.15e-08!41;UBERON:0001890!2.15e-08!41;UBERON:0006240!2.15e-08!41;UBERON:0003080!4.31e-08!42;UBERON:0000200!3.92e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;7.46e-16;10!UBERON:0001443;1.96e-14;11!UBERON:0004913;5.84e-11;1!UBERON:0003703;5.84e-11;1!UBERON:0001174;5.84e-11;1!UBERON:0004914;5.84e-11;1!UBERON:0001052;2.99e-10;4!UBERON:0004907;2.24e-08;5!UBERON:0000915;7.64e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,7.46e-16,10;UBERON:0001443,1.96e-14,11;UBERON:0004913,6.14e-11,1;UBERON:0003703,6.14e-11,1;UBERON:0001174,6.14e-11,1;UBERON:0004914,6.14e-11,1;UBERON:0001052,2.60e-10,4;UBERON:0005153,6.81e-09,37;UBERON:0004907,2.00e-08,5;UBERON:0000915,2.18e-08,52;UBERON:0001046,3.14e-08,19;UBERON:0005157,6.66e-07,47 | |||
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| ||
|short_description=p@chr13:24289325..24289337,+ | |short_description=p@chr13:24289325..24289337,+ | ||
}} | }} |
Latest revision as of 15:09, 24 July 2015
Short description: | p@chr13:24289325..24289337, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:24289325..24289337, + |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
breast | 7.46e-16 | 10 |
chest | 1.96e-14 | 11 |
hepatopancreatic ampulla | 6.14e-11 | 1 |
extrahepatic bile duct | 6.14e-11 | 1 |
common bile duct | 6.14e-11 | 1 |
duodenal papilla | 6.14e-11 | 1 |
rectum | 2.60e-10 | 4 |
epithelial bud | 6.81e-09 | 37 |
lower digestive tract | 2.00e-08 | 5 |
thoracic segment of trunk | 2.18e-08 | 52 |
hindgut | 3.14e-08 | 19 |
epithelial fold | 6.66e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.71e-39 | 4 |
breast cancer | 3.71e-39 | 4 |
adenocarcinoma | 2.62e-18 | 25 |
carcinoma | 1.69e-15 | 106 |
bronchus cancer | 7.16e-13 | 7 |
bronchogenic carcinoma | 7.16e-13 | 7 |
gastrointestinal system cancer | 4.51e-11 | 14 |
cell type cancer | 6.73e-11 | 143 |
lung small cell carcinoma | 1.05e-10 | 4 |
organ system cancer | 1.31e-09 | 137 |
cancer | 8.47e-08 | 235 |
disease of cellular proliferation | 1.40e-07 | 239 |