FFCP PHASE1:Hg19::chr13:41584575..41584587,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:41584575..41584587,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr13:41584575..41584587,- | |description=CAGE_peak_at_chr13:41584575..41584587,- | ||
|id=chr13:41584575..41584587,- | |id=chr13:41584575..41584587,- | ||
|ontology_enrichment_celltype=CL:0000037!1.91e-39!172;CL:0000566!1.91e-39!172;CL:0000738!2.36e-36!140;CL:0000988!2.73e-36!182;CL:0002032!1.20e-34!165;CL:0000837!1.20e-34!165;CL:0002087!1.01e-29!119;CL:0002031!1.00e-26!124;CL:0000763!1.46e-21!112;CL:0000049!1.46e-21!112;CL:0000766!6.41e-19!76;CL:0002009!1.32e-15!65;CL:0002194!3.07e-15!63;CL:0000576!3.07e-15!63;CL:0000040!3.07e-15!63;CL:0000559!3.07e-15!63;CL:0000839!4.30e-15!70;CL:0000557!6.78e-15!71;CL:0002057!7.21e-15!42;CL:0000860!4.04e-14!45;CL:0000542!5.32e-12!53;CL:0000051!5.32e-12!53;CL:0000838!2.82e-11!52;CL:0000134!8.11e-11!358;CL:0002320!4.89e-10!365;CL:0002393!1.38e-09!9;CL:0002397!1.38e-09!9;CL:0000219!7.96e-09!390;CL:0000945!9.58e-07!24;CL:0000826!9.58e-07!24 | |ontology_enrichment_celltype=CL:0000037!1.91e-39!172;CL:0000566!1.91e-39!172;CL:0000738!2.36e-36!140;CL:0000988!2.73e-36!182;CL:0002032!1.20e-34!165;CL:0000837!1.20e-34!165;CL:0002087!1.01e-29!119;CL:0002031!1.00e-26!124;CL:0000763!1.46e-21!112;CL:0000049!1.46e-21!112;CL:0000766!6.41e-19!76;CL:0002009!1.32e-15!65;CL:0002194!3.07e-15!63;CL:0000576!3.07e-15!63;CL:0000040!3.07e-15!63;CL:0000559!3.07e-15!63;CL:0000839!4.30e-15!70;CL:0000557!6.78e-15!71;CL:0002057!7.21e-15!42;CL:0000860!4.04e-14!45;CL:0000542!5.32e-12!53;CL:0000051!5.32e-12!53;CL:0000838!2.82e-11!52;CL:0000134!8.11e-11!358;CL:0002320!4.89e-10!365;CL:0002393!1.38e-09!9;CL:0002397!1.38e-09!9;CL:0000219!7.96e-09!390;CL:0000945!9.58e-07!24;CL:0000826!9.58e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0002393;7.83e-26;6!CL:0002397;7.83e-26;6!CL:0000775;3.68e-23;3!CL:0000094;2.00e-19;8!CL:0000081;2.57e-14;11!CL:0000771;9.46e-10;2!CL:0000226;9.37e-07;3!CL:0000842;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.29e-23,3;CL:0000094,1.88e-19,8;CL:0002393,1.92e-17,9;CL:0002397,1.92e-17,9;CL:0000081,2.46e-14,11;CL:0000771,9.46e-10,2;CL:0000766,4.46e-08,72;CL:0000738,3.30e-07,136;CL:0000226,8.15e-07,3;CL:0000842,8.15e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.12e-17;1!UBERON:0003056;9.37e-07;3 | |||
|ontology_enrichment_disease=DOID:2531!1.04e-08!51;DOID:0060083!1.04e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.02e-15!102;UBERON:0003061!1.02e-15!102;UBERON:0002193!1.40e-13!112;UBERON:0002371!9.43e-13!80;UBERON:0001474!1.92e-12!86;UBERON:0002384!1.01e-09!375;UBERON:0002405!1.54e-09!115;UBERON:0004765!1.02e-08!101;UBERON:0001434!1.02e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.12e-17;1!UBERON:0001785;1.12e-17;1!UBERON:0002464;1.12e-17;1!UBERON:0004904;1.12e-17;1!UBERON:0001021;1.12e-17;1!UBERON:0003714;1.64e-09;2!UBERON:0005162;1.64e-09;2!UBERON:0000122;1.64e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,8.72e-18,1;UBERON:0001785,8.72e-18,1;UBERON:0002464,8.72e-18,1;UBERON:0004904,8.72e-18,1;UBERON:0001021,8.72e-18,1;UBERON:0003902,8.72e-18,1;UBERON:0005425,8.72e-18,1;UBERON:0003714,1.44e-09,2;UBERON:0005162,1.44e-09,2;UBERON:0000122,1.44e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0.246301768349837,0.157421562627358,0,0.383829398097213,0.77408061658038,0,0,0,0.232401601740905,0.284338464974843,0.587200878669695,4.9859586767869,2.20598892217156,4.99125002646459,0,0,0,0.145398238779565,0.377875943688809,0,0.232429036905685,0.411167888021826,0.619412741790207,0.28769239232215,0.256160706529101,0.945928919554341,0.689491361473237,0.645484683583826,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0.398927315243264,0,0.580418477257168,0,0,0.251248665256743,0,0,0,0.736555271975129,0,0.422510572623884,0.212604299965044,0.209658645508376,0.44931452458598,0.450530678524519,0.32145117339416,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,1.1384259382189,0.587237189370939,0,0,1.12101712596307,0.263384084775077,0.196709770113833,0.393010762749165,0.411202997999018,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0,0.260118695119756,0.164437904603676,0.276350017785848,0.289803085735052,0,0,1.04535523804977,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0,0.579297615531196,0,0,0,0.722878304769133,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0.324547393654683,0.174129737299267,0.398873881556595,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0.441463099414651,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.594524649154913,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0.224170287987055,0.394061520403854,0.431255149719035,0.898401253958239,0,0,0,0,0,2.24702107184155,2.99161459204025,0.828831026872071,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.82707210449155,1.72571360654893,0.426910231213777,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0.165018999841176,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0.648473311192717,0.540031437238115,0,0,0,0,0.557409525377156,0.144269212976445,0.142283686696828,0.159426272728822,0.199579371432817,0,0,0,0.280797178113459,0.456469358066384,0,0,0.338583555603207,0.1605880751037,0,0,0.343505344755765,0.307240764308458,0.223676107892416,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0.211125408127993,0,0,0.251932747854276,0.102268682502155,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0.498635045700469,0,0.19606253431774,0,0.189753732724185,0.317873157960757,0,0.163232808159148,0.565412285735763,0,0,0,0,0,0.123563938946503,0,0,0,0,0.182454789215666,0,0,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0.288109595976299,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.157566364614447,0,0.0674035438541849,0,0.169346664131569,0,0,0,0,0,0,0.77380195455795,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0.327872630709804,0.157054096250234,0,0,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0.159633859057151,0,0,0,0,1.42769420259154,0.196295437002051,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0.785720083444267,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.230467975111559,0,0.0679697329768317,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0.354996002191696,0.0852134047591577,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0.198950775161368,0,0.11294608203896,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0.0999411559249289,0,0.352894871715692,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|short_description=p@chr13:41584575..41584587,- | |short_description=p@chr13:41584575..41584587,- | ||
}} | }} |
Latest revision as of 15:59, 24 July 2015
Short description: | p@chr13:41584575..41584587, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:41584575..41584587, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.29e-23 | 3 |
granulocyte | 1.88e-19 | 8 |
intermediate monocyte | 1.92e-17 | 9 |
CD14-positive, CD16-positive monocyte | 1.92e-17 | 9 |
blood cell | 2.46e-14 | 11 |
eosinophil | 9.46e-10 | 2 |
myeloid leukocyte | 4.46e-08 | 72 |
leukocyte | 3.30e-07 | 136 |
single nucleate cell | 8.15e-07 | 3 |
mononuclear cell | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 8.72e-18 | 1 |
cranial nerve | 8.72e-18 | 1 |
nerve trunk | 8.72e-18 | 1 |
nerve connecting eye with brain | 8.72e-18 | 1 |
nerve | 8.72e-18 | 1 |
retinal neural layer | 8.72e-18 | 1 |
presumptive neural retina | 8.72e-18 | 1 |
neural tissue | 1.44e-09 | 2 |
multi cell component structure | 1.44e-09 | 2 |
neuron projection bundle | 1.44e-09 | 2 |