FFCP PHASE1:Hg19::chr13:98628637..98628650,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:98628637..98628650,- | |||
|description=CAGE_peak_at_chr13:98628637..98628650,- | |description=CAGE_peak_at_chr13:98628637..98628650,- | ||
|id=chr13:98628637..98628650,- | |id=chr13:98628637..98628650,- | ||
|ontology_enrichment_celltype=CL:0000860!2.03e-14!45;CL:0002057!5.99e-14!42;CL:0002087!7.19e-13!119;CL:0002031!2.71e-12!124;CL:0000738!1.08e-11!140;CL:0000988!7.27e-09!182;CL:0000839!2.69e-08!70;CL:0002194!5.10e-08!63;CL:0000576!5.10e-08!63;CL:0000040!5.10e-08!63;CL:0000559!5.10e-08!63;CL:0000557!5.35e-08!71;CL:0000037!7.42e-08!172;CL:0000566!7.42e-08!172;CL:0002032!1.44e-07!165;CL:0000837!1.44e-07!165;CL:0002009!2.06e-07!65;CL:0000766!2.50e-07!76 | |ontology_enrichment_celltype=CL:0000860!2.03e-14!45;CL:0002057!5.99e-14!42;CL:0002087!7.19e-13!119;CL:0002031!2.71e-12!124;CL:0000738!1.08e-11!140;CL:0000988!7.27e-09!182;CL:0000839!2.69e-08!70;CL:0002194!5.10e-08!63;CL:0000576!5.10e-08!63;CL:0000040!5.10e-08!63;CL:0000559!5.10e-08!63;CL:0000557!5.35e-08!71;CL:0000037!7.42e-08!172;CL:0000566!7.42e-08!172;CL:0002032!1.44e-07!165;CL:0000837!1.44e-07!165;CL:0002009!2.06e-07!65;CL:0000766!2.50e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.15e-18;33!CL:0002057;2.15e-18;33!CL:0000473;6.39e-13;39!CL:0000234;6.39e-13;39!CL:0000576;1.17e-12;48!CL:0000766;2.50e-12;69!CL:0000097;7.47e-10;5!CL:0002087;2.61e-09;104!CL:0002393;1.18e-08;6!CL:0002397;1.18e-08;6!CL:0000623;1.74e-07;3 | |ontology_enrichment_celltype_v019=CL:0000860;2.15e-18;33!CL:0002057;2.15e-18;33!CL:0000473;6.39e-13;39!CL:0000234;6.39e-13;39!CL:0000576;1.17e-12;48!CL:0000766;2.50e-12;69!CL:0000097;7.47e-10;5!CL:0002087;2.61e-09;104!CL:0002393;1.18e-08;6!CL:0002397;1.18e-08;6!CL:0000623;1.74e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.13e-24,42;CL:0002057,1.13e-24,42;CL:0000473,3.61e-21,48;CL:0000234,3.61e-21,48;CL:0000839,4.36e-21,66;CL:0002031,6.59e-21,120;CL:0000557,1.02e-20,67;CL:0000738,1.80e-19,136;CL:0000766,5.14e-19,72;CL:0002087,4.18e-18,115;CL:0002194,2.89e-16,59;CL:0000576,2.89e-16,59;CL:0000040,2.89e-16,59;CL:0000559,2.89e-16,59;CL:0002009,1.24e-15,61;CL:0000988,5.67e-15,177;CL:0000037,1.08e-14,168;CL:0002032,3.33e-14,161;CL:0000837,3.33e-14,161;CL:0000763,2.14e-11,108;CL:0000049,2.14e-11,108;CL:0000097,7.38e-10,5;CL:0002028,7.38e-10,5;CL:0000623,1.58e-07,3;CL:0000825,1.58e-07,3;CL:0000134,2.80e-07,354;CL:0002320,5.18e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;5.14e-16;42 | |ontology_enrichment_development_v019=CL:0002057;5.14e-16;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.37e-08!80;UBERON:0001474!9.25e-08!86;UBERON:0002390!1.64e-07!102;UBERON:0003061!1.64e-07!102;UBERON:0002193!5.34e-07!112 | |ontology_enrichment_uberon=UBERON:0002371!6.37e-08!80;UBERON:0001474!9.25e-08!86;UBERON:0002390!1.64e-07!102;UBERON:0003061!1.64e-07!102;UBERON:0002193!5.34e-07!112 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.17e-18,76;UBERON:0002390,2.65e-16,98;UBERON:0003061,2.65e-16,98;UBERON:0001474,3.13e-16,82;UBERON:0004765,1.91e-14,90;UBERON:0002193,2.16e-14,108;UBERON:0002405,7.42e-14,93;UBERON:0001434,1.29e-12,100;UBERON:0003081,2.84e-07,203;UBERON:0002204,6.83e-07,167 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.522371256399677,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0,0.626909442956176,0,0,0.251085279189606,0.152826811495903,0,0.157421562627358,0,0,0.928896739896456,0,0,0,0.0774672005803016,0,0.587200878669695,2.76997704265939,4.01088894940283,4.55722828503289,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0.464858073811369,0,0.619412741790207,0.28769239232215,0.256160706529101,1.41889337933151,2.75796544589295,1.93645405075148,5.41705946377367,0.752969358170419,0.272906150057846,0,3.36692281607993,1.28371610830437,0.639337125799041,0,0,1.27867425159808,2.32167390902867,1.70215567407342,4.35975574296902,0.502497330513487,0.521482918420201,0.65156653411535,0,2.94622108790052,2.21523671208619,0.211255286311942,0,0.419317291016752,0.22465726229299,0,0,0,0.39783335439818,0.547992461293902,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0.574752439954483,0,0.954053754535364,1.1384259382189,0,0.382273228125229,0,2.24203425192614,0,0,0.786021525498329,0.822405995998037,0.334372990781356,1.95553359980154,0.946895611469467,1.94826728407911,0.111410456885174,0.294605907474837,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0.289803085735052,0.593146252648242,0,2.09071047609954,0.113309342697566,0.383220493601921,1.03088233644789,1.01207876807801,1.59282707162048,0,1.90090408889675,1.05402583354441,0.383959833463255,0,0.236777252044017,0,0.403213486449465,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0.529636723252875,0.286836620748814,0,0,0,0,0,0.269421344139376,0.490385709340376,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0.204154171254893,0.122834317311768,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0,0,0.358779271377724,0,0,0.900273288253207,0.206105058476878,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.201504196455281,0.169560592310488,0.193260853163297,0,0,0.243947412259191,0.265059536642971,0,0,0,0.36497735907583,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0.474541238222193,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0.301586917234893,0,0,1.03993478527958,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,1.86595303986695,2.16179930125442,2.01987893482208,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0.43596006883328,0,0,3.57656445851882,0,0,0,0.257207374262142,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.112085143993527,1.37921532141349,1.50939302401662,0.898401253958239,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,2.0694614258501,0,0,0,0,0.686286847621712,0,1.07857100409308,0.74709290462411,0.303127571446259,1.66435439510497,0,0,0.306923946576125,0,0,0,0,0,0.154209693802656,0.355123450626254,0,0,0.116210378459959,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0.62962469366128,0,0,0,0.869932992075073,0,0,0,0,0,0.255897791311334,0,0.636406495851874,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0.141405431953713,1.13008116620243,0.551365343546124,0,0.876901770507525,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0.35667105148125,0,0,0,0.75894634753143,0,0,0,1.08890984861323,0.0941438007767792,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0.228234679033192,0.313359791546046,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.331737779793674,0.295547618953547,0.219385397153973,0.10893846351899,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0.0884575645033392,0,1.18608451472249,0,0.208843899010911,0.269604531922708,0,0,0,0.19566461893209,0,0.394584402849391,0,0,0,0.450970258243478,0.207376382794494,0,0,0.313932918407225,0,0,0.138674673013139,0,0,0,0,0,0.0967563312890851,0.146178634172371,0.164230914106418,0,0,0,0,0,0.253243183823515,0.391102765469606,0,0,0,0.144090417154106,0.229073192331831,0.171594997861965,0.288109595976299,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164831716762333,0,0.196854963029498,0.169346664131569,0,0,0,0,0,0,0,0.242998226632099,0,0,0.0524545881349981,0,0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| ||
|short_description=p@chr13:98628637..98628650,- | |short_description=p@chr13:98628637..98628650,- | ||
}} | }} |
Latest revision as of 17:37, 24 July 2015
Short description: | p@chr13:98628637..98628650, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:98628637..98628650, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.13e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-24 | 42 |
defensive cell | 3.61e-21 | 48 |
phagocyte | 3.61e-21 | 48 |
myeloid lineage restricted progenitor cell | 4.36e-21 | 66 |
hematopoietic lineage restricted progenitor cell | 6.59e-21 | 120 |
granulocyte monocyte progenitor cell | 1.02e-20 | 67 |
leukocyte | 1.80e-19 | 136 |
myeloid leukocyte | 5.14e-19 | 72 |
nongranular leukocyte | 4.18e-18 | 115 |
monopoietic cell | 2.89e-16 | 59 |
monocyte | 2.89e-16 | 59 |
monoblast | 2.89e-16 | 59 |
promonocyte | 2.89e-16 | 59 |
macrophage dendritic cell progenitor | 1.24e-15 | 61 |
hematopoietic cell | 5.67e-15 | 177 |
hematopoietic stem cell | 1.08e-14 | 168 |
hematopoietic oligopotent progenitor cell | 3.33e-14 | 161 |
hematopoietic multipotent progenitor cell | 3.33e-14 | 161 |
myeloid cell | 2.14e-11 | 108 |
common myeloid progenitor | 2.14e-11 | 108 |
mast cell | 7.38e-10 | 5 |
basophil mast progenitor cell | 7.38e-10 | 5 |
natural killer cell | 1.58e-07 | 3 |
pro-NK cell | 1.58e-07 | 3 |
mesenchymal cell | 2.80e-07 | 354 |
connective tissue cell | 5.18e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.17e-18 | 76 |
hematopoietic system | 2.65e-16 | 98 |
blood island | 2.65e-16 | 98 |
bone element | 3.13e-16 | 82 |
skeletal element | 1.91e-14 | 90 |
hemolymphoid system | 2.16e-14 | 108 |
immune system | 7.42e-14 | 93 |
skeletal system | 1.29e-12 | 100 |
lateral plate mesoderm | 2.84e-07 | 203 |
musculoskeletal system | 6.83e-07 | 167 |