FFCP PHASE1:Hg19::chr15:71147072..71147098,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:71147072..71147098,- | |||
|description=CAGE_peak_at_chr15:71147072..71147098,- | |description=CAGE_peak_at_chr15:71147072..71147098,- | ||
|id=chr15:71147072..71147098,- | |id=chr15:71147072..71147098,- | ||
|ontology_enrichment_celltype=CL:0002595;1.86e-14;5!CL:0002379;4.70e-09;1!CL:0000359;1.65e-07;32 | |ontology_enrichment_celltype=CL:0000187!7.81e-10!54;CL:0000359!1.54e-09!32;CL:0000192!5.92e-09!42;CL:0000514!5.92e-09!42;CL:0000680!7.26e-09!57;CL:0000056!7.26e-09!57;CL:0000355!7.26e-09!57;CL:0000393!1.16e-08!60;CL:0000211!1.16e-08!60;CL:0000183!2.78e-08!59;CL:0000055!2.58e-07!180 | ||
| | |ontology_enrichment_celltype_v019=CL:0002595;1.86e-14;5!CL:0002379;4.70e-09;1!CL:0000359;1.65e-07;32 | ||
|ontology_enrichment_disease=DOID:3620;4.70e-09;1!DOID:3565;4.70e-09;1 | |ontology_enrichment_celltype_v019_2=CL:0002595,1.00e-14,5;CL:0002379,6.72e-09,1;CL:0000359,3.01e-08,32 | ||
|ontology_enrichment_uberon=UBERON:0003834;1.86e-14;5!UBERON:0001533;1.86e-14;5!UBERON:0003513;1.76e-10;7!UBERON:0002038;1.60e-09;1!UBERON:0009661;1.60e-09;1!UBERON:0002950;1.60e-09;1!UBERON:0001891;1.60e-09;1!UBERON:0002336;4.70e-09;1!UBERON:0011215;4.70e-09;1!UBERON:0001018;4.70e-09;1!UBERON:0002473;4.70e-09;1!UBERON:0005340;4.70e-09;1!UBERON:0003544;4.70e-09;1!UBERON:0005970;4.70e-09;1!UBERON:0002316;4.70e-09;1!UBERON:0001020;4.70e-09;1!UBERON:0002437;4.70e-09;1!UBERON:0000125;1.52e-08;9!UBERON:0002308;1.52e-08;9!UBERON:0004573;1.65e-07;33!UBERON:0004571;1.65e-07;33!UBERON:0000073;7.49e-07;53!UBERON:0002616;7.49e-07;53 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;4.70e-09;1!DOID:3565;4.70e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,6.72e-09,1;DOID:3565,6.72e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.00e-21!57;UBERON:0005068!6.00e-21!57;UBERON:0006241!6.00e-21!57;UBERON:0007135!6.00e-21!57;UBERON:0002616!1.84e-19!59;UBERON:0001017!1.28e-15!82;UBERON:0000955!1.55e-15!69;UBERON:0006238!1.55e-15!69;UBERON:0002780!6.36e-15!41;UBERON:0001890!6.36e-15!41;UBERON:0006240!6.36e-15!41;UBERON:0003075!1.52e-14!86;UBERON:0007284!1.52e-14!86;UBERON:0003080!2.36e-14!42;UBERON:0005743!3.03e-14!86;UBERON:0002346!3.64e-14!90;UBERON:0000073!8.32e-14!94;UBERON:0001016!8.32e-14!94;UBERON:0002020!2.60e-13!34;UBERON:0003528!2.60e-13!34;UBERON:0001893!3.25e-13!34;UBERON:0002791!1.83e-12!33;UBERON:0001869!2.60e-11!32;UBERON:0000119!2.73e-11!312;UBERON:0000483!2.93e-11!309;UBERON:0003056!1.93e-10!61;UBERON:0007023!2.10e-10!115;UBERON:0001134!1.78e-09!61;UBERON:0002036!1.78e-09!61;UBERON:0003082!1.78e-09!61;UBERON:0000475!2.27e-09!365;UBERON:0000025!2.92e-09!194;UBERON:0002619!6.54e-09!22;UBERON:0002385!6.90e-09!63;UBERON:0001015!6.90e-09!63;UBERON:0000383!6.90e-09!63;UBERON:0001950!9.09e-09!20;UBERON:0002308!1.44e-08!9;UBERON:0000125!1.44e-08!9;UBERON:0004111!2.68e-08!241;UBERON:0003076!5.64e-08!15;UBERON:0003057!5.64e-08!15;UBERON:0000033!6.57e-08!123;UBERON:0002298!6.93e-08!8;UBERON:0004290!1.08e-07!70;UBERON:0000477!1.96e-07!286;UBERON:0000914!2.11e-07!83;UBERON:0002329!2.11e-07!83;UBERON:0003077!2.11e-07!83;UBERON:0003059!2.11e-07!83;UBERON:0007282!2.11e-07!83;UBERON:0009618!2.11e-07!83;UBERON:0007285!2.11e-07!83;UBERON:0000956!2.37e-07!25;UBERON:0000203!2.37e-07!25;UBERON:0000153!5.56e-07!129;UBERON:0007811!5.56e-07!129;UBERON:0000486!6.65e-07!82;UBERON:0004733!7.90e-07!12;UBERON:0002028!7.90e-07!12;UBERON:0007277!7.90e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;1.86e-14;5!UBERON:0001533;1.86e-14;5!UBERON:0003513;1.76e-10;7!UBERON:0002038;1.60e-09;1!UBERON:0009661;1.60e-09;1!UBERON:0002950;1.60e-09;1!UBERON:0001891;1.60e-09;1!UBERON:0002336;4.70e-09;1!UBERON:0011215;4.70e-09;1!UBERON:0001018;4.70e-09;1!UBERON:0002473;4.70e-09;1!UBERON:0005340;4.70e-09;1!UBERON:0003544;4.70e-09;1!UBERON:0005970;4.70e-09;1!UBERON:0002316;4.70e-09;1!UBERON:0001020;4.70e-09;1!UBERON:0002437;4.70e-09;1!UBERON:0000125;1.52e-08;9!UBERON:0002308;1.52e-08;9!UBERON:0004573;1.65e-07;33!UBERON:0004571;1.65e-07;33!UBERON:0000073;7.49e-07;53!UBERON:0002616;7.49e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,1.00e-14,5;UBERON:0001533,1.00e-14,5;UBERON:0003513,1.14e-10,7;UBERON:0002038,1.60e-09,1;UBERON:0009661,1.60e-09,1;UBERON:0002950,1.60e-09,1;UBERON:0001891,1.60e-09,1;UBERON:0009616,1.60e-09,1;UBERON:0010286,1.60e-09,1;UBERON:0002336,2.60e-09,1;UBERON:0011215,2.60e-09,1;UBERON:0001018,2.60e-09,1;UBERON:0002473,2.60e-09,1;UBERON:0005340,2.60e-09,1;UBERON:0003544,2.60e-09,1;UBERON:0005970,2.60e-09,1;UBERON:0002316,2.60e-09,1;UBERON:0001020,2.60e-09,1;UBERON:0002437,2.60e-09,1;UBERON:0000125,1.23e-08,9;UBERON:0002308,1.23e-08,9;UBERON:0000073,2.97e-08,53;UBERON:0002616,2.97e-08,53;UBERON:0004573,5.55e-08,33;UBERON:0004571,5.55e-08,33;UBERON:0001049,9.22e-08,56;UBERON:0005068,9.22e-08,56;UBERON:0006241,9.22e-08,56;UBERON:0007135,9.22e-08,56 | |||
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| ||
|short_description=p@chr15:71147072..71147098,- | |short_description=p@chr15:71147072..71147098,- | ||
}} | }} |
Latest revision as of 03:53, 25 July 2015
Short description: | p@chr15:71147072..71147098, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:71147072..71147098, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.00e-14 | 5 |
meningothelial cell | 6.72e-09 | 1 |
vascular associated smooth muscle cell | 3.01e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 1.00e-14 | 5 |
subclavian artery | 1.00e-14 | 5 |
trunk blood vessel | 1.14e-10 | 7 |
substantia nigra | 1.60e-09 | 1 |
midbrain nucleus | 1.60e-09 | 1 |
regional part of midbrain | 1.60e-09 | 1 |
midbrain | 1.60e-09 | 1 |
presumptive midbrain | 1.60e-09 | 1 |
midbrain neural tube | 1.60e-09 | 1 |
corpus callosum | 2.60e-09 | 1 |
central nervous system cell part cluster | 2.60e-09 | 1 |
axon tract | 2.60e-09 | 1 |
intercerebral commissure | 2.60e-09 | 1 |
dorsal telencephalic commissure | 2.60e-09 | 1 |
brain white matter | 2.60e-09 | 1 |
brain commissure | 2.60e-09 | 1 |
white matter | 2.60e-09 | 1 |
nervous system commissure | 2.60e-09 | 1 |
cerebral hemisphere white matter | 2.60e-09 | 1 |
neural nucleus | 1.23e-08 | 9 |
nucleus of brain | 1.23e-08 | 9 |
regional part of nervous system | 2.97e-08 | 53 |
regional part of brain | 2.97e-08 | 53 |
systemic artery | 5.55e-08 | 33 |
systemic arterial system | 5.55e-08 | 33 |
neural tube | 9.22e-08 | 56 |
neural rod | 9.22e-08 | 56 |
future spinal cord | 9.22e-08 | 56 |
neural keel | 9.22e-08 | 56 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 6.72e-09 | 1 |
meningioma | 6.72e-09 | 1 |