FFCP PHASE1:Hg19::chr15:50086217..50086255,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:50086217..50086255,+ to FFCP PHASE1:Hg19::chr15:50086217..50086255,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-187bp_to_ENST00000558657_5end | |||
|cluster_id=chr15:50086217..50086255,+ | |||
|coexpression_cluster_id=C364 | |||
|description=CAGE_peak_1_at_ENST00000558657_5end | |||
|id=chr15:50086217..50086255,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.51e-31!42;CL:0000860!8.12e-30!45;CL:0000557!1.19e-27!71;CL:0000839!7.80e-27!70;CL:0000766!1.04e-26!76;CL:0002009!3.02e-24!65;CL:0002194!9.73e-23!63;CL:0000576!9.73e-23!63;CL:0000040!9.73e-23!63;CL:0000559!9.73e-23!63;CL:0000738!2.37e-22!140;CL:0000763!3.97e-21!112;CL:0000049!3.97e-21!112;CL:0002031!2.42e-20!124;CL:0000037!2.96e-18!172;CL:0000566!2.96e-18!172;CL:0002032!2.76e-17!165;CL:0000837!2.76e-17!165;CL:0000988!7.99e-16!182;CL:0002087!1.50e-15!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.42e-39;33!CL:0002057;3.42e-39;33!CL:0000473;7.18e-31;39!CL:0000234;7.18e-31;39!CL:0000576;4.62e-23;48!CL:0000766;6.14e-18;69!CL:0000763;3.18e-10;100!CL:0000738;3.93e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.13e-44,42;CL:0002057,5.13e-44,42;CL:0000473,7.97e-43,48;CL:0000234,7.97e-43,48;CL:0000557,3.41e-37,67;CL:0000766,1.11e-36,72;CL:0000839,5.82e-36,66;CL:0002009,2.37e-33,61;CL:0000763,1.63e-32,108;CL:0000049,1.63e-32,108;CL:0002194,4.63e-31,59;CL:0000576,4.63e-31,59;CL:0000040,4.63e-31,59;CL:0000559,4.63e-31,59;CL:0000738,1.69e-26,136;CL:0000037,4.15e-24,168;CL:0002031,1.02e-23,120;CL:0002032,1.69e-23,161;CL:0000837,1.69e-23,161;CL:0000988,1.09e-21,177;CL:0002087,4.91e-17,115;CL:0000134,1.45e-07,354;CL:0002320,5.29e-07,361;CL:0000034,8.50e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.26e-31;42!CL:0000049;6.21e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.59e-25!80;UBERON:0001474!3.02e-21!86;UBERON:0002390!5.25e-18!102;UBERON:0003061!5.25e-18!102;UBERON:0004765!1.57e-17!101;UBERON:0001434!1.57e-17!101;UBERON:0002193!6.54e-15!112;UBERON:0002405!3.44e-13!115;UBERON:0002204!3.21e-09!167;UBERON:0001737!1.78e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.04e-10;9!UBERON:0001557;1.04e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.96e-33,76;UBERON:0001474,1.08e-29,82;UBERON:0004765,5.15e-28,90;UBERON:0002405,3.01e-26,93;UBERON:0001434,1.95e-23,100;UBERON:0002390,4.96e-23,98;UBERON:0003061,4.96e-23,98;UBERON:0002193,3.48e-20,108;UBERON:0002204,9.27e-13,167;UBERON:0001737,1.20e-10,9;UBERON:0003081,7.79e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01347264011988,1.46062018077475,1.95173119516203,0,0,0,0,0,0.125542639594803,0,0,0.0787107813136792,2.75354993794233,1.53531759238885,5.41856431606266,0.919421224478927,0,0,0,0,2.05520307534393,0.553995408531877,0.601633342410425,0,0,0,0.257575567634187,5.23433659606433,6.80176698639857,7.27752183563449,6.97287110717054,9.86802931252382,13.0076675775944,6.32923263108731,11.7833925003386,9.22280696565482,7.58440497620561,10.3277549373412,6.77132432971709,4.89430082810772,8.18718450173537,10.1125568000288,7.65209730927256,10.269728866435,5.11469700639233,4.94776950280074,10.7710375115681,9.80316926225197,9.57690487474327,14.1846306172785,13.0792672289071,13.3161792586074,16.1659704710262,12.1625753034865,6.05399502633369,16.940771255428,13.607882659958,3.80259515361495,4.25208599930087,2.93522103711726,2.47122988522289,5.70672192797724,6.10757229448904,1.14005097496499,4.17725022118089,3.47061892152804,1.75996244461323,0.546138611262131,1.77901850772711,0.426730222566507,2.00197993518006,1.14950487990897,0.661044872784862,0.954053754535364,0,0,0,1.32171328579026,4.48406850385229,2.10707267820062,0,0,0,3.17654341242288,1.62961133316795,0.946895611469467,1.94826728407911,2.67385096524417,4.12448270464772,5.09527957542329,5.41607727530031,2.0494611156108,1.43065282315866,1.47994114143309,0.829050053357545,2.60822777161547,3.70716407905151,7.75868401460168,3.1360657141493,2.71942422474159,1.91610246800961,2.06176467289578,4.55435445635105,0.95569624297229,1.30216690771284,0.950452044448374,2.86092726247768,2.55973222308837,0,0.947109008176067,1.64225599384209,0,0,0,0,0,1.66221330396589,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0.324547393654683,0,0.132957960518865,0,2.28797964312051,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.673588117878509,0,0,0,0,9.22462922052443,3.87780264148325,0,0,0.12663051166458,2.38336525463794,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,2.19409231913646,0,0.252433774244115,0.0920498986422993,2.42469085228218,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0.116193942869518,0,2.52320850875628,2.55484151353081,0,0,0,0,0.721879481669586,4.25904480143438,4.21461725195254,5.06123162755312,3.19852520923942,3.4860711054785,4.74541238222193,2.29213223872279,4.31687223275761,5.38646019724947,0,0,0,0,0,0,0,0,0.245976877086227,1.88724591328378,0,0,0,0,0,0,0,1.39116485970092,4.10930429825376,0,0,1.52203321787679,0,0,0,0,0,0,2.51973192298289,3.26082723657489,0,0,0,0.492663237895943,2.28925928434388,5.1832028885193,6.19715799692934,5.30218220390796,2.92090313743978,0,0,0,0.102827492703324,1.8020583470635,4.57322292208925,0,0,0.07333828582095,0.129271715757778,0,0.845302752556,0,1.04007436911366,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,1.2162378064119,2.51128545716063,12.6500363689819,0,0,4.27910715122155,0,0,0,0,0,0,0,0,0,0,0,2.55175500661265,0,0,0,0,0,0.271265023699736,1.87173775377726,2.3195768543631,1.41932173530541,2.22568688486155,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0.248107807818777,2.91577749247319,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0.182091168006717,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63111851975121,2.61435451024901,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,3.82838137483752,0,0,0,0,0,0,0,0,0.286249773483982,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9676842561399,0.202910376962704,0,0,3.01163839628508,2.65272410735427,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0.144269212976445,0,0,0,0.383010740264733,0,4.22008522356922,0,0,0,5.01268954180134,2.87796022262726,0,0,0,0,0,0,0.166849141711909,0,0,0,2.97501246323581,0,0,0,0.146508179271894,0,0,0,1.43246690842614,1.78178808499583,0,13.9180670687282,0,0,0,0,0,0,0.251932747854276,0,0,0.311039587661807,0.0898683511473268,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0.344743373241465,0,0,8.85741385813839,0,9.15490417902499,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0.0897576444097721,0.108647371922008,2.23300811812344,2.65633020865401,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0.586993856796269,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0.171986032471617,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0.19871461170299,0.126621591911757,0.391102765469606,0,0,0,0,0,0,0,0.124252535565433,0.235694034616795,0,0,0,0.288950589901519,7.80546375322726,0,1.27746588066972,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,10.3379859675209,0,1.60753148465019,1.2378549293751,2.07720169014593,8.54900787895702,8.51182150013745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,2.5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| ||
|short_description=p1@ENST00000558657 | |||
}} | }} |
Latest revision as of 02:14, 25 July 2015
Short description: | p1@ENST00000558657 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000558657_5end |
Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
Association with transcript: | -187bp_to_ENST00000558657_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.13e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.13e-44 | 42 |
defensive cell | 7.97e-43 | 48 |
phagocyte | 7.97e-43 | 48 |
granulocyte monocyte progenitor cell | 3.41e-37 | 67 |
myeloid leukocyte | 1.11e-36 | 72 |
myeloid lineage restricted progenitor cell | 5.82e-36 | 66 |
macrophage dendritic cell progenitor | 2.37e-33 | 61 |
myeloid cell | 1.63e-32 | 108 |
common myeloid progenitor | 1.63e-32 | 108 |
monopoietic cell | 4.63e-31 | 59 |
monocyte | 4.63e-31 | 59 |
monoblast | 4.63e-31 | 59 |
promonocyte | 4.63e-31 | 59 |
leukocyte | 1.69e-26 | 136 |
hematopoietic stem cell | 4.15e-24 | 168 |
hematopoietic lineage restricted progenitor cell | 1.02e-23 | 120 |
hematopoietic oligopotent progenitor cell | 1.69e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.69e-23 | 161 |
hematopoietic cell | 1.09e-21 | 177 |
nongranular leukocyte | 4.91e-17 | 115 |
mesenchymal cell | 1.45e-07 | 354 |
connective tissue cell | 5.29e-07 | 361 |
stem cell | 8.50e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.96e-33 | 76 |
bone element | 1.08e-29 | 82 |
skeletal element | 5.15e-28 | 90 |
immune system | 3.01e-26 | 93 |
skeletal system | 1.95e-23 | 100 |
hematopoietic system | 4.96e-23 | 98 |
blood island | 4.96e-23 | 98 |
hemolymphoid system | 3.48e-20 | 108 |
musculoskeletal system | 9.27e-13 | 167 |
larynx | 1.20e-10 | 9 |
lateral plate mesoderm | 7.79e-08 | 203 |