FFCP PHASE1:Hg19::chr13:45781332..45781345,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:45781332..45781345,+ | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_at_chr13:45781332..45781345,+ | |||
|id=chr13:45781332..45781345,+ | |||
|ontology_enrichment_celltype=CL:0002166!1.45e-08!3;CL:0002621!4.13e-08!3;CL:0002605!1.78e-07!3;CL:0000220!3.57e-07!246;CL:0002321!4.93e-07!248;CL:0000243!7.57e-07!15;CL:0000125!7.57e-07!15;CL:0000030!7.57e-07!15;CL:0000339!7.57e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002166;7.70e-34;3!CL:0002621;1.60e-09;3!CL:0002159;4.66e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,7.70e-34,3;CL:0002621,1.67e-09,3;CL:0002159,4.66e-08,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.60e-09;3!DOID:127;1.60e-09;3!DOID:0060072;1.86e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.81e-09,3;DOID:127,1.81e-09,3;DOID:0060072,2.04e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000153!1.01e-08!129;UBERON:0007811!1.01e-08!129;UBERON:0001949!4.13e-08!3;UBERON:0000033!4.21e-08!123;UBERON:0000924!9.52e-08!173;UBERON:0006601!9.52e-08!173;UBERON:0004121!1.60e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.13e-50;2!UBERON:0002757;2.13e-50;2!UBERON:0010134;2.13e-50;2!UBERON:0005408;2.13e-50;2!UBERON:0001899;2.13e-50;2!UBERON:0003296;8.13e-26;4!UBERON:0010133;8.13e-26;4!UBERON:0002784;8.13e-26;4!UBERON:0001708;1.11e-25;4!UBERON:0008895;1.11e-25;4!UBERON:0011159;8.98e-21;5!UBERON:0001894;3.17e-15;7!UBERON:0011137;5.29e-10;11!UBERON:0010323;5.29e-10;11!UBERON:0001949;1.60e-09;3!UBERON:0000075;3.66e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.88e-50,2;UBERON:0002757,1.88e-50,2;UBERON:0010134,1.88e-50,2;UBERON:0005408,1.88e-50,2;UBERON:0001899,1.88e-50,2;UBERON:0003296,7.64e-26,4;UBERON:0010133,7.64e-26,4;UBERON:0002784,7.64e-26,4;UBERON:0001708,1.11e-25,4;UBERON:0008895,1.11e-25,4;UBERON:0011159,8.98e-21,5;UBERON:0010188,1.71e-17,6;UBERON:0002539,1.71e-17,6;UBERON:0008816,1.71e-17,6;UBERON:0001894,3.06e-15,7;UBERON:0006222,3.06e-15,7;UBERON:0010323,5.29e-10,11;UBERON:0001949,1.67e-09,3;UBERON:0011137,4.66e-08,14;UBERON:0000075,3.66e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0.684372125364421,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0.355009592516614,0,0,0.57978255948989,1.36373060295417,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.277765335475589,0,0,0,0.231860809950154,0,0.288732895522148,0,0,0,0,0,0,0,1.87467667973554,3.02367830757947,0.850650583454319,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,0.579125226670317,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0.330569830721956,0,0.382838137483752,0,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.890894042497916,0,0,0.140669416410513,0,0,0,0,0,0,56.3500440586873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0.139423744278603,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0.458320848023367,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0.714695326373367,0,0,1.08599920350743,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0.215649622793364,0,0,0,0,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383287282918786,3.74991285114801,2.69026977775059,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:45781332..45781345,+ | |||
}} |
Latest revision as of 16:15, 24 July 2015
Short description: | p@chr13:45781332..45781345, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:45781332..45781345, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 7.70e-34 | 3 |
gingival epithelial cell | 1.67e-09 | 3 |
general ecto-epithelial cell | 4.66e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.88e-50 | 2 |
regional part of epithalamus | 1.88e-50 | 2 |
secretory circumventricular organ | 1.88e-50 | 2 |
circumventricular organ | 1.88e-50 | 2 |
epithalamus | 1.88e-50 | 2 |
gland of diencephalon | 7.64e-26 | 4 |
neuroendocrine gland | 7.64e-26 | 4 |
regional part of diencephalon | 7.64e-26 | 4 |
jaw skeleton | 1.11e-25 | 4 |
splanchnocranium | 1.11e-25 | 4 |
primary subdivision of cranial skeletal system | 8.98e-21 | 5 |
protuberance | 1.71e-17 | 6 |
pharyngeal arch | 1.71e-17 | 6 |
embryonic head | 1.71e-17 | 6 |
diencephalon | 3.06e-15 | 7 |
future diencephalon | 3.06e-15 | 7 |
cranial skeletal system | 5.29e-10 | 11 |
gingival epithelium | 1.67e-09 | 3 |
axial skeletal system | 4.66e-08 | 14 |
subdivision of skeletal system | 3.66e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.81e-09 | 3 |
leiomyoma | 1.81e-09 | 3 |
benign neoplasm | 2.04e-07 | 4 |