FFCP PHASE1:Hg19::chr14:74816536..74816574,-: Difference between revisions
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|id=chr14:74816536..74816574,-
|short_description=p@chr14:74816536..74816574,-
|description=CAGE_peak_at_chr14:74816536..74816574,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:74816536..74816574,- | |||
|coexpression_cluster_id=C114 | |||
|description=CAGE_peak_at_chr14:74816536..74816574,- | |||
|id=chr14:74816536..74816574,- | |||
|ontology_enrichment_celltype=CL:0002322!1.39e-40!5;CL:0000540!2.47e-12!6;CL:0000031!2.47e-12!6;CL:0000404!2.47e-12!6;CL:0000039!4.79e-11!7;CL:0000586!4.79e-11!7;CL:0000047!2.20e-09!8;CL:0002563!4.16e-09!4;CL:0000148!6.92e-08!10;CL:0000541!6.92e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.30e-33;5!CL:0002321;1.85e-11;15!CL:0000039;2.83e-11;7!CL:0000586;2.83e-11;7!CL:0002253;2.37e-10;2!CL:0000148;3.62e-08;10!CL:0002231;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.86e-33,5;CL:0000039,3.30e-11,7;CL:0000586,3.30e-11,7;CL:0002253,2.49e-10,2;CL:0000148,3.37e-08,10;CL:0000541,3.37e-08,10;CL:0002231,2.32e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.62e-08;10!UBERON:0005564;3.62e-08;10 | |||
|ontology_enrichment_disease=DOID:3095!8.92e-13!22;DOID:2994!8.92e-13!22;DOID:3371!8.68e-10!1;DOID:4549!8.68e-10!1;DOID:5861!8.68e-10!1;DOID:6496!8.68e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:3371;2.47e-19;1!DOID:4549;2.47e-19;1!DOID:5861;2.47e-19;1!DOID:6496;2.47e-19;1!DOID:3095;4.66e-08;22!DOID:2994;4.66e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.08e-19,1;DOID:4549,1.08e-19,1;DOID:5861,1.08e-19,1;DOID:6496,1.08e-19,1;DOID:3095,5.01e-08,22;DOID:2994,5.01e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0003135!3.32e-18!11;UBERON:0003101!8.37e-13!22;UBERON:0000079!8.37e-13!22;UBERON:0006947!1.36e-11!3;UBERON:0004054!1.36e-11!3;UBERON:0000473!9.96e-10!8;UBERON:0001000!1.56e-09!1;UBERON:0005352!1.56e-09!1;UBERON:0002171!3.53e-09!1;UBERON:0006518!3.53e-09!1;UBERON:0008949!3.53e-09!1;UBERON:0000101!3.53e-09!1;UBERON:0002167!3.53e-09!1;UBERON:0001301!4.15e-09!1;UBERON:0001242!4.16e-09!4;UBERON:0001262!4.16e-09!4;UBERON:0004786!4.16e-09!4;UBERON:0004808!4.16e-09!4;UBERON:0001277!4.16e-09!4;UBERON:0002372!5.72e-09!1;UBERON:0001961!5.72e-09!1;UBERON:0001744!5.72e-09!1;UBERON:0001735!5.72e-09!1;UBERON:0005904!6.47e-09!4;UBERON:0003350!1.88e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;2.47e-19;1!UBERON:0005352;2.47e-19;1!UBERON:0003135;2.20e-15;11!UBERON:0003101;1.87e-13;22!UBERON:0000079;1.87e-13;22!UBERON:0000473;5.54e-10;8!UBERON:0002418;2.55e-07;3!UBERON:0004755;2.55e-07;3!UBERON:0006947;2.55e-07;3!UBERON:0004054;2.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,3.91e-19,1;UBERON:0005352,3.91e-19,1;UBERON:0003135,2.88e-15,11;UBERON:0003101,2.13e-13,22;UBERON:0000079,2.13e-13,22;UBERON:0000473,6.34e-10,8;UBERON:0002418,1.93e-07,3;UBERON:0004755,1.93e-07,3;UBERON:0006947,2.97e-07,3;UBERON:0004054,2.97e-07,3 | |||
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|short_description=p@chr14:74816536..74816574,- | |||
}} | }} |
Latest revision as of 22:40, 24 July 2015
Short description: | p@chr14:74816536..74816574, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:74816536..74816574, - |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.86e-33 | 5 |
germ line cell | 3.30e-11 | 7 |
germ cell | 3.30e-11 | 7 |
epithelial cell of large intestine | 2.49e-10 | 2 |
melanocyte | 3.37e-08 | 10 |
melanoblast | 3.37e-08 | 10 |
epithelial cell of prostate | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 3.91e-19 | 1 |
spermatic cord | 3.91e-19 | 1 |
male reproductive organ | 2.88e-15 | 11 |
male organism | 2.13e-13 | 22 |
male reproductive system | 2.13e-13 | 22 |
testis | 6.34e-10 | 8 |
cartilage tissue | 1.93e-07 | 3 |
skeletal tissue | 1.93e-07 | 3 |
male genital duct | 2.97e-07 | 3 |
internal male genitalia | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.08e-19 | 1 |
extraosseous chondrosarcoma | 1.08e-19 | 1 |
myxoid chondrosarcoma | 1.08e-19 | 1 |
extraskeletal myxoid chondrosarcoma | 1.08e-19 | 1 |
germ cell and embryonal cancer | 5.01e-08 | 22 |
germ cell cancer | 5.01e-08 | 22 |