FFCP PHASE1:Hg19::chr15:62007379..62007390,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000559590_5end | |association_with_transcript=-9bp_to_ENST00000559590_5end | ||
|cluster_id=chr15:62007379..62007390,- | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_1_at_ENST00000559590_5end | |description=CAGE_peak_1_at_ENST00000559590_5end | ||
|id=chr15:62007379..62007390,- | |id=chr15:62007379..62007390,- | ||
|ontology_enrichment_celltype=CL:0002552!5.00e-11!5;CL:0000167!3.57e-07!1;CL:0000164!3.57e-07!1;CL:0000502!3.57e-07!1;CL:0000172!3.57e-07!1;CL:0000173!3.57e-07!1;CL:0002351!3.57e-07!1 | |ontology_enrichment_celltype=CL:0002552!5.00e-11!5;CL:0000167!3.57e-07!1;CL:0000164!3.57e-07!1;CL:0000502!3.57e-07!1;CL:0000172!3.57e-07!1;CL:0000173!3.57e-07!1;CL:0002351!3.57e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002552;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,6.04e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!2.36e-07!1;DOID:1357!2.36e-07!1;DOID:4430!3.57e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.33e-29;1!DOID:1357;1.33e-29;1!DOID:5409;1.70e-08;4!DOID:0050615;3.97e-08;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.33e-29,1;DOID:1357,1.33e-29,1;DOID:5409,1.70e-08,4;DOID:0050615,3.97e-08,16 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001896;1.64e-38;3!UBERON:0005290;1.64e-38;3!UBERON:0001764;1.33e-29;1!UBERON:0001825;1.33e-29;1!UBERON:0002298;7.48e-20;6!UBERON:0004733;1.90e-10;12!UBERON:0002028;1.90e-10;12!UBERON:0004732;1.02e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,1.80e-38,3;UBERON:0005290,1.80e-38,3;UBERON:0010096,1.80e-38,3;UBERON:0001764,1.33e-29,1;UBERON:0001825,1.33e-29,1;UBERON:0002298,7.84e-20,6;UBERON:0004733,1.94e-10,12;UBERON:0002028,1.94e-10,12;UBERON:0007277,1.94e-10,12;UBERON:0004732,1.04e-09,13;UBERON:0003076,1.53e-08,15;UBERON:0003057,1.53e-08,15 | |||
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|short_description=p1@ENST00000559590 | |short_description=p1@ENST00000559590 | ||
}} | }} |
Latest revision as of 03:07, 25 July 2015
Short description: | p1@ENST00000559590 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000559590_5end |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | -9bp_to_ENST00000559590_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 1.80e-38 | 3 |
myelencephalon | 1.80e-38 | 3 |
future myelencephalon | 1.80e-38 | 3 |
maxillary sinus | 1.33e-29 | 1 |
paranasal sinus | 1.33e-29 | 1 |
brainstem | 7.84e-20 | 6 |
segmental subdivision of hindbrain | 1.94e-10 | 12 |
hindbrain | 1.94e-10 | 12 |
presumptive hindbrain | 1.94e-10 | 12 |
segmental subdivision of nervous system | 1.04e-09 | 13 |
posterior neural tube | 1.53e-08 | 15 |
chordal neural plate | 1.53e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.33e-29 | 1 |
maxillary sinus cancer | 1.33e-29 | 1 |
lung small cell carcinoma | 1.70e-08 | 4 |
respiratory system cancer | 3.97e-08 | 16 |