FFCP PHASE1:Hg19::chr13:99973553..99973566,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:99973553..99973566,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr13:99973553..99973566,+ | |description=CAGE_peak_at_chr13:99973553..99973566,+ | ||
|id=chr13:99973553..99973566,+ | |id=chr13:99973553..99973566,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.25e-69!42;CL:0000860!2.14e-64!45;CL:0000738!3.62e-53!140;CL:0000557!8.31e-48!71;CL:0000766!2.11e-47!76;CL:0002009!5.00e-47!65;CL:0002031!1.09e-46!124;CL:0002087!1.98e-44!119;CL:0000839!9.01e-43!70;CL:0002194!1.18e-42!63;CL:0000576!1.18e-42!63;CL:0000040!1.18e-42!63;CL:0000559!1.18e-42!63;CL:0000037!5.55e-41!172;CL:0000566!5.55e-41!172;CL:0002032!1.39e-39!165;CL:0000837!1.39e-39!165;CL:0000988!4.78e-38!182;CL:0000763!6.10e-35!112;CL:0000049!6.10e-35!112;CL:0000134!8.47e-15!358;CL:0002320!2.87e-14!365;CL:0000624!1.66e-13!6;CL:0000219!2.10e-12!390;CL:0002393!2.27e-12!9;CL:0002397!2.27e-12!9;CL:0000791!3.29e-12!18;CL:0000789!3.29e-12!18;CL:0002420!3.29e-12!18;CL:0002419!3.29e-12!18;CL:0000790!3.29e-12!18;CL:0000767!2.82e-11!3;CL:0000048!3.50e-10!430;CL:0000623!3.71e-10!3;CL:0000825!3.71e-10!3;CL:0000723!7.24e-10!436;CL:0000034!1.84e-09!444;CL:0000084!2.54e-08!25;CL:0000827!2.54e-08!25;CL:0001014!2.60e-07!2;CL:0001016!2.60e-07!2 | |ontology_enrichment_celltype=CL:0002057!1.25e-69!42;CL:0000860!2.14e-64!45;CL:0000738!3.62e-53!140;CL:0000557!8.31e-48!71;CL:0000766!2.11e-47!76;CL:0002009!5.00e-47!65;CL:0002031!1.09e-46!124;CL:0002087!1.98e-44!119;CL:0000839!9.01e-43!70;CL:0002194!1.18e-42!63;CL:0000576!1.18e-42!63;CL:0000040!1.18e-42!63;CL:0000559!1.18e-42!63;CL:0000037!5.55e-41!172;CL:0000566!5.55e-41!172;CL:0002032!1.39e-39!165;CL:0000837!1.39e-39!165;CL:0000988!4.78e-38!182;CL:0000763!6.10e-35!112;CL:0000049!6.10e-35!112;CL:0000134!8.47e-15!358;CL:0002320!2.87e-14!365;CL:0000624!1.66e-13!6;CL:0000219!2.10e-12!390;CL:0002393!2.27e-12!9;CL:0002397!2.27e-12!9;CL:0000791!3.29e-12!18;CL:0000789!3.29e-12!18;CL:0002420!3.29e-12!18;CL:0002419!3.29e-12!18;CL:0000790!3.29e-12!18;CL:0000767!2.82e-11!3;CL:0000048!3.50e-10!430;CL:0000623!3.71e-10!3;CL:0000825!3.71e-10!3;CL:0000723!7.24e-10!436;CL:0000034!1.84e-09!444;CL:0000084!2.54e-08!25;CL:0000827!2.54e-08!25;CL:0001014!2.60e-07!2;CL:0001016!2.60e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000767;2.22e-38;3!CL:0000860;6.27e-21;33!CL:0002057;6.27e-21;33!CL:0000473;1.96e-16;39!CL:0000234;1.96e-16;39!CL:0000576;6.86e-16;48!CL:0000766;7.09e-16;69!CL:0000094;7.81e-15;8!CL:0000895;1.04e-13;1!CL:0000081;5.99e-11;11!CL:0002393;2.45e-09;6!CL:0002397;2.45e-09;6!CL:0000763;2.47e-09;100!CL:0001014;1.70e-07;2!CL:0001016;1.70e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,1.43e-38,3;CL:0000860,2.35e-28,42;CL:0002057,2.35e-28,42;CL:0000766,2.75e-27,72;CL:0000473,1.12e-24,48;CL:0000234,1.12e-24,48;CL:0002009,7.06e-23,61;CL:0000763,9.14e-21,108;CL:0000049,9.14e-21,108;CL:0000557,9.53e-21,67;CL:0002194,1.60e-19,59;CL:0000576,1.60e-19,59;CL:0000040,1.60e-19,59;CL:0000559,1.60e-19,59;CL:0000738,9.84e-19,136;CL:0000839,2.31e-17,66;CL:0002032,1.41e-15,161;CL:0000837,1.41e-15,161;CL:0000094,6.64e-15,8;CL:0000037,7.38e-15,168;CL:0000988,5.11e-14,177;CL:0000810,1.83e-13,1;CL:0000895,1.83e-13,1;CL:0002436,1.83e-13,1;CL:0002427,1.83e-13,1;CL:0002428,1.83e-13,1;CL:0002429,1.83e-13,1;CL:0002433,1.83e-13,1;CL:0002431,1.83e-13,1;CL:0002432,1.83e-13,1;CL:0002031,2.88e-13,120;CL:0002087,1.39e-11,115;CL:0000081,5.33e-11,11;CL:0001014,1.64e-07,2;CL:0001016,1.64e-07,2;CL:0000893,2.25e-07,2;CL:0002489,2.25e-07,2;CL:0000809,2.25e-07,2;CL:0000808,2.25e-07,2;CL:0000894,2.25e-07,2;CL:0000806,2.25e-07,2;CL:0000807,2.25e-07,2;CL:0000805,2.25e-07,2;CL:0002425,2.25e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.21e-24;42!CL:0002427;1.04e-13;1!CL:0000049;4.52e-08;108!CL:0002425;1.70e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.37e-44!80;UBERON:0001474!3.27e-40!86;UBERON:0002390!8.25e-39!102;UBERON:0003061!8.25e-39!102;UBERON:0002193!1.88e-34!112;UBERON:0004765!7.44e-33!101;UBERON:0001434!7.44e-33!101;UBERON:0002405!1.27e-29!115;UBERON:0002204!3.42e-16!167;UBERON:0003081!5.34e-14!216;UBERON:0002384!1.51e-13!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.59e-18,76;UBERON:0002405,1.67e-17,93;UBERON:0001474,9.20e-17,82;UBERON:0002390,1.51e-16,98;UBERON:0003061,1.51e-16,98;UBERON:0004765,3.59e-15,90;UBERON:0002193,6.80e-15,108;UBERON:0001434,1.55e-13,100;UBERON:0002204,1.43e-07,167;UBERON:0003081,3.16e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,1.91914699048606,2.01260960310899,0,0,0,0,0,0,0,0.802177789880567,2.38711957787437,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,1.39457422143411,0,0.309706370895104,0.575384784644301,0.256160706529101,0.47296445977717,1.72372840368309,0,2.70852973188684,0.188242339542605,0,0.224723484445085,0.306083892370903,0,1.27867425159808,0,0,0.852449501065388,0.290209238628584,1.13477044938228,0.622822248995575,0.502497330513487,1.5644487552606,0.434377689410233,0,0.368277635987565,1.58231193720442,0,1.4882300997553,0.838634582033504,1.79725809834392,0.901061357049038,0.32145117339416,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0.786021525498329,0.822405995998037,0,0,0.473447805734733,0,0,0.589211814949674,0,0.541607727530031,0,0,0,0,0,0.444859689486181,0.802622484269139,0,0,1.14966148080576,1.37450978193052,0.759059076058509,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.862510299438069,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,1.91914699048606,2.01260960310899,0,0,0,0,0,0,0,0.802177789880567,2.38711957787437,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,1.39457422143411,0,0.309706370895104,0.575384784644301,0.256160706529101,0.47296445977717,1.72372840368309,0,2.70852973188684,0.188242339542605,0,0.224723484445085,0.306083892370903,0,1.27867425159808,0,0,0.852449501065388,0.290209238628584,1.13477044938228,0.622822248995575,0.502497330513487,1.5644487552606,0.434377689410233,0,0.368277635987565,1.58231193720442,0,1.4882300997553,0.838634582033504,1.79725809834392,0.901061357049038,0.32145117339416,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0.786021525498329,0.822405995998037,0,0,0.473447805734733,0,0,0.589211814949674,0,0.541607727530031,0,0,0,0,0,0.444859689486181,0.802622484269139,0,0,1.14966148080576,1.37450978193052,0.759059076058509,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.862510299438069,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:99973553..99973566,+ | |short_description=p@chr13:99973553..99973566,+ | ||
}} | }} |
Latest revision as of 17:46, 24 July 2015
Short description: | p@chr13:99973553..99973566, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:99973553..99973566, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.59e-18 | 76 |
immune system | 1.67e-17 | 93 |
bone element | 9.20e-17 | 82 |
hematopoietic system | 1.51e-16 | 98 |
blood island | 1.51e-16 | 98 |
skeletal element | 3.59e-15 | 90 |
hemolymphoid system | 6.80e-15 | 108 |
skeletal system | 1.55e-13 | 100 |
musculoskeletal system | 1.43e-07 | 167 |
lateral plate mesoderm | 3.16e-07 | 203 |