FFCP PHASE1:Hg19::chr14:35873421..35873434,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:35873421..35873434,+ | |||
|description=CAGE_peak_at_chr14:35873421..35873434,+ | |||
|id=chr14:35873421..35873434,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.46e-16!140;CL:0002057!1.62e-15!42;CL:0000766!2.96e-15!76;CL:0000860!7.77e-15!45;CL:0002031!2.43e-13!124;CL:0002087!8.83e-13!119;CL:0000557!1.70e-12!71;CL:0000839!5.36e-12!70;CL:0002009!1.41e-10!65;CL:0002194!1.73e-10!63;CL:0000576!1.73e-10!63;CL:0000040!1.73e-10!63;CL:0000559!1.73e-10!63;CL:0000037!1.70e-08!172;CL:0000566!1.70e-08!172;CL:0002032!2.98e-08!165;CL:0000837!2.98e-08!165;CL:0000988!1.56e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.15e-15;3!CL:0000766;2.52e-15;69!CL:0000623;1.63e-14;3!CL:0000860;2.06e-11;33!CL:0002057;2.06e-11;33!CL:0000094;6.20e-10;8!CL:0000576;2.78e-09;48!CL:0000097;6.13e-09;5!CL:0002393;8.56e-08;6!CL:0002397;8.56e-08;6!CL:0000473;1.01e-07;39!CL:0000234;1.01e-07;39!CL:0000081;3.14e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.44e-23,136;CL:0000766,4.39e-23,72;CL:0000860,1.88e-18,42;CL:0002057,1.88e-18,42;CL:0000037,7.98e-18,168;CL:0002031,8.48e-18,120;CL:0002032,2.49e-17,161;CL:0000837,2.49e-17,161;CL:0000988,1.39e-16,177;CL:0000839,6.37e-16,66;CL:0000473,9.27e-16,48;CL:0000234,9.27e-16,48;CL:0000775,1.08e-15,3;CL:0000557,1.24e-15,67;CL:0002087,1.54e-15,115;CL:0000623,2.12e-14,3;CL:0000825,2.12e-14,3;CL:0000763,7.64e-14,108;CL:0000049,7.64e-14,108;CL:0002194,5.34e-12,59;CL:0000576,5.34e-12,59;CL:0000040,5.34e-12,59;CL:0000559,5.34e-12,59;CL:0002009,1.63e-11,61;CL:0000094,7.49e-10,8;CL:0002393,8.69e-09,9;CL:0002397,8.69e-09,9;CL:0000097,9.01e-09,5;CL:0002028,9.01e-09,5;CL:0000081,3.59e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.71e-11!115;UBERON:0002193!7.29e-11!112;UBERON:0002390!3.82e-10!102;UBERON:0003061!3.82e-10!102;UBERON:0002371!3.01e-09!80;UBERON:0001474!6.34e-09!86;UBERON:0004765!1.56e-07!101;UBERON:0001434!1.56e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.35e-13,76;UBERON:0002390,1.81e-12,98;UBERON:0003061,1.81e-12,98;UBERON:0001474,4.08e-12,82;UBERON:0002193,6.20e-11,108;UBERON:0004765,1.02e-10,90;UBERON:0002405,2.93e-10,93;UBERON:0001434,2.72e-09,100 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0.783556884599516,0,1.39560233594486,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0,0,0.0821005894499457,0,0.393364276848904,0.383829398097213,1.08371286321253,0,0.30120591877825,0,0.154934401160603,0.142169232487422,0,1.66198622559563,4.01088894940283,5.859293509328,0.447830948479849,0.32389366601898,0.257575567634187,0.436194716338694,1.13362783106643,0,0.697287110717054,1.23350366406548,0.619412741790207,0.28769239232215,1.0246428261164,0,0.689491361473237,0.645484683583826,1.35426486594342,1.88242339542605,0,0.224723484445085,0.918251677112708,0,0.639337125799041,0,0.398927315243264,0.426224750532694,0.870627715885752,0,1.24564449799115,0.251248665256743,0.521482918420201,0,1.81619850790011,1.47311054395026,0.316462387440884,0.211255286311942,0.850417199860174,0.419317291016752,1.46027220490444,1.65194582125657,0.803627933485401,1.71007646244749,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,1.76171156811282,0.382273228125229,0,0,0,0,0.786021525498329,1.23360899399706,0,0.32592226663359,0.946895611469467,0,0.111410456885174,0.589211814949674,0,0,0.128091319725675,0.260118695119756,0,0.276350017785848,0,0,0.267540828089713,0,0,0.383220493601921,0,0,0.637130828648193,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,1.00803371612366,1.87208137048455,1.01377082717959,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0.419499436209906,0,0.208994966536811,0,0,0.33472061276467,0,0,0.732186172644509,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0.151357427644931,0,0,0,0.570471821544449,0,0.23486899728753,0.647491777472526,0,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0.30648779579902,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0.121973706129595,0.265059536642971,0.232387885739037,0.207322110030741,0.756962552626885,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0,0.738155454624648,0,0,0,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.231860809950154,0,0.288732895522148,0.462985512576611,0.380508304469197,1.58040879591855,0.858486162094873,0,0,0,0,0,0,0,0,0.766765358330422,0.492663237895943,0.176096868026452,1.03664057770386,3.60299883542404,1.2624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0.179060963239896,0,1.18218456121156,1.2937654491571,2.95188983443421,0,0,0,0,0,3.74503511973591,5.9832291840805,9.11714129559278,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,0,0.413536052245775,3.01999881146064,0.960548020230999,0.303127571446259,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0,0,0.232420756919918,0,0,0,0,0,0,0.451199612907412,0,0,0,0.316654886678627,1.13733384070897,0,0.431831832204279,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0.183138929636687,0.165018999841176,0,0.650060246036521,0,0.096670718292122,0.462145851343933,0,0,0,0,0.340906509664404,0.0890320356467374,0,0,0.127612712494584,0.2023155617111,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0,0,0.540031437238115,0,0.320472213382419,0,0,0,0,0.213425530045242,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0.307160702099232,0,0.281338832821026,0,0,0,0.398495976502139,0.552567831062295,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,7.18449277040819,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.341380344856499,0,0.236387681767936,0,0.291604613383254,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0.438770794307945,0.10893846351899,0.139423744278603,0.0769502585037971,0,0,0,0.108647371922008,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.269604531922708,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.52418000472609,0,0.0967563312890851,0,0.0821154570532092,0.193978032976839,0,0.225980740780532,0,0.596143835108969,0,0,0,0.426905989478705,0,0,0.114536596165916,0,0,0,0,0,0,0,0,1.20084057741958,0.136905378891993,0,0,0.525774708558629,0.279282401272254,0.229160424011684,0.717873024576814,0,0.429226048136571,0,0.335917362433631,0,0,0.630265458457789,0.576911008668165,0.404421263125109,0,0.0846733320657845,0,0.136203406111576,0.160753148465019,0.137539436597234,0.415440338029185,0.674921674654501,0,0,0.335434687599266,0.630445658393585,0.629455057619977,0.1056003365194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| |||
|short_description=p@chr14:35873421..35873434,+ | |||
}} |
Latest revision as of 20:26, 24 July 2015
Short description: | p@chr14:35873421..35873434, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:35873421..35873434, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.44e-23 | 136 |
myeloid leukocyte | 4.39e-23 | 72 |
classical monocyte | 1.88e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.88e-18 | 42 |
hematopoietic stem cell | 7.98e-18 | 168 |
hematopoietic lineage restricted progenitor cell | 8.48e-18 | 120 |
hematopoietic oligopotent progenitor cell | 2.49e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.49e-17 | 161 |
hematopoietic cell | 1.39e-16 | 177 |
myeloid lineage restricted progenitor cell | 6.37e-16 | 66 |
defensive cell | 9.27e-16 | 48 |
phagocyte | 9.27e-16 | 48 |
neutrophil | 1.08e-15 | 3 |
granulocyte monocyte progenitor cell | 1.24e-15 | 67 |
nongranular leukocyte | 1.54e-15 | 115 |
natural killer cell | 2.12e-14 | 3 |
pro-NK cell | 2.12e-14 | 3 |
myeloid cell | 7.64e-14 | 108 |
common myeloid progenitor | 7.64e-14 | 108 |
monopoietic cell | 5.34e-12 | 59 |
monocyte | 5.34e-12 | 59 |
monoblast | 5.34e-12 | 59 |
promonocyte | 5.34e-12 | 59 |
macrophage dendritic cell progenitor | 1.63e-11 | 61 |
granulocyte | 7.49e-10 | 8 |
intermediate monocyte | 8.69e-09 | 9 |
CD14-positive, CD16-positive monocyte | 8.69e-09 | 9 |
mast cell | 9.01e-09 | 5 |
basophil mast progenitor cell | 9.01e-09 | 5 |
blood cell | 3.59e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.35e-13 | 76 |
hematopoietic system | 1.81e-12 | 98 |
blood island | 1.81e-12 | 98 |
bone element | 4.08e-12 | 82 |
hemolymphoid system | 6.20e-11 | 108 |
skeletal element | 1.02e-10 | 90 |
immune system | 2.93e-10 | 93 |
skeletal system | 2.72e-09 | 100 |